EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000009597 (Gene tree)
Gene ID: -
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 28294 bases
Position: chrGeneScaffold_1332:468024-496317
Accession: 25734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000008930	MRP-S27	PF10037.9	8.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000009596	PTCD2-201	1158	-	ENSVPAP00000008930	385 (aa)	-	UPI00018BEC38

Gene Model

Click here to download ENSVPAG00000009597's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000009597's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000009597	PTCD2	99	81.137	ENSG00000049883	PTCD2	100	81.281	Homo_sapiens
ENSVPAG00000009597	PTCD2	89	45.977	ENSAPOG00000020682	ptcd2	91	45.977	Acanthochromis_polyacanthus
ENSVPAG00000009597	PTCD2	99	80.928	ENSAMEG00000007194	PTCD2	99	80.928	Ailuropoda_melanoleuca
ENSVPAG00000009597	PTCD2	89	41.547	ENSACIG00000002053	ptcd2	100	41.547	Amphilophus_citrinellus
ENSVPAG00000009597	PTCD2	89	45.402	ENSAOCG00000006616	ptcd2	89	45.402	Amphiprion_ocellaris
ENSVPAG00000009597	PTCD2	89	45.429	ENSAPEG00000022926	ptcd2	89	45.429	Amphiprion_percula
ENSVPAG00000009597	PTCD2	91	56.780	ENSACAG00000009747	PTCD2	91	56.780	Anolis_carolinensis
ENSVPAG00000009597	PTCD2	99	81.395	ENSANAG00000029353	PTCD2	99	81.395	Aotus_nancymaae
ENSVPAG00000009597	PTCD2	89	44.253	ENSACLG00000027742	ptcd2	89	44.253	Astatotilapia_calliptera
ENSVPAG00000009597	PTCD2	84	42.462	ENSAMXG00000029404	ptcd2	88	42.462	Astyanax_mexicanus
ENSVPAG00000009597	PTCD2	99	84.896	ENSBTAG00000014675	PTCD2	100	84.896	Bos_taurus
ENSVPAG00000009597	PTCD2	99	80.879	ENSCJAG00000016364	PTCD2	99	80.879	Callithrix_jacchus
ENSVPAG00000009597	PTCD2	99	79.275	ENSCAFG00000007982	PTCD2	90	79.275	Canis_familiaris
ENSVPAG00000009597	PTCD2	89	81.792	ENSCAFG00020019147	PTCD2	97	81.792	Canis_lupus_dingo
ENSVPAG00000009597	PTCD2	99	85.417	ENSCHIG00000017118	PTCD2	100	85.417	Capra_hircus
ENSVPAG00000009597	PTCD2	99	72.396	ENSCPOG00000040168	PTCD2	100	72.396	Cavia_porcellus
ENSVPAG00000009597	PTCD2	99	80.103	ENSCCAG00000029389	-	99	80.103	Cebus_capucinus
ENSVPAG00000009597	PTCD2	82	74.062	ENSCCAG00000021996	-	98	74.062	Cebus_capucinus
ENSVPAG00000009597	PTCD2	99	78.906	ENSCATG00000019069	PTCD2	100	78.906	Cercocebus_atys
ENSVPAG00000009597	PTCD2	99	72.135	ENSCLAG00000000072	PTCD2	100	72.135	Chinchilla_lanigera
ENSVPAG00000009597	PTCD2	99	79.167	ENSCSAG00000015623	PTCD2	100	79.167	Chlorocebus_sabaeus
ENSVPAG00000009597	PTCD2	89	58.046	ENSCHOG00000010634	PTCD2	100	58.046	Choloepus_hoffmanni
ENSVPAG00000009597	PTCD2	99	51.804	ENSCPBG00000000216	PTCD2	99	51.804	Chrysemys_picta_bellii
ENSVPAG00000009597	PTCD2	99	79.070	ENSCANG00000035636	PTCD2	99	79.070	Colobus_angolensis_palliatus
ENSVPAG00000009597	PTCD2	100	69.923	ENSCGRG00001015289	Ptcd2	85	69.923	Cricetulus_griseus_chok1gshd
ENSVPAG00000009597	PTCD2	100	69.923	ENSCGRG00000006193	Ptcd2	85	69.923	Cricetulus_griseus_crigri
ENSVPAG00000009597	PTCD2	89	43.966	ENSCVAG00000001285	ptcd2	89	43.966	Cyprinodon_variegatus
ENSVPAG00000009597	PTCD2	96	42.933	ENSDARG00000035391	ptcd2	97	42.933	Danio_rerio
ENSVPAG00000009597	PTCD2	99	76.042	ENSDNOG00000008719	PTCD2	100	76.042	Dasypus_novemcinctus
ENSVPAG00000009597	PTCD2	99	75.773	ENSDORG00000004921	Ptcd2	100	75.773	Dipodomys_ordii
ENSVPAG00000009597	PTCD2	100	70.000	ENSETEG00000016542	PTCD2	100	70.000	Echinops_telfairi
ENSVPAG00000009597	PTCD2	99	82.292	ENSEASG00005018038	PTCD2	100	82.292	Equus_asinus_asinus
ENSVPAG00000009597	PTCD2	99	82.338	ENSECAG00000007022	PTCD2	99	82.338	Equus_caballus
ENSVPAG00000009597	PTCD2	99	74.026	ENSEEUG00000014031	PTCD2	99	74.026	Erinaceus_europaeus
ENSVPAG00000009597	PTCD2	91	48.023	ENSELUG00000003584	ptcd2	92	48.023	Esox_lucius
ENSVPAG00000009597	PTCD2	100	73.522	ENSFCAG00000045432	PTCD2	84	73.522	Felis_catus
ENSVPAG00000009597	PTCD2	84	48.930	ENSFALG00000010299	PTCD2	99	48.930	Ficedula_albicollis
ENSVPAG00000009597	PTCD2	100	72.751	ENSFDAG00000018461	PTCD2	99	72.751	Fukomys_damarensis
ENSVPAG00000009597	PTCD2	89	49.003	ENSGMOG00000003637	ptcd2	91	49.003	Gadus_morhua
ENSVPAG00000009597	PTCD2	91	48.305	ENSGALG00000038260	PTCD2	93	48.305	Gallus_gallus
ENSVPAG00000009597	PTCD2	99	53.866	ENSGAGG00000021952	PTCD2	99	53.866	Gopherus_agassizii
ENSVPAG00000009597	PTCD2	99	80.879	ENSGGOG00000010695	PTCD2	99	80.879	Gorilla_gorilla
ENSVPAG00000009597	PTCD2	89	44.540	ENSHBUG00000009191	ptcd2	89	44.540	Haplochromis_burtoni
ENSVPAG00000009597	PTCD2	99	74.219	ENSHGLG00000001234	PTCD2	100	74.219	Heterocephalus_glaber_female
ENSVPAG00000009597	PTCD2	99	74.479	ENSHGLG00100015419	PTCD2	100	74.479	Heterocephalus_glaber_male
ENSVPAG00000009597	PTCD2	89	45.714	ENSHCOG00000001703	ptcd2	90	45.714	Hippocampus_comes
ENSVPAG00000009597	PTCD2	86	42.687	ENSIPUG00000006080	ptcd2	91	43.553	Ictalurus_punctatus
ENSVPAG00000009597	PTCD2	98	79.373	ENSSTOG00000006596	PTCD2	99	79.373	Ictidomys_tridecemlineatus
ENSVPAG00000009597	PTCD2	99	76.562	ENSJJAG00000024388	Ptcd2	100	76.562	Jaculus_jaculus
ENSVPAG00000009597	PTCD2	92	41.274	ENSKMAG00000009329	ptcd2	93	41.274	Kryptolebias_marmoratus
ENSVPAG00000009597	PTCD2	89	44.798	ENSLBEG00000024871	ptcd2	88	44.798	Labrus_bergylta
ENSVPAG00000009597	PTCD2	92	52.778	ENSLOCG00000011122	ptcd2	94	52.778	Lepisosteus_oculatus
ENSVPAG00000009597	PTCD2	80	79.743	ENSLAFG00000004115	PTCD2	99	79.743	Loxodonta_africana
ENSVPAG00000009597	PTCD2	99	78.811	ENSMFAG00000031516	PTCD2	99	78.811	Macaca_fascicularis
ENSVPAG00000009597	PTCD2	99	78.646	ENSMNEG00000007537	PTCD2	100	78.646	Macaca_nemestrina
ENSVPAG00000009597	PTCD2	99	79.070	ENSMLEG00000031093	PTCD2	99	79.070	Mandrillus_leucophaeus
ENSVPAG00000009597	PTCD2	89	46.552	ENSMAMG00000018529	ptcd2	91	46.552	Mastacembelus_armatus
ENSVPAG00000009597	PTCD2	89	44.253	ENSMZEG00005003625	ptcd2	89	44.253	Maylandia_zebra
ENSVPAG00000009597	PTCD2	89	47.989	ENSMGAG00000005033	PTCD2	100	47.989	Meleagris_gallopavo
ENSVPAG00000009597	PTCD2	99	55.208	ENSMAUG00000020253	Ptcd2	100	55.208	Mesocricetus_auratus
ENSVPAG00000009597	PTCD2	99	80.000	ENSMICG00000004535	PTCD2	99	80.000	Microcebus_murinus
ENSVPAG00000009597	PTCD2	99	71.875	ENSMOCG00000019985	Ptcd2	100	71.875	Microtus_ochrogaster
ENSVPAG00000009597	PTCD2	99	55.469	ENSMODG00000001695	PTCD2	100	55.469	Monodelphis_domestica
ENSVPAG00000009597	PTCD2	89	47.701	ENSMALG00000022372	ptcd2	91	47.701	Monopterus_albus
ENSVPAG00000009597	PTCD2	99	70.833	MGP_CAROLIEiJ_G0018829	Ptcd2	100	70.833	Mus_caroli
ENSVPAG00000009597	PTCD2	99	70.052	ENSMUSG00000021650	Ptcd2	100	70.052	Mus_musculus
ENSVPAG00000009597	PTCD2	99	73.177	MGP_PahariEiJ_G0015904	Ptcd2	100	73.177	Mus_pahari
ENSVPAG00000009597	PTCD2	99	70.573	MGP_SPRETEiJ_G0019711	Ptcd2	100	70.573	Mus_spretus
ENSVPAG00000009597	PTCD2	99	81.510	ENSMPUG00000014401	PTCD2	100	81.510	Mustela_putorius_furo
ENSVPAG00000009597	PTCD2	100	80.977	ENSMLUG00000007374	PTCD2	100	80.977	Myotis_lucifugus
ENSVPAG00000009597	PTCD2	98	73.298	ENSNGAG00000005027	Ptcd2	99	73.298	Nannospalax_galili
ENSVPAG00000009597	PTCD2	85	43.939	ENSNBRG00000000092	-	100	43.939	Neolamprologus_brichardi
ENSVPAG00000009597	PTCD2	89	44.540	ENSNBRG00000008174	ptcd2	91	44.540	Neolamprologus_brichardi
ENSVPAG00000009597	PTCD2	99	80.103	ENSNLEG00000004516	PTCD2	99	80.103	Nomascus_leucogenys
ENSVPAG00000009597	PTCD2	77	51.667	ENSMEUG00000014012	-	82	50.799	Notamacropus_eugenii
ENSVPAG00000009597	PTCD2	99	72.165	ENSOPRG00000007290	PTCD2	99	72.165	Ochotona_princeps
ENSVPAG00000009597	PTCD2	99	75.000	ENSODEG00000016417	PTCD2	100	75.000	Octodon_degus
ENSVPAG00000009597	PTCD2	74	46.367	ENSONIG00000011269	ptcd2	85	46.367	Oreochromis_niloticus
ENSVPAG00000009597	PTCD2	94	79.121	ENSOCUG00000007970	PTCD2	100	78.125	Oryctolagus_cuniculus
ENSVPAG00000009597	PTCD2	89	44.828	ENSORLG00000003851	ptcd2	89	44.828	Oryzias_latipes
ENSVPAG00000009597	PTCD2	89	44.253	ENSORLG00020009823	ptcd2	91	44.253	Oryzias_latipes_hni
ENSVPAG00000009597	PTCD2	90	44.000	ENSORLG00015016777	ptcd2	99	44.000	Oryzias_latipes_hsok
ENSVPAG00000009597	PTCD2	97	40.500	ENSOMEG00000012396	ptcd2	96	40.500	Oryzias_melastigma
ENSVPAG00000009597	PTCD2	99	74.677	ENSOGAG00000008390	PTCD2	99	74.677	Otolemur_garnettii
ENSVPAG00000009597	PTCD2	100	85.090	ENSOARG00000005087	PTCD2	100	85.090	Ovis_aries
ENSVPAG00000009597	PTCD2	99	80.879	ENSPPAG00000028480	PTCD2	99	80.879	Pan_paniscus
ENSVPAG00000009597	PTCD2	99	80.362	ENSPTRG00000016968	PTCD2	99	80.362	Pan_troglodytes
ENSVPAG00000009597	PTCD2	89	80.870	ENSPANG00000006611	PTCD2	89	80.870	Papio_anubis
ENSVPAG00000009597	PTCD2	91	46.348	ENSPKIG00000019896	ptcd2	93	46.348	Paramormyrops_kingsleyae
ENSVPAG00000009597	PTCD2	82	55.975	ENSPSIG00000014559	PTCD2	98	55.975	Pelodiscus_sinensis
ENSVPAG00000009597	PTCD2	99	72.021	ENSPEMG00000000884	Ptcd2	100	72.021	Peromyscus_maniculatus_bairdii
ENSVPAG00000009597	PTCD2	99	58.333	ENSPCIG00000029047	PTCD2	100	58.333	Phascolarctos_cinereus
ENSVPAG00000009597	PTCD2	84	43.731	ENSPLAG00000010456	ptcd2	91	43.678	Poecilia_latipinna
ENSVPAG00000009597	PTCD2	89	43.966	ENSPREG00000021797	ptcd2	88	43.966	Poecilia_reticulata
ENSVPAG00000009597	PTCD2	99	69.948	ENSPPYG00000015543	PTCD2	99	69.948	Pongo_abelii
ENSVPAG00000009597	PTCD2	81	66.349	ENSPCAG00000006806	PTCD2	100	66.349	Procavia_capensis
ENSVPAG00000009597	PTCD2	100	83.290	ENSPVAG00000010935	PTCD2	100	83.290	Pteropus_vampyrus
ENSVPAG00000009597	PTCD2	89	44.253	ENSPNYG00000003122	ptcd2	89	44.253	Pundamilia_nyererei
ENSVPAG00000009597	PTCD2	92	46.409	ENSPNAG00000021490	ptcd2	94	46.685	Pygocentrus_nattereri
ENSVPAG00000009597	PTCD2	99	72.135	ENSRNOG00000028403	Ptcd2	100	72.135	Rattus_norvegicus
ENSVPAG00000009597	PTCD2	99	74.805	ENSRBIG00000032929	PTCD2	99	74.805	Rhinopithecus_bieti
ENSVPAG00000009597	PTCD2	99	79.167	ENSRROG00000000080	PTCD2	100	79.167	Rhinopithecus_roxellana
ENSVPAG00000009597	PTCD2	99	79.167	ENSSBOG00000018911	PTCD2	100	79.167	Saimiri_boliviensis_boliviensis
ENSVPAG00000009597	PTCD2	92	60.615	ENSSHAG00000003833	PTCD2	93	60.615	Sarcophilus_harrisii
ENSVPAG00000009597	PTCD2	92	43.575	ENSSFOG00015015415	ptcd2	93	43.575	Scleropages_formosus
ENSVPAG00000009597	PTCD2	89	42.939	ENSSMAG00000010350	ptcd2	90	42.939	Scophthalmus_maximus
ENSVPAG00000009597	PTCD2	89	47.262	ENSSDUG00000008142	ptcd2	87	47.262	Seriola_dumerili
ENSVPAG00000009597	PTCD2	89	47.414	ENSSLDG00000015284	ptcd2	91	47.414	Seriola_lalandi_dorsalis
ENSVPAG00000009597	PTCD2	81	69.427	ENSSARG00000004983	PTCD2	100	69.427	Sorex_araneus
ENSVPAG00000009597	PTCD2	99	51.302	ENSSPUG00000000176	PTCD2	96	51.302	Sphenodon_punctatus
ENSVPAG00000009597	PTCD2	96	41.985	ENSSPAG00000008591	ptcd2	100	41.985	Stegastes_partitus
ENSVPAG00000009597	PTCD2	100	86.632	ENSSSCG00000016975	PTCD2	91	86.632	Sus_scrofa
ENSVPAG00000009597	PTCD2	89	47.977	ENSTGUG00000005705	PTCD2	99	47.977	Taeniopygia_guttata
ENSVPAG00000009597	PTCD2	99	76.546	ENSTBEG00000016559	PTCD2	99	76.546	Tupaia_belangeri
ENSVPAG00000009597	PTCD2	99	86.598	ENSTTRG00000011851	PTCD2	99	86.598	Tursiops_truncatus
ENSVPAG00000009597	PTCD2	99	80.928	ENSUAMG00000007583	PTCD2	91	80.928	Ursus_americanus
ENSVPAG00000009597	PTCD2	99	80.729	ENSUMAG00000007666	PTCD2	100	80.729	Ursus_maritimus
ENSVPAG00000009597	PTCD2	96	80.376	ENSVVUG00000007299	-	97	80.376	Vulpes_vulpes
ENSVPAG00000009597	PTCD2	97	47.884	ENSXETG00000031652	PTCD2	98	47.884	Xenopus_tropicalis
ENSVPAG00000009597	PTCD2	84	43.731	ENSXMAG00000005940	ptcd2	82	43.391	Xiphophorus_maculatus