EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000009887 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 10439 bases
Position: chrGeneScaffold_2797:15856-26294
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000009201	SMN	PF06003.12	1.3e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000009887	-	831	-	ENSVPAP00000009201	277 (aa)	-	UPI00018BC66B

Gene Model

Click here to download ENSVPAG00000009887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000009887's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000009887	-	96	75.655	ENSG00000205571	SMN2	85	92.188	Homo_sapiens
ENSVPAG00000009887	-	96	75.655	ENSG00000172062	SMN1	85	92.188	Homo_sapiens
ENSVPAG00000009887	-	62	82.609	ENSAPOG00000011324	smn1	91	49.042	Acanthochromis_polyacanthus
ENSVPAG00000009887	-	96	78.571	ENSAMEG00000003316	-	88	78.571	Ailuropoda_melanoleuca
ENSVPAG00000009887	-	92	47.529	ENSACIG00000019772	-	97	47.674	Amphilophus_citrinellus
ENSVPAG00000009887	-	61	82.609	ENSAOCG00000024444	smn1	91	49.425	Amphiprion_ocellaris
ENSVPAG00000009887	-	61	82.609	ENSAPEG00000016504	smn1	91	49.808	Amphiprion_percula
ENSVPAG00000009887	-	93	50.566	ENSATEG00000002182	smn1	52	77.778	Anabas_testudineus
ENSVPAG00000009887	-	68	45.854	ENSAPLG00000010912	-	92	49.468	Anas_platyrhynchos
ENSVPAG00000009887	-	65	73.333	ENSACAG00000010017	-	64	81.481	Anolis_carolinensis
ENSVPAG00000009887	-	70	96.296	ENSANAG00000032133	-	67	96.296	Aotus_nancymaae
ENSVPAG00000009887	-	61	86.957	ENSACLG00000007308	smn1	58	81.481	Astatotilapia_calliptera
ENSVPAG00000009887	-	60	80.000	ENSAMXG00000013884	smn1	92	46.538	Astyanax_mexicanus
ENSVPAG00000009887	-	96	74.532	ENSBTAG00000005743	SMN2	92	74.157	Bos_taurus
ENSVPAG00000009887	-	96	73.881	ENSCJAG00000016290	-	88	88.750	Callithrix_jacchus
ENSVPAG00000009887	-	96	77.068	ENSCAFG00000007812	SMN	92	77.068	Canis_familiaris
ENSVPAG00000009887	-	96	77.068	ENSCAFG00020019229	-	86	77.068	Canis_lupus_dingo
ENSVPAG00000009887	-	96	74.721	ENSCHIG00000015559	-	91	74.349	Capra_hircus
ENSVPAG00000009887	-	100	76.173	ENSTSYG00000012058	-	71	100.000	Carlito_syrichta
ENSVPAG00000009887	-	79	57.333	ENSCAPG00000011021	-	65	92.593	Cavia_aperea
ENSVPAG00000009887	-	100	70.251	ENSCPOG00000036973	-	91	70.787	Cavia_porcellus
ENSVPAG00000009887	-	100	70.070	ENSCPOG00000012328	-	92	70.588	Cavia_porcellus
ENSVPAG00000009887	-	96	73.684	ENSCCAG00000018127	-	88	88.750	Cebus_capucinus
ENSVPAG00000009887	-	96	75.655	ENSCATG00000037002	-	88	88.750	Cercocebus_atys
ENSVPAG00000009887	-	100	69.258	ENSCLAG00000000284	-	70	92.593	Chinchilla_lanigera
ENSVPAG00000009887	-	96	74.906	ENSCSAG00000015688	-	91	75.281	Chlorocebus_sabaeus
ENSVPAG00000009887	-	61	93.333	ENSCHOG00000007346	-	66	96.296	Choloepus_hoffmanni
ENSVPAG00000009887	-	100	56.429	ENSCPBG00000010968	-	93	59.127	Chrysemys_picta_bellii
ENSVPAG00000009887	-	100	71.071	ENSCANG00000033324	-	69	96.154	Colobus_angolensis_palliatus
ENSVPAG00000009887	-	96	75.849	ENSCANG00000038242	-	88	88.750	Colobus_angolensis_palliatus
ENSVPAG00000009887	-	100	51.986	ENSCGRG00001016998	-	90	53.208	Cricetulus_griseus_chok1gshd
ENSVPAG00000009887	-	100	71.942	ENSCGRG00001017959	-	92	72.932	Cricetulus_griseus_chok1gshd
ENSVPAG00000009887	-	100	71.942	ENSCGRG00000007698	Smn1	92	72.932	Cricetulus_griseus_crigri
ENSVPAG00000009887	-	94	41.379	ENSCSEG00000015227	smn1	94	44.444	Cynoglossus_semilaevis
ENSVPAG00000009887	-	61	82.609	ENSCVAG00000007498	smn1	60	77.778	Cyprinodon_variegatus
ENSVPAG00000009887	-	94	46.970	ENSDARG00000018494	smn1	92	48.077	Danio_rerio
ENSVPAG00000009887	-	81	71.239	ENSDNOG00000007283	-	94	71.239	Dasypus_novemcinctus
ENSVPAG00000009887	-	56	78.205	ENSDNOG00000045949	-	67	78.289	Dasypus_novemcinctus
ENSVPAG00000009887	-	96	66.415	ENSDORG00000007082	Smn1	93	66.415	Dipodomys_ordii
ENSVPAG00000009887	-	61	70.238	ENSETEG00000001406	-	75	70.513	Echinops_telfairi
ENSVPAG00000009887	-	67	56.364	ENSEBUG00000011902	smn1	57	80.952	Eptatretus_burgeri
ENSVPAG00000009887	-	98	68.478	ENSEASG00005018000	-	89	71.825	Equus_asinus_asinus
ENSVPAG00000009887	-	95	76.404	ENSECAG00000015215	-	92	76.404	Equus_caballus
ENSVPAG00000009887	-	90	67.871	ENSEEUG00000015777	-	100	67.871	Erinaceus_europaeus
ENSVPAG00000009887	-	93	49.624	ENSELUG00000018067	smn1	91	48.837	Esox_lucius
ENSVPAG00000009887	-	100	77.778	ENSFCAG00000028292	SMN	71	100.000	Felis_catus
ENSVPAG00000009887	-	90	55.159	ENSFALG00000012320	-	88	55.556	Ficedula_albicollis
ENSVPAG00000009887	-	100	69.611	ENSFDAG00000017683	-	91	70.111	Fukomys_damarensis
ENSVPAG00000009887	-	55	82.609	ENSFHEG00000018508	smn1	56	77.778	Fundulus_heteroclitus
ENSVPAG00000009887	-	97	46.269	ENSGMOG00000017279	smn1	89	45.627	Gadus_morhua
ENSVPAG00000009887	-	93	55.185	ENSGALG00000002430	SMN	92	56.538	Gallus_gallus
ENSVPAG00000009887	-	55	82.609	ENSGAFG00000009501	smn1	63	77.778	Gambusia_affinis
ENSVPAG00000009887	-	61	80.952	ENSGACG00000010584	smn1	88	49.808	Gasterosteus_aculeatus
ENSVPAG00000009887	-	97	54.945	ENSGAGG00000011374	-	91	58.935	Gopherus_agassizii
ENSVPAG00000009887	-	66	100.000	ENSGGOG00000003872	-	74	100.000	Gorilla_gorilla
ENSVPAG00000009887	-	56	87.821	ENSGGOG00000026704	-	73	87.821	Gorilla_gorilla
ENSVPAG00000009887	-	61	86.957	ENSHBUG00000013987	smn1	61	81.481	Haplochromis_burtoni
ENSVPAG00000009887	-	100	65.714	ENSHGLG00000001905	-	92	69.318	Heterocephalus_glaber_female
ENSVPAG00000009887	-	99	69.892	ENSHGLG00000001018	-	91	70.111	Heterocephalus_glaber_female
ENSVPAG00000009887	-	100	68.345	ENSHGLG00100018676	-	96	69.318	Heterocephalus_glaber_male
ENSVPAG00000009887	-	99	69.892	ENSHGLG00100011252	-	91	70.111	Heterocephalus_glaber_male
ENSVPAG00000009887	-	93	49.237	ENSHCOG00000017136	smn1	59	76.000	Hippocampus_comes
ENSVPAG00000009887	-	62	81.481	ENSIPUG00000012580	smn1	55	81.481	Ictalurus_punctatus
ENSVPAG00000009887	-	95	75.758	ENSSTOG00000012288	-	96	75.940	Ictidomys_tridecemlineatus
ENSVPAG00000009887	-	52	62.069	ENSJJAG00000014853	-	72	62.585	Jaculus_jaculus
ENSVPAG00000009887	-	61	82.609	ENSKMAG00000007239	smn1	93	48.606	Kryptolebias_marmoratus
ENSVPAG00000009887	-	93	47.925	ENSLBEG00000022550	smn1	91	48.855	Labrus_bergylta
ENSVPAG00000009887	-	94	33.333	ENSLACG00000009808	-	51	39.355	Latimeria_chalumnae
ENSVPAG00000009887	-	93	48.077	ENSLOCG00000011339	smn1	68	74.074	Lepisosteus_oculatus
ENSVPAG00000009887	-	100	74.823	ENSLAFG00000003425	-	65	100.000	Loxodonta_africana
ENSVPAG00000009887	-	96	70.412	ENSMFAG00000008812	-	91	70.412	Macaca_fascicularis
ENSVPAG00000009887	-	96	76.030	ENSMFAG00000031523	SMN1	88	90.000	Macaca_fascicularis
ENSVPAG00000009887	-	96	76.030	ENSMMUG00000020214	SMN1	88	90.000	Macaca_mulatta
ENSVPAG00000009887	-	96	69.663	ENSMMUG00000030594	-	91	69.663	Macaca_mulatta
ENSVPAG00000009887	-	74	57.971	ENSMNEG00000036423	-	81	58.454	Macaca_nemestrina
ENSVPAG00000009887	-	96	76.030	ENSMNEG00000035094	-	88	90.000	Macaca_nemestrina
ENSVPAG00000009887	-	96	76.030	ENSMLEG00000041902	-	88	88.750	Mandrillus_leucophaeus
ENSVPAG00000009887	-	61	80.000	ENSMAMG00000011034	smn1	59	80.000	Mastacembelus_armatus
ENSVPAG00000009887	-	61	86.957	ENSMZEG00005013634	smn1	61	81.481	Maylandia_zebra
ENSVPAG00000009887	-	68	46.970	ENSMGAG00000008889	-	90	48.947	Meleagris_gallopavo
ENSVPAG00000009887	-	100	69.784	ENSMAUG00000010262	Smn1	91	71.212	Mesocricetus_auratus
ENSVPAG00000009887	-	83	70.259	ENSMICG00000034708	-	70	87.821	Microcebus_murinus
ENSVPAG00000009887	-	100	69.424	ENSMOCG00000017833	Smn1	92	70.301	Microtus_ochrogaster
ENSVPAG00000009887	-	62	82.609	ENSMMOG00000005504	smn1	66	77.778	Mola_mola
ENSVPAG00000009887	-	97	60.000	ENSMODG00000001436	-	91	60.075	Monodelphis_domestica
ENSVPAG00000009887	-	61	82.609	ENSMALG00000008025	smn1	91	49.618	Monopterus_albus
ENSVPAG00000009887	-	100	71.685	MGP_CAROLIEiJ_G0018836	Smn1	91	73.585	Mus_caroli
ENSVPAG00000009887	-	100	71.326	ENSMUSG00000021645	Smn1	91	73.208	Mus_musculus
ENSVPAG00000009887	-	100	71.480	MGP_PahariEiJ_G0015911	Smn1	91	73.004	Mus_pahari
ENSVPAG00000009887	-	100	70.968	MGP_SPRETEiJ_G0019718	Smn1	91	72.830	Mus_spretus
ENSVPAG00000009887	-	100	78.853	ENSMPUG00000014470	-	95	79.401	Mustela_putorius_furo
ENSVPAG00000009887	-	100	75.524	ENSMLUG00000010603	-	92	75.524	Myotis_lucifugus
ENSVPAG00000009887	-	97	74.721	ENSNGAG00000019833	Smn1	92	74.812	Nannospalax_galili
ENSVPAG00000009887	-	61	86.957	ENSNBRG00000023000	smn1	91	50.388	Neolamprologus_brichardi
ENSVPAG00000009887	-	100	75.269	ENSNLEG00000004454	-	85	92.188	Nomascus_leucogenys
ENSVPAG00000009887	-	81	53.982	ENSMEUG00000011393	-	99	55.507	Notamacropus_eugenii
ENSVPAG00000009887	-	90	69.565	ENSOPRG00000002015	-	100	69.565	Ochotona_princeps
ENSVPAG00000009887	-	99	72.364	ENSODEG00000015976	-	94	72.659	Octodon_degus
ENSVPAG00000009887	-	61	86.957	ENSONIG00000011799	smn1	92	50.000	Oreochromis_niloticus
ENSVPAG00000009887	-	93	58.462	ENSOANG00000001626	-	91	60.000	Ornithorhynchus_anatinus
ENSVPAG00000009887	-	100	65.371	ENSOCUG00000025183	-	91	65.314	Oryctolagus_cuniculus
ENSVPAG00000009887	-	100	72.302	ENSOCUG00000017097	-	91	72.556	Oryctolagus_cuniculus
ENSVPAG00000009887	-	100	67.845	ENSOCUG00000026649	-	91	70.849	Oryctolagus_cuniculus
ENSVPAG00000009887	-	62	82.609	ENSORLG00000010552	smn1	60	77.778	Oryzias_latipes
ENSVPAG00000009887	-	66	75.676	ENSORLG00020007936	smn1	66	77.778	Oryzias_latipes_hni
ENSVPAG00000009887	-	62	82.609	ENSORLG00015022425	smn1	60	77.778	Oryzias_latipes_hsok
ENSVPAG00000009887	-	62	82.609	ENSOMEG00000007824	smn1	61	77.778	Oryzias_melastigma
ENSVPAG00000009887	-	96	65.314	ENSOGAG00000031414	-	94	65.314	Otolemur_garnettii
ENSVPAG00000009887	-	93	65.000	ENSOARG00000005425	-	95	70.385	Ovis_aries
ENSVPAG00000009887	-	96	75.281	ENSPPAG00000036640	-	85	92.188	Pan_paniscus
ENSVPAG00000009887	-	100	77.778	ENSPPRG00000005575	-	71	100.000	Panthera_pardus
ENSVPAG00000009887	-	100	77.500	ENSPTIG00000007745	-	71	100.000	Panthera_tigris_altaica
ENSVPAG00000009887	-	96	74.444	ENSPTRG00000016955	-	85	92.188	Pan_troglodytes
ENSVPAG00000009887	-	96	70.787	ENSPANG00000000253	-	91	71.161	Papio_anubis
ENSVPAG00000009887	-	100	75.627	ENSPANG00000013601	-	88	90.000	Papio_anubis
ENSVPAG00000009887	-	93	48.837	ENSPKIG00000011096	smn1	68	77.778	Paramormyrops_kingsleyae
ENSVPAG00000009887	-	92	53.788	ENSPSIG00000014787	-	84	54.340	Pelodiscus_sinensis
ENSVPAG00000009887	-	61	82.609	ENSPMGG00000012285	smn1	64	77.778	Periophthalmus_magnuspinnatus
ENSVPAG00000009887	-	69	59.259	ENSPMAG00000005004	smn1	88	37.692	Petromyzon_marinus
ENSVPAG00000009887	-	97	60.000	ENSPCIG00000025764	-	92	60.821	Phascolarctos_cinereus
ENSVPAG00000009887	-	93	49.434	ENSPFOG00000007786	smn1	63	77.778	Poecilia_formosa
ENSVPAG00000009887	-	93	49.811	ENSPLAG00000012071	smn1	63	77.778	Poecilia_latipinna
ENSVPAG00000009887	-	93	49.434	ENSPMEG00000017085	smn1	63	77.778	Poecilia_mexicana
ENSVPAG00000009887	-	93	50.189	ENSPREG00000005824	smn1	63	77.778	Poecilia_reticulata
ENSVPAG00000009887	-	67	77.083	ENSPPYG00000019189	-	83	80.769	Pongo_abelii
ENSVPAG00000009887	-	91	73.123	ENSPPYG00000015533	-	92	73.518	Pongo_abelii
ENSVPAG00000009887	-	90	70.196	ENSPCAG00000004187	-	94	69.804	Procavia_capensis
ENSVPAG00000009887	-	95	78.491	ENSPVAG00000005977	-	91	78.571	Pteropus_vampyrus
ENSVPAG00000009887	-	61	86.957	ENSPNYG00000014148	smn1	91	50.388	Pundamilia_nyererei
ENSVPAG00000009887	-	64	81.481	ENSPNAG00000014007	smn1	80	45.149	Pygocentrus_nattereri
ENSVPAG00000009887	-	99	71.014	ENSRNOG00000018067	Smn1	91	71.970	Rattus_norvegicus
ENSVPAG00000009887	-	70	96.154	ENSRBIG00000036775	-	90	63.910	Rhinopithecus_bieti
ENSVPAG00000009887	-	96	75.655	ENSRBIG00000037052	-	87	89.744	Rhinopithecus_bieti
ENSVPAG00000009887	-	96	75.655	ENSRROG00000039399	-	87	89.744	Rhinopithecus_roxellana
ENSVPAG00000009887	-	70	96.154	ENSRROG00000031088	-	70	96.154	Rhinopithecus_roxellana
ENSVPAG00000009887	-	87	66.000	ENSSBOG00000020112	-	87	66.400	Saimiri_boliviensis_boliviensis
ENSVPAG00000009887	-	96	72.830	ENSSBOG00000011665	-	88	87.500	Saimiri_boliviensis_boliviensis
ENSVPAG00000009887	-	97	60.000	ENSSHAG00000001499	-	94	58.238	Sarcophilus_harrisii
ENSVPAG00000009887	-	93	47.893	ENSSFOG00015015507	smn1	67	74.074	Scleropages_formosus
ENSVPAG00000009887	-	57	86.957	ENSSMAG00000007922	smn1	91	47.674	Scophthalmus_maximus
ENSVPAG00000009887	-	62	82.609	ENSSDUG00000018533	smn1	91	49.618	Seriola_dumerili
ENSVPAG00000009887	-	61	82.609	ENSSLDG00000021135	smn1	91	50.000	Seriola_lalandi_dorsalis
ENSVPAG00000009887	-	93	58.687	ENSSPUG00000000373	-	90	60.000	Sphenodon_punctatus
ENSVPAG00000009887	-	93	47.810	ENSSPAG00000004345	smn1	91	49.042	Stegastes_partitus
ENSVPAG00000009887	-	96	77.154	ENSSSCG00000016970	-	91	77.528	Sus_scrofa
ENSVPAG00000009887	-	96	57.736	ENSSSCG00000029127	-	74	92.593	Sus_scrofa
ENSVPAG00000009887	-	97	52.542	ENSTGUG00000001548	-	96	54.212	Taeniopygia_guttata
ENSVPAG00000009887	-	63	73.333	ENSTRUG00000000736	smn	63	76.000	Takifugu_rubripes
ENSVPAG00000009887	-	59	77.778	ENSTNIG00000009892	smn1	57	77.778	Tetraodon_nigroviridis
ENSVPAG00000009887	-	56	87.821	ENSTBEG00000002399	-	75	87.821	Tupaia_belangeri
ENSVPAG00000009887	-	66	100.000	ENSTTRG00000005080	-	90	75.564	Tursiops_truncatus
ENSVPAG00000009887	-	56	93.590	ENSUAMG00000024947	-	57	93.590	Ursus_americanus
ENSVPAG00000009887	-	96	79.323	ENSUMAG00000007842	-	69	79.323	Ursus_maritimus
ENSVPAG00000009887	-	96	77.068	ENSVVUG00000006934	-	92	77.068	Vulpes_vulpes
ENSVPAG00000009887	-	94	50.562	ENSXETG00000018189	smn2	90	52.060	Xenopus_tropicalis
ENSVPAG00000009887	-	56	82.609	ENSXMAG00000001521	smn1	61	77.778	Xiphophorus_maculatus