EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVPAG00000010094 (Gene tree)
Gene ID: -
Gene Symbol: SRSF1
Alias: -
Full Name: serine and arginine rich splicing factor 1
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 5081 bases
Position: chrGeneScaffold_1539:49697-54777
Accession: 10780
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000009390	RRM_1	PF00076.22	8.2e-33	1	2
ENSVPAP00000009390	RRM_1	PF00076.22	8.2e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000010094	SRSF1-201	747	-	ENSVPAP00000009390	248 (aa)	-	UPI00018BCB5E

Gene Model

Click here to download ENSVPAG00000010094's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000010094's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVPAG00000010094	SRSF1	65	46.386	ENSVPAG00000006448	SRSF5	60	44.910

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000010094	SRSF1	100	99.597	ENSG00000136450	SRSF1	100	100.000	Homo_sapiens
ENSVPAG00000010094	SRSF1	79	90.640	ENSAPOG00000008542	-	81	89.163	Acanthochromis_polyacanthus
ENSVPAG00000010094	SRSF1	78	91.192	ENSAPOG00000002748	-	78	88.601	Acanthochromis_polyacanthus
ENSVPAG00000010094	SRSF1	100	96.774	ENSAMEG00000002635	SRSF1	100	96.774	Ailuropoda_melanoleuca
ENSVPAG00000010094	SRSF1	78	91.192	ENSACIG00000008091	srsf1a	83	89.119	Amphilophus_citrinellus
ENSVPAG00000010094	SRSF1	79	90.640	ENSAOCG00000000337	-	82	89.163	Amphiprion_ocellaris
ENSVPAG00000010094	SRSF1	78	91.710	ENSAOCG00000010671	-	83	89.637	Amphiprion_ocellaris
ENSVPAG00000010094	SRSF1	79	90.640	ENSAPEG00000023352	-	81	89.163	Amphiprion_percula
ENSVPAG00000010094	SRSF1	78	91.710	ENSAPEG00000009915	-	83	89.637	Amphiprion_percula
ENSVPAG00000010094	SRSF1	82	86.700	ENSATEG00000021567	-	81	87.817	Anabas_testudineus
ENSVPAG00000010094	SRSF1	78	91.710	ENSATEG00000022403	-	77	89.637	Anabas_testudineus
ENSVPAG00000010094	SRSF1	100	97.984	ENSACAG00000005542	-	100	97.984	Anolis_carolinensis
ENSVPAG00000010094	SRSF1	81	73.000	ENSANAG00000025417	-	75	71.066	Aotus_nancymaae
ENSVPAG00000010094	SRSF1	99	99.593	ENSANAG00000020583	-	99	98.611	Aotus_nancymaae
ENSVPAG00000010094	SRSF1	54	77.419	ENSAMXG00000024373	-	72	75.641	Astyanax_mexicanus
ENSVPAG00000010094	SRSF1	94	91.213	ENSAMXG00000035996	srsf1a	79	92.462	Astyanax_mexicanus
ENSVPAG00000010094	SRSF1	100	99.597	ENSBTAG00000014766	SRSF1	100	99.597	Bos_taurus
ENSVPAG00000010094	SRSF1	99	99.593	ENSCJAG00000041713	-	99	98.611	Callithrix_jacchus
ENSVPAG00000010094	SRSF1	79	91.327	ENSCJAG00000008111	-	88	90.863	Callithrix_jacchus
ENSVPAG00000010094	SRSF1	99	99.593	ENSCAFG00000017430	SRSF1	97	99.593	Canis_familiaris
ENSVPAG00000010094	SRSF1	99	99.593	ENSCAFG00020025632	-	97	99.593	Canis_lupus_dingo
ENSVPAG00000010094	SRSF1	100	99.597	ENSCHIG00000010787	SRSF1	100	99.597	Capra_hircus
ENSVPAG00000010094	SRSF1	99	99.593	ENSTSYG00000013899	-	99	98.611	Carlito_syrichta
ENSVPAG00000010094	SRSF1	100	99.597	ENSCPOG00000032681	-	100	99.597	Cavia_porcellus
ENSVPAG00000010094	SRSF1	100	99.597	ENSCCAG00000029484	-	100	99.597	Cebus_capucinus
ENSVPAG00000010094	SRSF1	99	99.593	ENSCATG00000042294	-	99	98.611	Cercocebus_atys
ENSVPAG00000010094	SRSF1	100	99.597	ENSCLAG00000014707	-	100	99.597	Chinchilla_lanigera
ENSVPAG00000010094	SRSF1	99	98.780	ENSCSAG00000005642	-	97	98.780	Chlorocebus_sabaeus
ENSVPAG00000010094	SRSF1	100	99.597	ENSCHOG00000001899	SRSF1	100	99.597	Choloepus_hoffmanni
ENSVPAG00000010094	SRSF1	100	98.387	ENSCPBG00000009851	-	100	98.387	Chrysemys_picta_bellii
ENSVPAG00000010094	SRSF1	99	99.593	ENSCANG00000029726	-	99	98.611	Colobus_angolensis_palliatus
ENSVPAG00000010094	SRSF1	99	99.593	ENSCGRG00001000670	Srsf1	97	99.593	Cricetulus_griseus_chok1gshd
ENSVPAG00000010094	SRSF1	100	99.597	ENSCGRG00000005590	Srsf1	100	99.597	Cricetulus_griseus_crigri
ENSVPAG00000010094	SRSF1	79	83.491	ENSCSEG00000009973	-	81	82.547	Cynoglossus_semilaevis
ENSVPAG00000010094	SRSF1	78	90.816	ENSCSEG00000014272	-	81	86.010	Cynoglossus_semilaevis
ENSVPAG00000010094	SRSF1	78	89.231	ENSCVAG00000005458	-	91	89.071	Cyprinodon_variegatus
ENSVPAG00000010094	SRSF1	78	91.710	ENSCVAG00000018617	-	78	89.637	Cyprinodon_variegatus
ENSVPAG00000010094	SRSF1	99	96.327	ENSDARG00000017843	srsf1b	99	96.327	Danio_rerio
ENSVPAG00000010094	SRSF1	78	89.216	ENSDARG00000057691	srsf1a	99	87.435	Danio_rerio
ENSVPAG00000010094	SRSF1	99	99.593	ENSDNOG00000011737	-	97	99.593	Dasypus_novemcinctus
ENSVPAG00000010094	SRSF1	100	99.597	ENSDORG00000015082	Srsf1	100	99.597	Dipodomys_ordii
ENSVPAG00000010094	SRSF1	74	98.370	ENSETEG00000005349	-	63	98.370	Echinops_telfairi
ENSVPAG00000010094	SRSF1	99	99.593	ENSEASG00005002922	-	97	99.593	Equus_asinus_asinus
ENSVPAG00000010094	SRSF1	100	99.597	ENSECAG00000016654	SRSF1	100	99.597	Equus_caballus
ENSVPAG00000010094	SRSF1	74	99.457	ENSEEUG00000009255	-	63	99.457	Erinaceus_europaeus
ENSVPAG00000010094	SRSF1	78	92.784	ENSELUG00000021646	srsf1a	77	89.175	Esox_lucius
ENSVPAG00000010094	SRSF1	99	99.593	ENSFCAG00000002250	-	97	99.593	Felis_catus
ENSVPAG00000010094	SRSF1	99	81.301	ENSFALG00000005062	-	97	81.301	Ficedula_albicollis
ENSVPAG00000010094	SRSF1	100	99.597	ENSFDAG00000010646	-	100	99.597	Fukomys_damarensis
ENSVPAG00000010094	SRSF1	78	91.710	ENSFHEG00000003174	srsf1a	83	89.637	Fundulus_heteroclitus
ENSVPAG00000010094	SRSF1	80	88.889	ENSGMOG00000014787	-	80	86.010	Gadus_morhua
ENSVPAG00000010094	SRSF1	100	98.387	ENSGALG00000005525	SRSF1	100	98.387	Gallus_gallus
ENSVPAG00000010094	SRSF1	79	86.294	ENSGACG00000020621	srsf1b	80	84.264	Gasterosteus_aculeatus
ENSVPAG00000010094	SRSF1	99	98.374	ENSGAGG00000022965	-	97	98.374	Gopherus_agassizii
ENSVPAG00000010094	SRSF1	99	99.593	ENSGGOG00000004386	SRSF1	99	98.611	Gorilla_gorilla
ENSVPAG00000010094	SRSF1	78	91.192	ENSHBUG00000016788	srsf1a	80	89.119	Haplochromis_burtoni
ENSVPAG00000010094	SRSF1	87	99.535	ENSHGLG00000000669	-	100	99.535	Heterocephalus_glaber_female
ENSVPAG00000010094	SRSF1	87	99.535	ENSHGLG00000000600	-	100	99.535	Heterocephalus_glaber_female
ENSVPAG00000010094	SRSF1	100	99.597	ENSHGLG00100016906	-	100	99.597	Heterocephalus_glaber_male
ENSVPAG00000010094	SRSF1	78	86.802	ENSHCOG00000018918	srsf1a	77	88.325	Hippocampus_comes
ENSVPAG00000010094	SRSF1	94	90.795	ENSIPUG00000017039	srsf1a	79	92.965	Ictalurus_punctatus
ENSVPAG00000010094	SRSF1	100	95.565	ENSIPUG00000008750	srsf1b	100	95.565	Ictalurus_punctatus
ENSVPAG00000010094	SRSF1	100	99.597	ENSSTOG00000000243	-	100	99.597	Ictidomys_tridecemlineatus
ENSVPAG00000010094	SRSF1	100	99.597	ENSJJAG00000000102	-	100	99.597	Jaculus_jaculus
ENSVPAG00000010094	SRSF1	51	92.126	ENSJJAG00000014464	-	95	88.189	Jaculus_jaculus
ENSVPAG00000010094	SRSF1	78	91.710	ENSKMAG00000019232	srsf1a	78	88.083	Kryptolebias_marmoratus
ENSVPAG00000010094	SRSF1	78	90.674	ENSLBEG00000020864	-	83	88.601	Labrus_bergylta
ENSVPAG00000010094	SRSF1	79	84.000	ENSLBEG00000015294	-	80	85.000	Labrus_bergylta
ENSVPAG00000010094	SRSF1	78	94.330	ENSLACG00000014160	srsf1a	73	92.784	Latimeria_chalumnae
ENSVPAG00000010094	SRSF1	100	96.774	ENSLOCG00000005994	srsf1a	100	96.774	Lepisosteus_oculatus
ENSVPAG00000010094	SRSF1	100	99.597	ENSLAFG00000025743	SRSF1	100	99.597	Loxodonta_africana
ENSVPAG00000010094	SRSF1	100	99.597	ENSMFAG00000040003	-	100	99.597	Macaca_fascicularis
ENSVPAG00000010094	SRSF1	100	95.968	ENSMMUG00000003260	-	98	95.968	Macaca_mulatta
ENSVPAG00000010094	SRSF1	99	99.593	ENSMMUG00000004725	SRSF1	99	98.611	Macaca_mulatta
ENSVPAG00000010094	SRSF1	99	99.593	ENSMNEG00000027680	-	99	98.611	Macaca_nemestrina
ENSVPAG00000010094	SRSF1	100	95.565	ENSMNEG00000015983	-	98	95.565	Macaca_nemestrina
ENSVPAG00000010094	SRSF1	100	99.597	ENSMLEG00000040509	SRSF1	100	99.597	Mandrillus_leucophaeus
ENSVPAG00000010094	SRSF1	100	92.339	ENSMLEG00000015243	-	77	91.878	Mandrillus_leucophaeus
ENSVPAG00000010094	SRSF1	79	89.340	ENSMAMG00000019687	-	80	87.310	Mastacembelus_armatus
ENSVPAG00000010094	SRSF1	78	91.710	ENSMAMG00000018454	-	78	89.637	Mastacembelus_armatus
ENSVPAG00000010094	SRSF1	79	94.416	ENSMAMG00000019691	-	81	91.371	Mastacembelus_armatus
ENSVPAG00000010094	SRSF1	100	99.597	ENSMAUG00000021845	Srsf1	100	99.597	Mesocricetus_auratus
ENSVPAG00000010094	SRSF1	99	99.593	ENSMICG00000013639	-	99	98.611	Microcebus_murinus
ENSVPAG00000010094	SRSF1	100	99.597	ENSMOCG00000001996	Srsf1	100	99.597	Microtus_ochrogaster
ENSVPAG00000010094	SRSF1	78	90.155	ENSMMOG00000014354	srsf1a	83	88.083	Mola_mola
ENSVPAG00000010094	SRSF1	74	98.378	ENSMODG00000014781	-	63	98.378	Monodelphis_domestica
ENSVPAG00000010094	SRSF1	78	91.192	ENSMALG00000017129	-	75	88.083	Monopterus_albus
ENSVPAG00000010094	SRSF1	82	77.451	ENSMALG00000007763	-	79	79.188	Monopterus_albus
ENSVPAG00000010094	SRSF1	100	99.597	MGP_CAROLIEiJ_G0016943	Srsf1	100	99.597	Mus_caroli
ENSVPAG00000010094	SRSF1	100	99.597	ENSMUSG00000018379	Srsf1	100	99.597	Mus_musculus
ENSVPAG00000010094	SRSF1	100	99.597	MGP_PahariEiJ_G0018074	Srsf1	100	99.597	Mus_pahari
ENSVPAG00000010094	SRSF1	100	99.597	MGP_SPRETEiJ_G0017790	Srsf1	100	99.597	Mus_spretus
ENSVPAG00000010094	SRSF1	100	99.597	ENSMPUG00000015369	SRSF1	100	99.597	Mustela_putorius_furo
ENSVPAG00000010094	SRSF1	100	99.597	ENSMLUG00000011040	SRSF1	100	99.597	Myotis_lucifugus
ENSVPAG00000010094	SRSF1	82	89.163	ENSMLUG00000023995	-	79	88.832	Myotis_lucifugus
ENSVPAG00000010094	SRSF1	100	99.597	ENSNGAG00000011395	Srsf1	100	99.597	Nannospalax_galili
ENSVPAG00000010094	SRSF1	100	79.435	ENSNBRG00000008041	srsf1b	80	82.234	Neolamprologus_brichardi
ENSVPAG00000010094	SRSF1	99	99.593	ENSNLEG00000008088	-	99	98.611	Nomascus_leucogenys
ENSVPAG00000010094	SRSF1	51	98.425	ENSMEUG00000002783	-	100	98.425	Notamacropus_eugenii
ENSVPAG00000010094	SRSF1	74	99.454	ENSOPRG00000001234	-	100	99.454	Ochotona_princeps
ENSVPAG00000010094	SRSF1	100	99.194	ENSODEG00000011481	-	100	99.194	Octodon_degus
ENSVPAG00000010094	SRSF1	78	91.192	ENSONIG00000013160	-	77	89.119	Oreochromis_niloticus
ENSVPAG00000010094	SRSF1	96	90.295	ENSONIG00000004860	-	81	90.355	Oreochromis_niloticus
ENSVPAG00000010094	SRSF1	100	69.841	ENSOCUG00000010894	-	77	71.282	Oryctolagus_cuniculus
ENSVPAG00000010094	SRSF1	78	91.710	ENSORLG00000004580	srsf1a	78	89.637	Oryzias_latipes
ENSVPAG00000010094	SRSF1	78	91.710	ENSORLG00020009456	srsf1a	83	89.637	Oryzias_latipes_hni
ENSVPAG00000010094	SRSF1	78	91.710	ENSORLG00015014384	srsf1a	83	89.637	Oryzias_latipes_hsok
ENSVPAG00000010094	SRSF1	71	89.773	ENSOMEG00000004106	srsf1a	71	87.500	Oryzias_melastigma
ENSVPAG00000010094	SRSF1	100	99.597	ENSOGAG00000025950	-	100	99.597	Otolemur_garnettii
ENSVPAG00000010094	SRSF1	100	94.758	ENSOARG00000008323	SRSF1	100	94.758	Ovis_aries
ENSVPAG00000010094	SRSF1	100	99.597	ENSPPAG00000043403	-	100	99.597	Pan_paniscus
ENSVPAG00000010094	SRSF1	100	99.597	ENSPPRG00000004238	-	100	99.597	Panthera_pardus
ENSVPAG00000010094	SRSF1	99	99.593	ENSPTRG00000049077	SRSF1	99	98.611	Pan_troglodytes
ENSVPAG00000010094	SRSF1	99	99.593	ENSPANG00000022305	-	99	98.611	Papio_anubis
ENSVPAG00000010094	SRSF1	100	75.403	ENSPANG00000030275	-	76	96.124	Papio_anubis
ENSVPAG00000010094	SRSF1	78	92.784	ENSPKIG00000007204	srsf1a	83	91.710	Paramormyrops_kingsleyae
ENSVPAG00000010094	SRSF1	100	95.565	ENSPKIG00000012857	srsf1b	100	95.565	Paramormyrops_kingsleyae
ENSVPAG00000010094	SRSF1	79	90.452	ENSPSIG00000009000	-	78	97.222	Pelodiscus_sinensis
ENSVPAG00000010094	SRSF1	96	84.519	ENSPMGG00000005467	-	78	83.938	Periophthalmus_magnuspinnatus
ENSVPAG00000010094	SRSF1	78	88.889	ENSPMGG00000013112	-	79	90.909	Periophthalmus_magnuspinnatus
ENSVPAG00000010094	SRSF1	100	99.597	ENSPEMG00000021416	Srsf1	100	99.597	Peromyscus_maniculatus_bairdii
ENSVPAG00000010094	SRSF1	100	98.795	ENSPCIG00000006076	-	100	98.795	Phascolarctos_cinereus
ENSVPAG00000010094	SRSF1	79	89.394	ENSPFOG00000018325	-	70	89.175	Poecilia_formosa
ENSVPAG00000010094	SRSF1	79	89.394	ENSPLAG00000008416	srsf1b	79	89.175	Poecilia_latipinna
ENSVPAG00000010094	SRSF1	50	89.431	ENSPMEG00000020607	-	98	87.805	Poecilia_mexicana
ENSVPAG00000010094	SRSF1	79	89.394	ENSPMEG00000002388	-	79	89.175	Poecilia_mexicana
ENSVPAG00000010094	SRSF1	50	89.431	ENSPMEG00000014312	-	98	87.805	Poecilia_mexicana
ENSVPAG00000010094	SRSF1	78	91.710	ENSPREG00000009667	srsf1a	78	89.637	Poecilia_reticulata
ENSVPAG00000010094	SRSF1	100	99.597	ENSPPYG00000008240	SRSF1	100	99.597	Pongo_abelii
ENSVPAG00000010094	SRSF1	100	99.597	ENSPCAG00000005199	SRSF1	100	99.597	Procavia_capensis
ENSVPAG00000010094	SRSF1	80	76.238	ENSPCOG00000025736	-	95	76.020	Propithecus_coquereli
ENSVPAG00000010094	SRSF1	100	99.597	ENSPCOG00000023654	-	100	99.597	Propithecus_coquereli
ENSVPAG00000010094	SRSF1	75	100.000	ENSPVAG00000000519	-	75	100.000	Pteropus_vampyrus
ENSVPAG00000010094	SRSF1	94	92.735	ENSPNAG00000022241	srsf1a	78	89.691	Pygocentrus_nattereri
ENSVPAG00000010094	SRSF1	79	92.386	ENSPNAG00000014601	srsf1b	80	89.340	Pygocentrus_nattereri
ENSVPAG00000010094	SRSF1	100	99.597	ENSRNOG00000050323	Srsf1	100	99.597	Rattus_norvegicus
ENSVPAG00000010094	SRSF1	99	99.593	ENSRBIG00000034445	-	99	98.611	Rhinopithecus_bieti
ENSVPAG00000010094	SRSF1	100	99.597	ENSRROG00000041506	-	100	99.597	Rhinopithecus_roxellana
ENSVPAG00000010094	SRSF1	100	99.597	ENSSBOG00000025377	-	100	99.597	Saimiri_boliviensis_boliviensis
ENSVPAG00000010094	SRSF1	100	98.795	ENSSHAG00000002552	-	100	98.795	Sarcophilus_harrisii
ENSVPAG00000010094	SRSF1	99	95.951	ENSSFOG00015004800	srsf1a	99	95.951	Scleropages_formosus
ENSVPAG00000010094	SRSF1	78	90.155	ENSSMAG00000007018	-	78	87.565	Scophthalmus_maximus
ENSVPAG00000010094	SRSF1	94	86.667	ENSSMAG00000009719	-	80	85.784	Scophthalmus_maximus
ENSVPAG00000010094	SRSF1	100	76.494	ENSSDUG00000003929	-	84	84.500	Seriola_dumerili
ENSVPAG00000010094	SRSF1	78	90.674	ENSSDUG00000011303	-	83	88.601	Seriola_dumerili
ENSVPAG00000010094	SRSF1	78	90.674	ENSSLDG00000010543	-	78	88.601	Seriola_lalandi_dorsalis
ENSVPAG00000010094	SRSF1	95	76.271	ENSSLDG00000016895	-	78	82.888	Seriola_lalandi_dorsalis
ENSVPAG00000010094	SRSF1	79	83.333	ENSSLDG00000016868	-	78	83.333	Seriola_lalandi_dorsalis
ENSVPAG00000010094	SRSF1	74	99.457	ENSSARG00000010949	-	63	99.457	Sorex_araneus
ENSVPAG00000010094	SRSF1	99	98.374	ENSSPUG00000000804	-	97	98.374	Sphenodon_punctatus
ENSVPAG00000010094	SRSF1	78	92.228	ENSSPAG00000022562	-	78	90.155	Stegastes_partitus
ENSVPAG00000010094	SRSF1	79	87.560	ENSSPAG00000014152	-	81	86.603	Stegastes_partitus
ENSVPAG00000010094	SRSF1	100	99.597	ENSSSCG00000017626	-	100	99.597	Sus_scrofa
ENSVPAG00000010094	SRSF1	74	97.826	ENSTGUG00000008416	-	100	97.826	Taeniopygia_guttata
ENSVPAG00000010094	SRSF1	78	90.674	ENSTRUG00000003691	srsf1a	78	88.601	Takifugu_rubripes
ENSVPAG00000010094	SRSF1	78	90.674	ENSTNIG00000016223	srsf1a	77	88.601	Tetraodon_nigroviridis
ENSVPAG00000010094	SRSF1	74	97.826	ENSTBEG00000015378	-	63	97.826	Tupaia_belangeri
ENSVPAG00000010094	SRSF1	74	99.454	ENSTTRG00000007310	SRSF1	100	99.454	Tursiops_truncatus
ENSVPAG00000010094	SRSF1	100	99.597	ENSUAMG00000009858	SRSF1	100	99.597	Ursus_americanus
ENSVPAG00000010094	SRSF1	99	99.593	ENSUMAG00000000455	-	97	99.593	Ursus_maritimus
ENSVPAG00000010094	SRSF1	99	99.593	ENSVVUG00000011882	-	97	99.593	Vulpes_vulpes
ENSVPAG00000010094	SRSF1	100	95.565	ENSXETG00000008954	srsf1	100	91.011	Xenopus_tropicalis
ENSVPAG00000010094	SRSF1	78	91.710	ENSXMAG00000011766	srsf1a	78	89.637	Xiphophorus_maculatus