EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000009844 (Gene tree)
Gene ID: -
Gene Symbol: GAR1
Alias: NOLA1
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 7782 bases
Position: chrGeneScaffold_3280:877566-885347
Accession: 14264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000009160	Gar1	PF04410.14	2.3e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000009843	GAR1-201	714	-	ENSVPAP00000009160	237 (aa)	-	UPI00018BE72D

Gene Model

Click here to download ENSVPAG00000009844's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000009844's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000009844	GAR1	87	96.618	ENSAMEG00000004605	GAR1	100	96.618	Ailuropoda_melanoleuca
ENSVPAG00000009844	GAR1	88	97.630	ENSBTAG00000000748	GAR1	100	97.630	Bos_taurus
ENSVPAG00000009844	GAR1	62	91.892	ENSCAFG00000011503	GAR1	60	91.892	Canis_familiaris
ENSVPAG00000009844	GAR1	78	98.378	ENSCAFG00020015566	GAR1	96	98.378	Canis_lupus_dingo
ENSVPAG00000009844	GAR1	87	98.077	ENSCHIG00000016026	-	97	98.077	Capra_hircus
ENSVPAG00000009844	GAR1	61	79.167	ENSTSYG00000026632	-	56	90.826	Carlito_syrichta
ENSVPAG00000009844	GAR1	52	93.496	ENSCHOG00000007484	-	51	93.496	Choloepus_hoffmanni
ENSVPAG00000009844	GAR1	72	87.903	ENSCPBG00000004310	GAR1	66	83.969	Chrysemys_picta_bellii
ENSVPAG00000009844	GAR1	60	56.463	ENSCSAVG00000006355	-	75	56.463	Ciona_savignyi
ENSVPAG00000009844	GAR1	87	96.190	ENSEASG00005004658	GAR1	97	96.190	Equus_asinus_asinus
ENSVPAG00000009844	GAR1	87	96.667	ENSECAG00000013624	GAR1	97	96.667	Equus_caballus
ENSVPAG00000009844	GAR1	88	98.095	ENSFCAG00000040791	-	100	98.095	Felis_catus
ENSVPAG00000009844	GAR1	55	60.305	ENSFCAG00000025841	-	57	63.866	Felis_catus
ENSVPAG00000009844	GAR1	72	82.258	ENSGAGG00000004393	GAR1	80	89.256	Gopherus_agassizii
ENSVPAG00000009844	GAR1	57	86.607	ENSLACG00000003306	GAR1	65	87.037	Latimeria_chalumnae
ENSVPAG00000009844	GAR1	88	98.095	ENSMPUG00000008615	GAR1	100	98.095	Mustela_putorius_furo
ENSVPAG00000009844	GAR1	88	92.857	ENSMLUG00000003776	GAR1	100	92.857	Myotis_lucifugus
ENSVPAG00000009844	GAR1	58	74.453	ENSNLEG00000034282	-	55	82.569	Nomascus_leucogenys
ENSVPAG00000009844	GAR1	88	98.104	ENSOARG00000004910	GAR1	100	98.104	Ovis_aries
ENSVPAG00000009844	GAR1	88	98.095	ENSPPRG00000023697	GAR1	100	98.095	Panthera_pardus
ENSVPAG00000009844	GAR1	88	98.095	ENSPTIG00000021565	GAR1	100	98.095	Panthera_tigris_altaica
ENSVPAG00000009844	GAR1	69	63.804	ENSPTRG00000049340	-	68	79.577	Pan_troglodytes
ENSVPAG00000009844	GAR1	79	71.859	ENSPCAG00000015897	GAR1	90	65.842	Procavia_capensis
ENSVPAG00000009844	GAR1	79	94.764	ENSPCOG00000027049	GAR1	97	94.764	Propithecus_coquereli
ENSVPAG00000009844	GAR1	81	89.062	ENSPVAG00000005992	GAR1	80	88.542	Pteropus_vampyrus
ENSVPAG00000009844	GAR1	65	76.623	ENSSPUG00000008707	GAR1	61	91.743	Sphenodon_punctatus
ENSVPAG00000009844	GAR1	87	98.558	ENSSSCG00000009137	GAR1	99	98.558	Sus_scrofa
ENSVPAG00000009844	GAR1	65	88.189	ENSTRUG00000020580	gar1	83	84.211	Takifugu_rubripes
ENSVPAG00000009844	GAR1	70	92.216	ENSTTRG00000016318	GAR1	69	83.234	Tursiops_truncatus
ENSVPAG00000009844	GAR1	78	97.838	ENSUAMG00000005652	GAR1	96	97.838	Ursus_americanus
ENSVPAG00000009844	GAR1	88	96.667	ENSUMAG00000000776	GAR1	100	96.667	Ursus_maritimus
ENSVPAG00000009844	GAR1	88	96.698	ENSVVUG00000017612	GAR1	100	96.698	Vulpes_vulpes