EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVPAG00000010041 (Gene tree)
Gene ID: -
Gene Symbol: PABPC4
Alias: APP-1|iPABP
Full Name: poly(A) binding protein cytoplasmic 4
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 17421 bases
Position: chrGeneScaffold_454:12780-30200
Accession: 8557
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000009344	RRM_1	PF00076.22	2.6e-51	1	3
ENSVPAP00000009344	RRM_1	PF00076.22	2.6e-51	2	3
ENSVPAP00000009344	RRM_1	PF00076.22	2.6e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000010043	PABPC4-201	1971	-	ENSVPAP00000009344	656 (aa)	-	UPI00018BD15E

Gene Model

Click here to download ENSVPAG00000010041's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000010041's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVPAG00000010041	PABPC4	54	78.440	ENSVPAG00000003865	PABPC1	73	78.440

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000010041	PABPC4	77	97.872	ENSG00000090621	PABPC4	98	100.000	Homo_sapiens
ENSVPAG00000010041	PABPC4	73	70.206	ENSAPOG00000001161	pabpc4	70	70.206	Acanthochromis_polyacanthus
ENSVPAG00000010041	PABPC4	63	58.065	ENSAMEG00000015083	-	59	58.065	Ailuropoda_melanoleuca
ENSVPAG00000010041	PABPC4	77	97.872	ENSAMEG00000011535	-	84	97.872	Ailuropoda_melanoleuca
ENSVPAG00000010041	PABPC4	73	70.501	ENSACIG00000023343	pabpc4	70	71.429	Amphilophus_citrinellus
ENSVPAG00000010041	PABPC4	73	70.206	ENSAOCG00000021529	pabpc4	69	80.645	Amphiprion_ocellaris
ENSVPAG00000010041	PABPC4	73	70.206	ENSAPEG00000019196	pabpc4	71	70.206	Amphiprion_percula
ENSVPAG00000010041	PABPC4	73	69.617	ENSATEG00000007402	pabpc4	70	69.617	Anabas_testudineus
ENSVPAG00000010041	PABPC4	73	71.681	ENSAPLG00000009729	-	79	71.681	Anas_platyrhynchos
ENSVPAG00000010041	PABPC4	54	83.486	ENSACAG00000002544	PABPC4	71	83.486	Anolis_carolinensis
ENSVPAG00000010041	PABPC4	77	97.872	ENSANAG00000025079	PABPC4	84	97.872	Aotus_nancymaae
ENSVPAG00000010041	PABPC4	73	70.796	ENSACLG00000019558	pabpc4	71	70.796	Astatotilapia_calliptera
ENSVPAG00000010041	PABPC4	73	61.176	ENSAMXG00000018779	pabpc4	71	66.667	Astyanax_mexicanus
ENSVPAG00000010041	PABPC4	77	96.429	ENSBTAG00000017125	PABPC4	83	96.429	Bos_taurus
ENSVPAG00000010041	PABPC4	51	48.503	ENSBTAG00000048536	-	98	48.503	Bos_taurus
ENSVPAG00000010041	PABPC4	77	97.163	ENSCJAG00000002512	-	84	97.163	Callithrix_jacchus
ENSVPAG00000010041	PABPC4	77	96.429	ENSCAFG00000003081	PABPC4	83	96.429	Canis_familiaris
ENSVPAG00000010041	PABPC4	77	97.872	ENSCAFG00020004161	PABPC4	84	97.872	Canis_lupus_dingo
ENSVPAG00000010041	PABPC4	77	98.582	ENSCHIG00000019398	-	84	98.582	Capra_hircus
ENSVPAG00000010041	PABPC4	64	87.302	ENSCHIG00000023385	-	84	87.302	Capra_hircus
ENSVPAG00000010041	PABPC4	77	96.454	ENSTSYG00000006532	PABPC4	84	96.454	Carlito_syrichta
ENSVPAG00000010041	PABPC4	77	97.163	ENSCAPG00000015984	PABPC4	84	97.163	Cavia_aperea
ENSVPAG00000010041	PABPC4	77	97.163	ENSCPOG00000009552	PABPC4	84	97.163	Cavia_porcellus
ENSVPAG00000010041	PABPC4	77	97.872	ENSCCAG00000037306	PABPC4	84	97.872	Cebus_capucinus
ENSVPAG00000010041	PABPC4	77	97.872	ENSCATG00000042164	PABPC4	84	97.872	Cercocebus_atys
ENSVPAG00000010041	PABPC4	77	95.745	ENSCLAG00000011899	PABPC4	84	95.745	Chinchilla_lanigera
ENSVPAG00000010041	PABPC4	77	97.872	ENSCSAG00000001135	PABPC4	84	97.872	Chlorocebus_sabaeus
ENSVPAG00000010041	PABPC4	73	73.156	ENSCPBG00000001038	PABPC4	79	73.156	Chrysemys_picta_bellii
ENSVPAG00000010041	PABPC4	76	97.163	ENSCANG00000034177	PABPC4	84	97.163	Colobus_angolensis_palliatus
ENSVPAG00000010041	PABPC4	73	94.326	ENSCGRG00001018166	Pabpc4	79	94.326	Cricetulus_griseus_chok1gshd
ENSVPAG00000010041	PABPC4	71	83.688	ENSCGRG00000009777	Pabpc4	78	83.688	Cricetulus_griseus_crigri
ENSVPAG00000010041	PABPC4	73	69.912	ENSCSEG00000000130	pabpc4	71	69.912	Cynoglossus_semilaevis
ENSVPAG00000010041	PABPC4	71	70.606	ENSCVAG00000019246	pabpc4	77	70.606	Cyprinodon_variegatus
ENSVPAG00000010041	PABPC4	73	70.882	ENSDARG00000059259	pabpc4	76	70.882	Danio_rerio
ENSVPAG00000010041	PABPC4	59	96.429	ENSDNOG00000018444	-	76	96.429	Dasypus_novemcinctus
ENSVPAG00000010041	PABPC4	77	96.429	ENSDORG00000011581	Pabpc4	83	96.429	Dipodomys_ordii
ENSVPAG00000010041	PABPC4	54	67.179	ENSETEG00000009172	-	64	67.179	Echinops_telfairi
ENSVPAG00000010041	PABPC4	68	100.000	ENSETEG00000018453	-	68	100.000	Echinops_telfairi
ENSVPAG00000010041	PABPC4	72	65.487	ENSEBUG00000000992	pabpc4	73	65.487	Eptatretus_burgeri
ENSVPAG00000010041	PABPC4	72	65.487	ENSEBUG00000013782	pabpc4	76	65.487	Eptatretus_burgeri
ENSVPAG00000010041	PABPC4	77	98.582	ENSEASG00005014119	PABPC4	84	98.582	Equus_asinus_asinus
ENSVPAG00000010041	PABPC4	77	98.582	ENSECAG00000009396	PABPC4	84	98.582	Equus_caballus
ENSVPAG00000010041	PABPC4	73	89.362	ENSEEUG00000002962	PABPC4	84	92.857	Erinaceus_europaeus
ENSVPAG00000010041	PABPC4	72	69.733	ENSELUG00000003195	pabpc4	78	69.527	Esox_lucius
ENSVPAG00000010041	PABPC4	77	98.582	ENSFCAG00000015254	-	84	98.582	Felis_catus
ENSVPAG00000010041	PABPC4	73	71.091	ENSFALG00000000543	PABPC4	79	71.091	Ficedula_albicollis
ENSVPAG00000010041	PABPC4	77	96.454	ENSFDAG00000020016	-	84	96.454	Fukomys_damarensis
ENSVPAG00000010041	PABPC4	54	75.000	ENSFDAG00000010581	-	70	75.000	Fukomys_damarensis
ENSVPAG00000010041	PABPC4	73	70.501	ENSFHEG00000007548	pabpc4	78	70.501	Fundulus_heteroclitus
ENSVPAG00000010041	PABPC4	73	68.824	ENSGMOG00000019025	pabpc4	78	68.824	Gadus_morhua
ENSVPAG00000010041	PABPC4	73	72.566	ENSGALG00000003800	PABPC4	79	72.566	Gallus_gallus
ENSVPAG00000010041	PABPC4	63	90.625	ENSGAFG00000018195	pabpc4	89	86.813	Gambusia_affinis
ENSVPAG00000010041	PABPC4	73	69.027	ENSGACG00000007179	pabpc4	78	69.027	Gasterosteus_aculeatus
ENSVPAG00000010041	PABPC4	73	72.861	ENSGAGG00000001888	PABPC4	79	72.861	Gopherus_agassizii
ENSVPAG00000010041	PABPC4	77	97.872	ENSGGOG00000004002	PABPC4	84	97.872	Gorilla_gorilla
ENSVPAG00000010041	PABPC4	73	70.796	ENSHBUG00000020206	pabpc4	71	70.796	Haplochromis_burtoni
ENSVPAG00000010041	PABPC4	77	97.163	ENSHGLG00000011162	PABPC4	84	97.163	Heterocephalus_glaber_female
ENSVPAG00000010041	PABPC4	77	96.429	ENSHGLG00100001580	PABPC4	83	96.429	Heterocephalus_glaber_male
ENSVPAG00000010041	PABPC4	73	69.912	ENSHCOG00000012694	pabpc4	67	80.000	Hippocampus_comes
ENSVPAG00000010041	PABPC4	73	70.796	ENSIPUG00000016620	pabpc4	78	70.796	Ictalurus_punctatus
ENSVPAG00000010041	PABPC4	77	96.429	ENSSTOG00000010416	PABPC4	83	96.429	Ictidomys_tridecemlineatus
ENSVPAG00000010041	PABPC4	77	96.429	ENSJJAG00000007781	Pabpc4	83	96.429	Jaculus_jaculus
ENSVPAG00000010041	PABPC4	73	70.501	ENSKMAG00000013597	pabpc4	74	70.501	Kryptolebias_marmoratus
ENSVPAG00000010041	PABPC4	73	70.000	ENSLBEG00000013654	pabpc4	70	70.370	Labrus_bergylta
ENSVPAG00000010041	PABPC4	73	71.976	ENSLACG00000011907	PABPC4	78	71.976	Latimeria_chalumnae
ENSVPAG00000010041	PABPC4	72	71.598	ENSLOCG00000001877	pabpc4	78	71.598	Lepisosteus_oculatus
ENSVPAG00000010041	PABPC4	77	99.291	ENSLAFG00000000151	PABPC4	84	99.291	Loxodonta_africana
ENSVPAG00000010041	PABPC4	77	97.872	ENSMFAG00000041481	PABPC4	84	97.872	Macaca_fascicularis
ENSVPAG00000010041	PABPC4	77	97.872	ENSMMUG00000007497	PABPC4	84	97.872	Macaca_mulatta
ENSVPAG00000010041	PABPC4	77	97.163	ENSMNEG00000043054	PABPC4	84	97.163	Macaca_nemestrina
ENSVPAG00000010041	PABPC4	77	97.872	ENSMLEG00000040716	PABPC4	84	97.872	Mandrillus_leucophaeus
ENSVPAG00000010041	PABPC4	73	69.912	ENSMAMG00000010025	pabpc4	74	69.912	Mastacembelus_armatus
ENSVPAG00000010041	PABPC4	73	70.501	ENSMZEG00005006141	pabpc4	69	77.419	Maylandia_zebra
ENSVPAG00000010041	PABPC4	54	84.862	ENSMGAG00000005408	PABPC4	77	84.862	Meleagris_gallopavo
ENSVPAG00000010041	PABPC4	73	92.308	ENSMICG00000016633	-	89	93.007	Microcebus_murinus
ENSVPAG00000010041	PABPC4	73	96.454	ENSMOCG00000006763	Pabpc4	79	96.454	Microtus_ochrogaster
ENSVPAG00000010041	PABPC4	51	70.206	ENSMMOG00000002363	pabpc4	68	76.471	Mola_mola
ENSVPAG00000010041	PABPC4	73	72.941	ENSMODG00000017657	-	80	72.941	Monodelphis_domestica
ENSVPAG00000010041	PABPC4	73	69.912	ENSMALG00000011017	pabpc4	77	69.912	Monopterus_albus
ENSVPAG00000010041	PABPC4	77	96.454	MGP_CAROLIEiJ_G0026435	-	84	96.454	Mus_caroli
ENSVPAG00000010041	PABPC4	77	97.872	ENSMUSG00000011257	Pabpc4	84	97.872	Mus_musculus
ENSVPAG00000010041	PABPC4	76	97.163	MGP_PahariEiJ_G0028765	Pabpc4	84	97.163	Mus_pahari
ENSVPAG00000010041	PABPC4	76	97.872	MGP_SPRETEiJ_G0027415	Pabpc4	86	97.872	Mus_spretus
ENSVPAG00000010041	PABPC4	77	98.582	ENSMPUG00000014414	-	84	98.582	Mustela_putorius_furo
ENSVPAG00000010041	PABPC4	77	92.857	ENSMLUG00000012068	PABPC4	83	92.857	Myotis_lucifugus
ENSVPAG00000010041	PABPC4	77	96.429	ENSNGAG00000018292	Pabpc4	83	96.429	Nannospalax_galili
ENSVPAG00000010041	PABPC4	50	60.096	ENSNBRG00000009708	pabpc4	98	60.096	Neolamprologus_brichardi
ENSVPAG00000010041	PABPC4	77	96.429	ENSNLEG00000011928	PABPC4	83	96.429	Nomascus_leucogenys
ENSVPAG00000010041	PABPC4	60	95.000	ENSOPRG00000011984	PABPC4	71	95.000	Ochotona_princeps
ENSVPAG00000010041	PABPC4	59	95.181	ENSODEG00000017434	-	77	95.181	Octodon_degus
ENSVPAG00000010041	PABPC4	77	95.745	ENSODEG00000006592	-	84	95.745	Octodon_degus
ENSVPAG00000010041	PABPC4	73	70.796	ENSONIG00000008176	pabpc4	71	70.796	Oreochromis_niloticus
ENSVPAG00000010041	PABPC4	73	71.976	ENSOANG00000010001	PABPC4	79	71.976	Ornithorhynchus_anatinus
ENSVPAG00000010041	PABPC4	73	97.163	ENSOCUG00000000562	PABPC4	73	97.163	Oryctolagus_cuniculus
ENSVPAG00000010041	PABPC4	73	69.912	ENSORLG00000017479	pabpc4	79	68.634	Oryzias_latipes
ENSVPAG00000010041	PABPC4	73	69.912	ENSORLG00020018644	pabpc4	69	80.000	Oryzias_latipes_hni
ENSVPAG00000010041	PABPC4	73	69.912	ENSORLG00015015042	pabpc4	79	68.634	Oryzias_latipes_hsok
ENSVPAG00000010041	PABPC4	73	70.206	ENSOMEG00000014410	pabpc4	77	70.206	Oryzias_melastigma
ENSVPAG00000010041	PABPC4	77	96.429	ENSOGAG00000004067	PABPC4	83	96.429	Otolemur_garnettii
ENSVPAG00000010041	PABPC4	77	98.582	ENSOARG00000020060	PABPC4	84	98.582	Ovis_aries
ENSVPAG00000010041	PABPC4	77	97.872	ENSPPAG00000043625	PABPC4	84	97.872	Pan_paniscus
ENSVPAG00000010041	PABPC4	77	98.582	ENSPPRG00000024727	PABPC4	84	98.582	Panthera_pardus
ENSVPAG00000010041	PABPC4	77	98.582	ENSPTIG00000005829	PABPC4	84	98.582	Panthera_tigris_altaica
ENSVPAG00000010041	PABPC4	77	97.872	ENSPTRG00000000573	PABPC4	84	97.872	Pan_troglodytes
ENSVPAG00000010041	PABPC4	77	98.582	ENSPANG00000009484	PABPC4	84	98.582	Papio_anubis
ENSVPAG00000010041	PABPC4	71	71.217	ENSPKIG00000025356	pabpc4	67	80.645	Paramormyrops_kingsleyae
ENSVPAG00000010041	PABPC4	73	73.156	ENSPSIG00000016892	PABPC4	79	73.156	Pelodiscus_sinensis
ENSVPAG00000010041	PABPC4	60	70.206	ENSPMGG00000009073	pabpc4	74	70.206	Periophthalmus_magnuspinnatus
ENSVPAG00000010041	PABPC4	77	93.617	ENSPEMG00000023569	-	84	93.617	Peromyscus_maniculatus_bairdii
ENSVPAG00000010041	PABPC4	77	85.714	ENSPEMG00000024193	-	83	85.714	Peromyscus_maniculatus_bairdii
ENSVPAG00000010041	PABPC4	73	64.620	ENSPMAG00000002836	pabpc4	81	64.620	Petromyzon_marinus
ENSVPAG00000010041	PABPC4	53	78.061	ENSPMAG00000007885	pabpc4	62	78.061	Petromyzon_marinus
ENSVPAG00000010041	PABPC4	73	73.451	ENSPCIG00000020674	PABPC4	75	86.667	Phascolarctos_cinereus
ENSVPAG00000010041	PABPC4	72	70.206	ENSPFOG00000002682	pabpc4	78	70.206	Poecilia_formosa
ENSVPAG00000010041	PABPC4	72	70.206	ENSPLAG00000010112	pabpc4	78	70.206	Poecilia_latipinna
ENSVPAG00000010041	PABPC4	72	70.206	ENSPMEG00000019739	pabpc4	78	70.206	Poecilia_mexicana
ENSVPAG00000010041	PABPC4	73	70.206	ENSPREG00000001589	pabpc4	68	80.769	Poecilia_reticulata
ENSVPAG00000010041	PABPC4	77	97.872	ENSPPYG00000001506	PABPC4	84	97.872	Pongo_abelii
ENSVPAG00000010041	PABPC4	77	100.000	ENSPCAG00000003341	PABPC4	84	100.000	Procavia_capensis
ENSVPAG00000010041	PABPC4	53	96.429	ENSPCOG00000025882	-	73	96.429	Propithecus_coquereli
ENSVPAG00000010041	PABPC4	77	97.183	ENSPCOG00000023725	-	84	97.183	Propithecus_coquereli
ENSVPAG00000010041	PABPC4	59	97.872	ENSPVAG00000002187	PABPC4	76	97.872	Pteropus_vampyrus
ENSVPAG00000010041	PABPC4	73	70.796	ENSPNYG00000006134	pabpc4	71	70.796	Pundamilia_nyererei
ENSVPAG00000010041	PABPC4	73	70.588	ENSPNAG00000024355	pabpc4	73	70.588	Pygocentrus_nattereri
ENSVPAG00000010041	PABPC4	68	95.312	ENSRNOG00000028592	AABR07035074.1	83	95.312	Rattus_norvegicus
ENSVPAG00000010041	PABPC4	77	92.857	ENSRNOG00000015642	Pabpc4	83	92.857	Rattus_norvegicus
ENSVPAG00000010041	PABPC4	77	97.872	ENSRBIG00000039761	PABPC4	84	97.872	Rhinopithecus_bieti
ENSVPAG00000010041	PABPC4	77	97.872	ENSRROG00000033355	PABPC4	84	97.872	Rhinopithecus_roxellana
ENSVPAG00000010041	PABPC4	77	98.582	ENSSBOG00000026193	PABPC4	84	98.582	Saimiri_boliviensis_boliviensis
ENSVPAG00000010041	PABPC4	73	73.451	ENSSHAG00000018139	PABPC4	79	73.451	Sarcophilus_harrisii
ENSVPAG00000010041	PABPC4	69	69.745	ENSSFOG00015023514	pabpc4	71	69.745	Scleropages_formosus
ENSVPAG00000010041	PABPC4	73	69.322	ENSSMAG00000009007	pabpc4	71	69.322	Scophthalmus_maximus
ENSVPAG00000010041	PABPC4	73	69.617	ENSSDUG00000012683	pabpc4	71	69.617	Seriola_dumerili
ENSVPAG00000010041	PABPC4	73	69.617	ENSSLDG00000013025	pabpc4	71	69.617	Seriola_lalandi_dorsalis
ENSVPAG00000010041	PABPC4	59	97.163	ENSSARG00000000310	PABPC4	79	97.163	Sorex_araneus
ENSVPAG00000010041	PABPC4	73	72.861	ENSSPUG00000003204	PABPC4	79	72.861	Sphenodon_punctatus
ENSVPAG00000010041	PABPC4	73	69.912	ENSSPAG00000009252	pabpc4	73	77.419	Stegastes_partitus
ENSVPAG00000010041	PABPC4	77	98.582	ENSSSCG00000003660	-	84	98.582	Sus_scrofa
ENSVPAG00000010041	PABPC4	73	71.386	ENSTGUG00000001266	PABPC4	80	71.386	Taeniopygia_guttata
ENSVPAG00000010041	PABPC4	73	70.206	ENSTRUG00000005907	pabpc4	78	70.206	Takifugu_rubripes
ENSVPAG00000010041	PABPC4	51	69.617	ENSTNIG00000016902	pabpc4	62	69.617	Tetraodon_nigroviridis
ENSVPAG00000010041	PABPC4	57	96.429	ENSTBEG00000009035	PABPC4	71	96.429	Tupaia_belangeri
ENSVPAG00000010041	PABPC4	59	97.872	ENSTTRG00000014340	PABPC4	63	97.872	Tursiops_truncatus
ENSVPAG00000010041	PABPC4	77	97.163	ENSUAMG00000000303	PABPC4	84	97.163	Ursus_americanus
ENSVPAG00000010041	PABPC4	77	97.163	ENSUMAG00000019585	PABPC4	84	97.163	Ursus_maritimus
ENSVPAG00000010041	PABPC4	77	97.872	ENSVVUG00000005215	PABPC4	84	97.872	Vulpes_vulpes
ENSVPAG00000010041	PABPC4	51	55.952	ENSXETG00000027221	-	100	55.952	Xenopus_tropicalis
ENSVPAG00000010041	PABPC4	73	70.796	ENSXETG00000010946	pabpc4	72	70.796	Xenopus_tropicalis
ENSVPAG00000010041	PABPC4	54	81.193	ENSXCOG00000013190	pabpc4	96	85.714	Xiphophorus_couchianus
ENSVPAG00000010041	PABPC4	73	69.912	ENSXMAG00000019007	pabpc4	66	82.110	Xiphophorus_maculatus