EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVPAG00000010492 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 77261 bases
Position: chrGeneScaffold_599:113636-190896
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000009764	ResIII	PF04851.15	4.5e-12	1	1
ENSVPAP00000009764	DEAD	PF00270.29	8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000010493	-	2901	-	ENSVPAP00000009764	966 (aa)	-	UPI00018BD66D

Gene Model

Click here to download ENSVPAG00000010492's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000010492's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVPAG00000010492	-	77	88.927	ENSVPAG00000008982	SMARCA5	72	87.869

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000010492	-	86	99.683	ENSG00000102038	SMARCA1	79	99.683	Homo_sapiens
ENSVPAG00000010492	-	77	87.197	ENSAPOG00000016035	smarca5	76	86.842	Acanthochromis_polyacanthus
ENSVPAG00000010492	-	85	99.351	ENSAMEG00000015218	SMARCA1	77	99.351	Ailuropoda_melanoleuca
ENSVPAG00000010492	-	70	87.543	ENSACIG00000016982	smarca5	76	87.021	Amphilophus_citrinellus
ENSVPAG00000010492	-	77	87.197	ENSAOCG00000015578	smarca5	73	86.842	Amphiprion_ocellaris
ENSVPAG00000010492	-	77	87.197	ENSAPEG00000011117	smarca5	75	87.629	Amphiprion_percula
ENSVPAG00000010492	-	77	87.543	ENSATEG00000012894	smarca5	75	85.266	Anabas_testudineus
ENSVPAG00000010492	-	77	94.158	ENSAPLG00000013149	SMARCA1	78	93.137	Anas_platyrhynchos
ENSVPAG00000010492	-	79	92.754	ENSACAG00000011376	SMARCA1	73	92.754	Anolis_carolinensis
ENSVPAG00000010492	-	85	92.532	ENSANAG00000023098	SMARCA1	77	92.532	Aotus_nancymaae
ENSVPAG00000010492	-	77	87.543	ENSACLG00000025356	smarca5	73	87.171	Astatotilapia_calliptera
ENSVPAG00000010492	-	76	90.064	ENSAMXG00000011227	smarca1	80	90.064	Astyanax_mexicanus
ENSVPAG00000010492	-	77	87.197	ENSAMXG00000005709	smarca5	73	86.513	Astyanax_mexicanus
ENSVPAG00000010492	-	86	99.676	ENSBTAG00000002292	SMARCA1	79	99.676	Bos_taurus
ENSVPAG00000010492	-	78	63.855	WBGene00002169	isw-1	75	63.855	Caenorhabditis_elegans
ENSVPAG00000010492	-	85	99.351	ENSCJAG00000002868	SMARCA1	77	99.351	Callithrix_jacchus
ENSVPAG00000010492	-	78	99.675	ENSCAFG00000018673	SMARCA1	73	99.675	Canis_familiaris
ENSVPAG00000010492	-	79	99.675	ENSCAFG00020001751	SMARCA1	75	99.675	Canis_lupus_dingo
ENSVPAG00000010492	-	86	99.683	ENSCHIG00000009837	SMARCA1	79	99.683	Capra_hircus
ENSVPAG00000010492	-	85	99.026	ENSTSYG00000004240	SMARCA1	78	99.026	Carlito_syrichta
ENSVPAG00000010492	-	86	98.730	ENSCPOG00000013601	SMARCA1	80	98.730	Cavia_porcellus
ENSVPAG00000010492	-	85	99.351	ENSCCAG00000030817	SMARCA1	77	99.351	Cebus_capucinus
ENSVPAG00000010492	-	85	99.675	ENSCATG00000015921	SMARCA1	77	99.675	Cercocebus_atys
ENSVPAG00000010492	-	86	98.413	ENSCLAG00000002171	SMARCA1	79	98.413	Chinchilla_lanigera
ENSVPAG00000010492	-	79	99.675	ENSCSAG00000008460	SMARCA1	72	99.675	Chlorocebus_sabaeus
ENSVPAG00000010492	-	80	93.478	ENSCPBG00000001146	SMARCA1	79	93.478	Chrysemys_picta_bellii
ENSVPAG00000010492	-	73	78.983	ENSCING00000004110	swi/snf	70	78.983	Ciona_intestinalis
ENSVPAG00000010492	-	74	77.152	ENSCSAVG00000004620	-	74	77.311	Ciona_savignyi
ENSVPAG00000010492	-	85	99.675	ENSCANG00000007183	SMARCA1	77	99.675	Colobus_angolensis_palliatus
ENSVPAG00000010492	-	80	97.771	ENSCGRG00001010776	Smarca1	73	97.771	Cricetulus_griseus_chok1gshd
ENSVPAG00000010492	-	80	97.771	ENSCGRG00000015301	Smarca1	77	97.771	Cricetulus_griseus_crigri
ENSVPAG00000010492	-	79	85.993	ENSCSEG00000000328	smarca5	74	86.513	Cynoglossus_semilaevis
ENSVPAG00000010492	-	77	87.197	ENSCVAG00000008668	smarca5	75	87.329	Cyprinodon_variegatus
ENSVPAG00000010492	-	79	91.475	ENSDARG00000012776	smarca1	73	91.475	Danio_rerio
ENSVPAG00000010492	-	77	87.889	ENSDARG00000052348	smarca5	73	87.171	Danio_rerio
ENSVPAG00000010492	-	79	97.585	ENSDNOG00000004315	SMARCA1	74	97.585	Dasypus_novemcinctus
ENSVPAG00000010492	-	80	98.089	ENSDORG00000009270	Smarca1	74	98.089	Dipodomys_ordii
ENSVPAG00000010492	-	77	80.000	FBgn0011604	Iswi	74	77.994	Drosophila_melanogaster
ENSVPAG00000010492	-	66	98.214	ENSETEG00000017426	SMARCA1	66	98.214	Echinops_telfairi
ENSVPAG00000010492	-	77	84.155	ENSEBUG00000001239	smarca5	76	81.884	Eptatretus_burgeri
ENSVPAG00000010492	-	80	97.343	ENSEASG00005008218	SMARCA1	83	97.343	Equus_asinus_asinus
ENSVPAG00000010492	-	80	99.675	ENSECAG00000012106	SMARCA1	73	99.675	Equus_caballus
ENSVPAG00000010492	-	68	98.013	ENSEEUG00000014927	SMARCA1	68	98.013	Erinaceus_europaeus
ENSVPAG00000010492	-	77	91.409	ENSELUG00000010515	smarca1	75	89.968	Esox_lucius
ENSVPAG00000010492	-	85	100.000	ENSFCAG00000018496	SMARCA1	77	100.000	Felis_catus
ENSVPAG00000010492	-	75	92.754	ENSFALG00000000209	SMARCA1	78	92.989	Ficedula_albicollis
ENSVPAG00000010492	-	86	99.365	ENSFDAG00000009818	SMARCA1	82	99.365	Fukomys_damarensis
ENSVPAG00000010492	-	77	87.197	ENSFHEG00000007687	smarca5	73	86.513	Fundulus_heteroclitus
ENSVPAG00000010492	-	77	93.814	ENSGALG00000008431	SMARCA1	76	93.237	Gallus_gallus
ENSVPAG00000010492	-	77	87.543	ENSGAFG00000017731	smarca5	73	86.842	Gambusia_affinis
ENSVPAG00000010492	-	79	93.478	ENSGAGG00000023575	SMARCA1	78	93.478	Gopherus_agassizii
ENSVPAG00000010492	-	58	99.034	ENSGGOG00000012841	-	78	99.034	Gorilla_gorilla
ENSVPAG00000010492	-	86	98.413	ENSHGLG00000003080	SMARCA1	79	98.413	Heterocephalus_glaber_female
ENSVPAG00000010492	-	86	98.413	ENSHGLG00100001102	SMARCA1	86	96.057	Heterocephalus_glaber_male
ENSVPAG00000010492	-	77	86.851	ENSHCOG00000005458	smarca5	73	86.513	Hippocampus_comes
ENSVPAG00000010492	-	77	87.197	ENSIPUG00000005229	SMARCA5	75	86.184	Ictalurus_punctatus
ENSVPAG00000010492	-	79	90.164	ENSIPUG00000016905	Smarca1	77	90.164	Ictalurus_punctatus
ENSVPAG00000010492	-	80	99.365	ENSSTOG00000014524	SMARCA1	74	99.365	Ictidomys_tridecemlineatus
ENSVPAG00000010492	-	80	97.343	ENSJJAG00000002593	Smarca1	74	97.343	Jaculus_jaculus
ENSVPAG00000010492	-	77	87.889	ENSKMAG00000003777	smarca5	73	87.500	Kryptolebias_marmoratus
ENSVPAG00000010492	-	75	87.732	ENSLBEG00000013295	SMARCA1	76	87.368	Labrus_bergylta
ENSVPAG00000010492	-	77	87.197	ENSLBEG00000018112	smarca5	74	86.842	Labrus_bergylta
ENSVPAG00000010492	-	79	91.304	ENSLACG00000016697	SMARCA1	75	91.304	Latimeria_chalumnae
ENSVPAG00000010492	-	77	91.409	ENSLOCG00000014591	smarca1	74	90.850	Lepisosteus_oculatus
ENSVPAG00000010492	-	80	97.585	ENSLAFG00000000896	SMARCA1	78	97.585	Loxodonta_africana
ENSVPAG00000010492	-	85	99.675	ENSMFAG00000002117	SMARCA1	77	99.683	Macaca_fascicularis
ENSVPAG00000010492	-	85	99.675	ENSMMUG00000008818	SMARCA1	80	98.789	Macaca_mulatta
ENSVPAG00000010492	-	85	99.675	ENSMNEG00000041768	SMARCA1	77	99.683	Macaca_nemestrina
ENSVPAG00000010492	-	85	99.351	ENSMLEG00000043198	SMARCA1	77	99.351	Mandrillus_leucophaeus
ENSVPAG00000010492	-	77	87.543	ENSMAMG00000014294	smarca5	73	87.171	Mastacembelus_armatus
ENSVPAG00000010492	-	77	87.543	ENSMZEG00005009369	smarca5	73	87.171	Maylandia_zebra
ENSVPAG00000010492	-	84	93.814	ENSMGAG00000007042	SMARCA1	81	92.810	Meleagris_gallopavo
ENSVPAG00000010492	-	80	98.413	ENSMAUG00000008133	Smarca1	74	98.413	Mesocricetus_auratus
ENSVPAG00000010492	-	85	99.351	ENSMICG00000015768	SMARCA1	77	99.351	Microcebus_murinus
ENSVPAG00000010492	-	80	98.413	ENSMOCG00000009464	Smarca1	73	98.413	Microtus_ochrogaster
ENSVPAG00000010492	-	77	84.783	ENSMMOG00000005547	smarca5	76	84.783	Mola_mola
ENSVPAG00000010492	-	79	91.935	ENSMODG00000013187	-	74	91.935	Monodelphis_domestica
ENSVPAG00000010492	-	79	85.761	ENSMALG00000002081	smarca5	77	85.761	Monopterus_albus
ENSVPAG00000010492	-	80	98.413	MGP_CAROLIEiJ_G0033034	Smarca1	74	98.413	Mus_caroli
ENSVPAG00000010492	-	80	98.413	ENSMUSG00000031099	Smarca1	74	98.413	Mus_musculus
ENSVPAG00000010492	-	80	98.095	MGP_PahariEiJ_G0031579	Smarca1	74	98.095	Mus_pahari
ENSVPAG00000010492	-	80	98.413	MGP_SPRETEiJ_G0034192	Smarca1	74	98.413	Mus_spretus
ENSVPAG00000010492	-	85	99.351	ENSMPUG00000017423	SMARCA1	73	99.351	Mustela_putorius_furo
ENSVPAG00000010492	-	79	98.309	ENSMLUG00000029614	SMARCA1	71	98.309	Myotis_lucifugus
ENSVPAG00000010492	-	86	99.365	ENSNGAG00000006492	Smarca1	79	99.365	Nannospalax_galili
ENSVPAG00000010492	-	77	87.543	ENSNBRG00000004463	smarca5	76	87.171	Neolamprologus_brichardi
ENSVPAG00000010492	-	85	99.675	ENSNLEG00000015179	SMARCA1	77	99.683	Nomascus_leucogenys
ENSVPAG00000010492	-	82	81.660	ENSMEUG00000008819	SMARCA1	83	81.660	Notamacropus_eugenii
ENSVPAG00000010492	-	86	98.089	ENSODEG00000012163	SMARCA1	79	98.089	Octodon_degus
ENSVPAG00000010492	-	77	87.543	ENSONIG00000009993	smarca5	73	87.171	Oreochromis_niloticus
ENSVPAG00000010492	-	79	93.831	ENSOANG00000002862	SMARCA1	79	93.831	Ornithorhynchus_anatinus
ENSVPAG00000010492	-	80	98.377	ENSOCUG00000001047	SMARCA1	73	98.377	Oryctolagus_cuniculus
ENSVPAG00000010492	-	77	87.543	ENSORLG00000021998	smarca5	73	87.171	Oryzias_latipes
ENSVPAG00000010492	-	77	87.543	ENSORLG00020017679	smarca5	73	87.171	Oryzias_latipes_hni
ENSVPAG00000010492	-	77	87.543	ENSORLG00015017210	smarca5	73	87.171	Oryzias_latipes_hsok
ENSVPAG00000010492	-	77	87.543	ENSOMEG00000000086	smarca5	73	87.171	Oryzias_melastigma
ENSVPAG00000010492	-	86	99.048	ENSOGAG00000004399	SMARCA1	79	99.048	Otolemur_garnettii
ENSVPAG00000010492	-	80	99.675	ENSOARG00000014638	SMARCA1	79	99.675	Ovis_aries
ENSVPAG00000010492	-	85	99.675	ENSPPAG00000034647	SMARCA1	77	99.675	Pan_paniscus
ENSVPAG00000010492	-	85	99.675	ENSPPRG00000008929	SMARCA1	77	99.675	Panthera_pardus
ENSVPAG00000010492	-	80	99.675	ENSPTIG00000000915	SMARCA1	75	99.675	Panthera_tigris_altaica
ENSVPAG00000010492	-	85	99.675	ENSPTRG00000049876	SMARCA1	77	99.675	Pan_troglodytes
ENSVPAG00000010492	-	85	99.675	ENSPANG00000003871	SMARCA1	77	99.675	Papio_anubis
ENSVPAG00000010492	-	79	90.032	ENSPKIG00000013411	smarca1	77	90.032	Paramormyrops_kingsleyae
ENSVPAG00000010492	-	85	93.160	ENSPSIG00000010101	SMARCA1	81	93.160	Pelodiscus_sinensis
ENSVPAG00000010492	-	80	98.730	ENSPEMG00000017503	Smarca1	74	98.730	Peromyscus_maniculatus_bairdii
ENSVPAG00000010492	-	79	92.605	ENSPCIG00000015460	SMARCA1	76	92.605	Phascolarctos_cinereus
ENSVPAG00000010492	-	77	87.543	ENSPFOG00000007649	smarca5	73	86.842	Poecilia_formosa
ENSVPAG00000010492	-	77	87.543	ENSPLAG00000003363	smarca5	73	86.842	Poecilia_latipinna
ENSVPAG00000010492	-	77	87.543	ENSPMEG00000019849	smarca5	73	86.842	Poecilia_mexicana
ENSVPAG00000010492	-	77	87.543	ENSPREG00000023250	smarca5	73	86.842	Poecilia_reticulata
ENSVPAG00000010492	-	79	99.675	ENSPPYG00000020703	SMARCA1	72	99.675	Pongo_abelii
ENSVPAG00000010492	-	65	91.346	ENSPCOG00000020722	SMARCA1	81	98.208	Propithecus_coquereli
ENSVPAG00000010492	-	86	97.143	ENSPVAG00000003805	SMARCA1	79	97.143	Pteropus_vampyrus
ENSVPAG00000010492	-	79	97.585	ENSRNOG00000003762	Smarca1	72	97.585	Rattus_norvegicus
ENSVPAG00000010492	-	85	99.675	ENSRROG00000034167	SMARCA1	77	99.675	Rhinopithecus_roxellana
ENSVPAG00000010492	-	85	99.675	ENSSBOG00000020641	SMARCA1	80	99.675	Saimiri_boliviensis_boliviensis
ENSVPAG00000010492	-	79	85.209	ENSSHAG00000013518	SMARCA1	78	85.209	Sarcophilus_harrisii
ENSVPAG00000010492	-	77	87.889	ENSSFOG00015016794	smarca5	78	87.171	Scleropages_formosus
ENSVPAG00000010492	-	77	92.096	ENSSFOG00015009043	smarca1	75	90.939	Scleropages_formosus
ENSVPAG00000010492	-	77	87.762	ENSSMAG00000004801	smarca5	73	87.375	Scophthalmus_maximus
ENSVPAG00000010492	-	77	86.851	ENSSDUG00000020690	smarca5	74	86.513	Seriola_dumerili
ENSVPAG00000010492	-	77	86.851	ENSSLDG00000025190	smarca5	74	86.513	Seriola_lalandi_dorsalis
ENSVPAG00000010492	-	66	97.163	ENSSARG00000000842	SMARCA1	64	97.163	Sorex_araneus
ENSVPAG00000010492	-	80	92.512	ENSSPUG00000000590	SMARCA1	75	92.512	Sphenodon_punctatus
ENSVPAG00000010492	-	77	87.197	ENSSPAG00000002894	smarca5	74	86.835	Stegastes_partitus
ENSVPAG00000010492	-	81	99.683	ENSSSCG00000012649	SMARCA1	78	99.683	Sus_scrofa
ENSVPAG00000010492	-	77	93.127	ENSTGUG00000003899	-	78	92.754	Taeniopygia_guttata
ENSVPAG00000010492	-	77	86.505	ENSTRUG00000014094	smarca5	73	85.990	Takifugu_rubripes
ENSVPAG00000010492	-	77	86.851	ENSTNIG00000017717	smarca5	73	86.513	Tetraodon_nigroviridis
ENSVPAG00000010492	-	80	98.730	ENSTBEG00000014973	SMARCA1	78	98.730	Tupaia_belangeri
ENSVPAG00000010492	-	86	98.095	ENSTTRG00000006168	SMARCA1	84	98.095	Tursiops_truncatus
ENSVPAG00000010492	-	80	99.675	ENSUAMG00000020201	SMARCA1	76	99.675	Ursus_americanus
ENSVPAG00000010492	-	81	99.274	ENSUMAG00000004073	SMARCA1	94	99.246	Ursus_maritimus
ENSVPAG00000010492	-	79	99.675	ENSVVUG00000008878	SMARCA1	80	99.353	Vulpes_vulpes
ENSVPAG00000010492	-	77	90.821	ENSXETG00000001526	smarca1	77	90.821	Xenopus_tropicalis
ENSVPAG00000010492	-	77	87.543	ENSXCOG00000011170	smarca5	75	86.842	Xiphophorus_couchianus
ENSVPAG00000010492	-	77	87.543	ENSXMAG00000009678	smarca5	78	86.280	Xiphophorus_maculatus