EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVPAG00000011108 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 668 bases
Position: chrscaffold_14536:6499-7166
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000010345	APOBEC_N	PF08210.11	2.4e-31	1	1
ENSVPAP00000010345	APOBEC_C	PF05240.14	6.9e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000011108	-	381	-	ENSVPAP00000010345	127 (aa)	-	UPI00018BC435

Gene Model

Click here to download ENSVPAG00000011108's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000011108's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVPAG00000011108	-	98	35.433	ENSVPAG00000003950	AICDA	86	35.433

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000011108	-	98	51.538	ENSG00000100298	APOBEC3H	71	51.538	Homo_sapiens
ENSVPAG00000011108	-	99	54.545	ENSAMEG00000010818	-	58	54.545	Ailuropoda_melanoleuca
ENSVPAG00000011108	-	98	55.725	ENSANAG00000025410	APOBEC3H	58	55.725	Aotus_nancymaae
ENSVPAG00000011108	-	100	63.281	ENSBTAG00000007755	APOBEC3H	65	63.780	Bos_taurus
ENSVPAG00000011108	-	97	55.039	ENSCJAG00000012524	APOBEC3H	66	55.039	Callithrix_jacchus
ENSVPAG00000011108	-	99	59.843	ENSCAFG00000001361	APOBEC3Z3	66	59.843	Canis_familiaris
ENSVPAG00000011108	-	99	59.055	ENSCAFG00020002584	-	66	59.055	Canis_lupus_dingo
ENSVPAG00000011108	-	99	64.567	ENSCHIG00000026580	-	67	64.567	Capra_hircus
ENSVPAG00000011108	-	96	54.098	ENSTSYG00000032894	-	72	54.098	Carlito_syrichta
ENSVPAG00000011108	-	99	53.543	ENSCPOG00000009257	-	55	53.543	Cavia_porcellus
ENSVPAG00000011108	-	98	55.725	ENSCCAG00000008525	APOBEC3H	64	55.725	Cebus_capucinus
ENSVPAG00000011108	-	98	56.923	ENSCATG00000030302	APOBEC3H	72	56.923	Cercocebus_atys
ENSVPAG00000011108	-	99	52.344	ENSCLAG00000016615	-	63	52.344	Chinchilla_lanigera
ENSVPAG00000011108	-	98	53.846	ENSCSAG00000006371	APOBEC3H	62	53.846	Chlorocebus_sabaeus
ENSVPAG00000011108	-	99	48.800	ENSCGRG00001022976	Apobec3	56	48.800	Cricetulus_griseus_chok1gshd
ENSVPAG00000011108	-	99	48.800	ENSCGRG00000005621	Apobec3	65	48.800	Cricetulus_griseus_crigri
ENSVPAG00000011108	-	99	56.349	ENSDORG00000027271	-	100	38.144	Dipodomys_ordii
ENSVPAG00000011108	-	99	58.268	ENSECAG00000007726	APOBEC3H	55	58.268	Equus_caballus
ENSVPAG00000011108	-	99	59.055	ENSFCAG00000005251	APOBEC3Z3	66	59.055	Felis_catus
ENSVPAG00000011108	-	99	51.163	ENSSTOG00000007125	-	62	51.163	Ictidomys_tridecemlineatus
ENSVPAG00000011108	-	87	52.326	ENSJJAG00000016840	-	53	52.326	Jaculus_jaculus
ENSVPAG00000011108	-	98	51.613	ENSLAFG00000027404	-	61	51.613	Loxodonta_africana
ENSVPAG00000011108	-	98	56.923	ENSMFAG00000031827	APOBEC3H	65	56.923	Macaca_fascicularis
ENSVPAG00000011108	-	98	53.846	ENSMMUG00000001016	APOBEC3H	56	60.920	Macaca_mulatta
ENSVPAG00000011108	-	98	56.154	ENSMNEG00000039259	APOBEC3H	65	56.154	Macaca_nemestrina
ENSVPAG00000011108	-	98	55.385	ENSMLEG00000033417	APOBEC3H	65	55.385	Mandrillus_leucophaeus
ENSVPAG00000011108	-	98	49.600	ENSMAUG00000011683	Apobec3	58	49.600	Mesocricetus_auratus
ENSVPAG00000011108	-	99	48.800	ENSMOCG00000021576	Apobec3	58	48.800	Microtus_ochrogaster
ENSVPAG00000011108	-	98	46.429	MGP_CAROLIEiJ_G0020029	Apobec3	88	45.333	Mus_caroli
ENSVPAG00000011108	-	98	46.847	ENSMUSG00000009585	Apobec3	88	45.333	Mus_musculus
ENSVPAG00000011108	-	98	46.774	MGP_PahariEiJ_G0020031	-	62	46.774	Mus_pahari
ENSVPAG00000011108	-	98	47.581	MGP_SPRETEiJ_G0020927	Apobec3	98	43.373	Mus_spretus
ENSVPAG00000011108	-	99	56.693	ENSMPUG00000013239	-	65	56.693	Mustela_putorius_furo
ENSVPAG00000011108	-	99	52.000	ENSNGAG00000018998	Apobec3	75	51.200	Nannospalax_galili
ENSVPAG00000011108	-	98	53.846	ENSNLEG00000015218	-	62	53.846	Nomascus_leucogenys
ENSVPAG00000011108	-	97	48.936	ENSOCUG00000023913	-	53	48.936	Oryctolagus_cuniculus
ENSVPAG00000011108	-	99	65.354	ENSOARG00000016290	APOBEC3F	67	65.354	Ovis_aries
ENSVPAG00000011108	-	98	52.308	ENSPPAG00000036522	APOBEC3H	71	52.308	Pan_paniscus
ENSVPAG00000011108	-	99	58.268	ENSPPRG00000003941	-	65	58.268	Panthera_pardus
ENSVPAG00000011108	-	97	36.290	ENSPPRG00000003675	-	64	36.290	Panthera_pardus
ENSVPAG00000011108	-	99	59.055	ENSPTIG00000010283	-	65	59.055	Panthera_tigris_altaica
ENSVPAG00000011108	-	98	52.308	ENSPTRG00000014390	APOBEC3H	71	52.308	Pan_troglodytes
ENSVPAG00000011108	-	98	56.923	ENSPANG00000010774	APOBEC3H	67	53.077	Papio_anubis
ENSVPAG00000011108	-	99	48.000	ENSPEMG00000000456	Apobec3	58	48.000	Peromyscus_maniculatus_bairdii
ENSVPAG00000011108	-	98	53.077	ENSPPYG00000011834	-	62	53.077	Pongo_abelii
ENSVPAG00000011108	-	97	56.452	ENSPCAG00000015655	-	71	56.452	Procavia_capensis
ENSVPAG00000011108	-	99	56.693	ENSPVAG00000009462	-	72	56.693	Pteropus_vampyrus
ENSVPAG00000011108	-	97	37.903	ENSPVAG00000024161	-	94	37.903	Pteropus_vampyrus
ENSVPAG00000011108	-	97	35.484	ENSPVAG00000024267	-	94	35.484	Pteropus_vampyrus
ENSVPAG00000011108	-	98	44.355	ENSRNOG00000016852	Apobec3	57	44.355	Rattus_norvegicus
ENSVPAG00000011108	-	98	56.154	ENSRBIG00000029088	APOBEC3H	65	56.154	Rhinopithecus_bieti
ENSVPAG00000011108	-	98	56.923	ENSRROG00000024699	APOBEC3H	65	56.923	Rhinopithecus_roxellana
ENSVPAG00000011108	-	98	54.962	ENSSBOG00000030005	APOBEC3H	71	54.962	Saimiri_boliviensis_boliviensis
ENSVPAG00000011108	-	99	70.079	ENSSSCG00000000091	APOBEC3B	60	70.079	Sus_scrofa
ENSVPAG00000011108	-	99	56.693	ENSTBEG00000001532	-	75	56.693	Tupaia_belangeri
ENSVPAG00000011108	-	99	72.441	ENSTTRG00000001266	-	71	72.441	Tursiops_truncatus
ENSVPAG00000011108	-	98	58.400	ENSUAMG00000004427	-	57	58.400	Ursus_americanus
ENSVPAG00000011108	-	99	58.268	ENSUMAG00000014435	-	65	58.268	Ursus_maritimus