EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000011145 (Gene tree)
Gene ID: -
Gene Symbol: LSM12
Alias: FLJ30656
Full Name: LSM12 homolog
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 16865 bases
Position: chrGeneScaffold_2288:17166-34030
Accession: 26407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000010378	AD	PF09793.9	9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000011145	LSM12-201	588	-	ENSVPAP00000010378	195 (aa)	-	UPI00018BC91E

Gene Model

Click here to download ENSVPAG00000011145's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000011145's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000011145	LSM12	100	94.359	ENSG00000161654	LSM12	100	94.359	Homo_sapiens
ENSVPAG00000011145	LSM12	100	81.633	ENSAPOG00000007907	lsm12b	100	81.633	Acanthochromis_polyacanthus
ENSVPAG00000011145	LSM12	100	92.424	ENSAMEG00000018321	LSM12	100	92.424	Ailuropoda_melanoleuca
ENSVPAG00000011145	LSM12	100	79.592	ENSACIG00000008538	lsm12b	100	79.592	Amphilophus_citrinellus
ENSVPAG00000011145	LSM12	100	81.122	ENSAOCG00000021847	lsm12b	88	81.122	Amphiprion_ocellaris
ENSVPAG00000011145	LSM12	100	81.122	ENSAPEG00000002252	lsm12b	100	81.122	Amphiprion_percula
ENSVPAG00000011145	LSM12	100	80.612	ENSATEG00000005705	lsm12b	100	80.612	Anabas_testudineus
ENSVPAG00000011145	LSM12	99	88.083	ENSACAG00000004618	LSM12	99	88.083	Anolis_carolinensis
ENSVPAG00000011145	LSM12	100	94.359	ENSANAG00000029011	LSM12	100	94.359	Aotus_nancymaae
ENSVPAG00000011145	LSM12	100	80.102	ENSACLG00000026332	lsm12b	100	80.102	Astatotilapia_calliptera
ENSVPAG00000011145	LSM12	100	73.469	ENSAMXG00000036117	lsm12a	91	73.469	Astyanax_mexicanus
ENSVPAG00000011145	LSM12	100	79.592	ENSAMXG00000032952	lsm12b	100	79.592	Astyanax_mexicanus
ENSVPAG00000011145	LSM12	100	94.359	ENSBTAG00000016252	LSM12	100	94.359	Bos_taurus
ENSVPAG00000011145	LSM12	100	94.359	ENSCJAG00000048480	LSM12	100	94.359	Callithrix_jacchus
ENSVPAG00000011145	LSM12	100	94.359	ENSCAFG00000014379	LSM12	92	94.359	Canis_familiaris
ENSVPAG00000011145	LSM12	100	94.359	ENSCAFG00020012173	LSM12	100	94.359	Canis_lupus_dingo
ENSVPAG00000011145	LSM12	100	94.359	ENSCHIG00000018175	LSM12	100	94.359	Capra_hircus
ENSVPAG00000011145	LSM12	100	94.359	ENSTSYG00000036361	LSM12	100	94.359	Carlito_syrichta
ENSVPAG00000011145	LSM12	83	87.654	ENSCAPG00000009647	LSM12	89	87.654	Cavia_aperea
ENSVPAG00000011145	LSM12	100	92.308	ENSCPOG00000012860	LSM12	100	92.308	Cavia_porcellus
ENSVPAG00000011145	LSM12	100	94.359	ENSCCAG00000032905	LSM12	100	94.359	Cebus_capucinus
ENSVPAG00000011145	LSM12	100	94.359	ENSCATG00000030577	-	100	94.359	Cercocebus_atys
ENSVPAG00000011145	LSM12	100	93.333	ENSCLAG00000015759	LSM12	100	93.333	Chinchilla_lanigera
ENSVPAG00000011145	LSM12	100	94.872	ENSCSAG00000003486	LSM12	100	94.872	Chlorocebus_sabaeus
ENSVPAG00000011145	LSM12	56	88.991	ENSCHOG00000001198	LSM12	100	88.991	Choloepus_hoffmanni
ENSVPAG00000011145	LSM12	99	88.601	ENSCPBG00000027105	LSM12	99	88.601	Chrysemys_picta_bellii
ENSVPAG00000011145	LSM12	100	94.359	ENSCANG00000043328	LSM12	100	94.359	Colobus_angolensis_palliatus
ENSVPAG00000011145	LSM12	100	94.359	ENSCGRG00001002094	Lsm12	100	94.359	Cricetulus_griseus_chok1gshd
ENSVPAG00000011145	LSM12	86	86.310	ENSCGRG00000004316	Lsm12	95	86.310	Cricetulus_griseus_crigri
ENSVPAG00000011145	LSM12	100	80.102	ENSCSEG00000008434	lsm12b	100	80.102	Cynoglossus_semilaevis
ENSVPAG00000011145	LSM12	100	80.102	ENSCVAG00000008755	lsm12b	100	80.102	Cyprinodon_variegatus
ENSVPAG00000011145	LSM12	100	80.102	ENSDARG00000109510	lsm12b	100	80.102	Danio_rerio
ENSVPAG00000011145	LSM12	100	71.429	ENSDARG00000028848	lsm12a	100	71.429	Danio_rerio
ENSVPAG00000011145	LSM12	100	93.846	ENSDNOG00000002418	LSM12	91	93.846	Dasypus_novemcinctus
ENSVPAG00000011145	LSM12	100	94.359	ENSDORG00000016381	Lsm12	100	94.359	Dipodomys_ordii
ENSVPAG00000011145	LSM12	83	31.325	FBgn0030364	Lsm12	76	31.138	Drosophila_melanogaster
ENSVPAG00000011145	LSM12	100	93.846	ENSETEG00000008374	LSM12	100	93.846	Echinops_telfairi
ENSVPAG00000011145	LSM12	90	82.286	ENSETEG00000011012	-	100	82.286	Echinops_telfairi
ENSVPAG00000011145	LSM12	84	57.927	ENSEBUG00000016299	lsm12a	92	57.927	Eptatretus_burgeri
ENSVPAG00000011145	LSM12	100	94.359	ENSEASG00005010155	LSM12	100	94.359	Equus_asinus_asinus
ENSVPAG00000011145	LSM12	100	94.359	ENSECAG00000009071	LSM12	100	94.359	Equus_caballus
ENSVPAG00000011145	LSM12	78	91.503	ENSEEUG00000002419	-	100	91.503	Erinaceus_europaeus
ENSVPAG00000011145	LSM12	100	77.551	ENSELUG00000000256	-	100	77.551	Esox_lucius
ENSVPAG00000011145	LSM12	100	79.592	ENSELUG00000015538	lsm12b	100	78.571	Esox_lucius
ENSVPAG00000011145	LSM12	100	94.359	ENSFCAG00000037021	LSM12	100	94.359	Felis_catus
ENSVPAG00000011145	LSM12	76	91.892	ENSFDAG00000008954	LSM12	87	91.892	Fukomys_damarensis
ENSVPAG00000011145	LSM12	100	79.082	ENSFHEG00000019913	lsm12b	100	79.082	Fundulus_heteroclitus
ENSVPAG00000011145	LSM12	81	78.481	ENSGMOG00000015449	lsm12b	100	78.481	Gadus_morhua
ENSVPAG00000011145	LSM12	78	86.928	ENSGALG00000039803	LSM12	100	86.928	Gallus_gallus
ENSVPAG00000011145	LSM12	100	79.592	ENSGAFG00000011829	lsm12b	100	79.592	Gambusia_affinis
ENSVPAG00000011145	LSM12	81	79.114	ENSGACG00000003428	lsm12b	100	79.114	Gasterosteus_aculeatus
ENSVPAG00000011145	LSM12	99	88.601	ENSGAGG00000021965	LSM12	99	88.601	Gopherus_agassizii
ENSVPAG00000011145	LSM12	100	94.359	ENSGGOG00000010589	-	100	94.359	Gorilla_gorilla
ENSVPAG00000011145	LSM12	85	79.641	ENSHBUG00000007667	lsm12b	74	79.641	Haplochromis_burtoni
ENSVPAG00000011145	LSM12	100	94.359	ENSHGLG00000011411	LSM12	100	94.359	Heterocephalus_glaber_female
ENSVPAG00000011145	LSM12	91	81.215	ENSHGLG00100000241	LSM12	96	81.215	Heterocephalus_glaber_male
ENSVPAG00000011145	LSM12	100	79.592	ENSHCOG00000002094	lsm12b	100	79.592	Hippocampus_comes
ENSVPAG00000011145	LSM12	100	80.102	ENSIPUG00000014800	lsm12	100	80.102	Ictalurus_punctatus
ENSVPAG00000011145	LSM12	99	70.619	ENSIPUG00000008936	lsm12a	99	70.619	Ictalurus_punctatus
ENSVPAG00000011145	LSM12	100	94.359	ENSSTOG00000007403	LSM12	100	94.359	Ictidomys_tridecemlineatus
ENSVPAG00000011145	LSM12	81	78.616	ENSJJAG00000014652	-	95	78.616	Jaculus_jaculus
ENSVPAG00000011145	LSM12	100	93.333	ENSJJAG00000004364	-	100	93.333	Jaculus_jaculus
ENSVPAG00000011145	LSM12	97	82.632	ENSJJAG00000011793	-	100	82.632	Jaculus_jaculus
ENSVPAG00000011145	LSM12	85	80.838	ENSKMAG00000007704	lsm12b	56	80.838	Kryptolebias_marmoratus
ENSVPAG00000011145	LSM12	100	81.122	ENSLBEG00000027999	lsm12b	100	81.122	Labrus_bergylta
ENSVPAG00000011145	LSM12	99	84.456	ENSLACG00000015981	LSM12	99	84.456	Latimeria_chalumnae
ENSVPAG00000011145	LSM12	100	79.082	ENSLOCG00000013079	lsm12b	99	79.082	Lepisosteus_oculatus
ENSVPAG00000011145	LSM12	100	94.359	ENSLAFG00000005202	LSM12	100	94.359	Loxodonta_africana
ENSVPAG00000011145	LSM12	100	94.359	ENSMFAG00000031376	LSM12	100	94.359	Macaca_fascicularis
ENSVPAG00000011145	LSM12	100	94.359	ENSMMUG00000006804	LSM12	100	94.359	Macaca_mulatta
ENSVPAG00000011145	LSM12	65	80.460	ENSMMUG00000038408	-	100	80.460	Macaca_mulatta
ENSVPAG00000011145	LSM12	65	80.460	ENSMMUG00000042106	-	100	80.460	Macaca_mulatta
ENSVPAG00000011145	LSM12	100	94.359	ENSMNEG00000030594	-	100	94.359	Macaca_nemestrina
ENSVPAG00000011145	LSM12	100	94.359	ENSMLEG00000039934	LSM12	100	94.359	Mandrillus_leucophaeus
ENSVPAG00000011145	LSM12	100	80.612	ENSMAMG00000004279	lsm12b	100	80.612	Mastacembelus_armatus
ENSVPAG00000011145	LSM12	100	80.102	ENSMZEG00005005754	lsm12b	100	80.102	Maylandia_zebra
ENSVPAG00000011145	LSM12	100	94.872	ENSMICG00000037219	LSM12	100	94.872	Microcebus_murinus
ENSVPAG00000011145	LSM12	100	79.487	ENSMOCG00000017015	-	86	79.487	Microtus_ochrogaster
ENSVPAG00000011145	LSM12	100	94.359	ENSMOCG00000019878	-	100	94.359	Microtus_ochrogaster
ENSVPAG00000011145	LSM12	100	80.612	ENSMMOG00000020848	lsm12b	100	80.612	Mola_mola
ENSVPAG00000011145	LSM12	100	80.612	ENSMALG00000007578	lsm12b	100	80.612	Monopterus_albus
ENSVPAG00000011145	LSM12	100	93.846	MGP_CAROLIEiJ_G0017241	Lsm12	100	93.846	Mus_caroli
ENSVPAG00000011145	LSM12	100	94.359	ENSMUSG00000020922	Lsm12	100	94.359	Mus_musculus
ENSVPAG00000011145	LSM12	100	86.792	MGP_PahariEiJ_G0018371	Lsm12	100	90.323	Mus_pahari
ENSVPAG00000011145	LSM12	100	93.846	MGP_SPRETEiJ_G0018084	Lsm12	99	100.000	Mus_spretus
ENSVPAG00000011145	LSM12	100	93.846	ENSMLUG00000006391	LSM12	100	93.846	Myotis_lucifugus
ENSVPAG00000011145	LSM12	100	94.359	ENSNGAG00000001870	Lsm12	100	94.359	Nannospalax_galili
ENSVPAG00000011145	LSM12	100	61.881	ENSNGAG00000015429	-	100	61.881	Nannospalax_galili
ENSVPAG00000011145	LSM12	100	80.102	ENSNBRG00000006266	lsm12b	100	80.102	Neolamprologus_brichardi
ENSVPAG00000011145	LSM12	100	94.359	ENSNLEG00000005580	-	100	94.359	Nomascus_leucogenys
ENSVPAG00000011145	LSM12	85	92.121	ENSMEUG00000007501	-	100	92.121	Notamacropus_eugenii
ENSVPAG00000011145	LSM12	100	94.359	ENSOPRG00000008552	LSM12	100	94.359	Ochotona_princeps
ENSVPAG00000011145	LSM12	100	83.077	ENSODEG00000007886	-	74	83.077	Octodon_degus
ENSVPAG00000011145	LSM12	100	92.821	ENSODEG00000017998	-	100	92.821	Octodon_degus
ENSVPAG00000011145	LSM12	100	80.102	ENSONIG00000007933	lsm12b	100	80.102	Oreochromis_niloticus
ENSVPAG00000011145	LSM12	99	87.113	ENSOCUG00000024823	-	100	87.113	Oryctolagus_cuniculus
ENSVPAG00000011145	LSM12	99	87.629	ENSOCUG00000027889	-	100	87.629	Oryctolagus_cuniculus
ENSVPAG00000011145	LSM12	100	92.424	ENSOCUG00000008566	-	100	92.424	Oryctolagus_cuniculus
ENSVPAG00000011145	LSM12	99	87.629	ENSOCUG00000021254	-	100	87.629	Oryctolagus_cuniculus
ENSVPAG00000011145	LSM12	100	80.612	ENSORLG00000011310	lsm12b	100	80.612	Oryzias_latipes
ENSVPAG00000011145	LSM12	100	80.612	ENSORLG00020002060	lsm12b	92	80.612	Oryzias_latipes_hni
ENSVPAG00000011145	LSM12	100	80.612	ENSORLG00015001647	lsm12b	92	80.612	Oryzias_latipes_hsok
ENSVPAG00000011145	LSM12	100	80.612	ENSOMEG00000006184	lsm12b	92	80.612	Oryzias_melastigma
ENSVPAG00000011145	LSM12	100	94.872	ENSOGAG00000010489	LSM12	100	94.872	Otolemur_garnettii
ENSVPAG00000011145	LSM12	100	91.045	ENSOARG00000006589	LSM12	100	91.045	Ovis_aries
ENSVPAG00000011145	LSM12	100	84.103	ENSPPAG00000034974	-	92	100.000	Pan_paniscus
ENSVPAG00000011145	LSM12	100	94.359	ENSPPRG00000023420	LSM12	100	94.359	Panthera_pardus
ENSVPAG00000011145	LSM12	72	90.323	ENSPTIG00000014850	-	100	90.323	Panthera_tigris_altaica
ENSVPAG00000011145	LSM12	78	92.810	ENSPTIG00000012704	-	82	92.810	Panthera_tigris_altaica
ENSVPAG00000011145	LSM12	100	94.359	ENSPTRG00000009261	LSM12	100	94.359	Pan_troglodytes
ENSVPAG00000011145	LSM12	100	94.359	ENSPANG00000021315	-	100	94.359	Papio_anubis
ENSVPAG00000011145	LSM12	100	80.612	ENSPKIG00000021058	lsm12b	100	80.612	Paramormyrops_kingsleyae
ENSVPAG00000011145	LSM12	99	71.134	ENSPKIG00000017932	-	99	71.134	Paramormyrops_kingsleyae
ENSVPAG00000011145	LSM12	100	80.102	ENSPMGG00000021344	lsm12b	100	80.102	Periophthalmus_magnuspinnatus
ENSVPAG00000011145	LSM12	100	94.359	ENSPEMG00000012199	Lsm12	100	94.359	Peromyscus_maniculatus_bairdii
ENSVPAG00000011145	LSM12	88	61.628	ENSPMAG00000005461	lsm12a	99	61.628	Petromyzon_marinus
ENSVPAG00000011145	LSM12	100	91.282	ENSPCIG00000020244	LSM12	100	91.282	Phascolarctos_cinereus
ENSVPAG00000011145	LSM12	100	78.571	ENSPFOG00000015930	lsm12b	100	78.571	Poecilia_formosa
ENSVPAG00000011145	LSM12	100	78.571	ENSPLAG00000021089	lsm12b	100	78.571	Poecilia_latipinna
ENSVPAG00000011145	LSM12	100	78.571	ENSPMEG00000012961	lsm12b	100	78.571	Poecilia_mexicana
ENSVPAG00000011145	LSM12	88	80.117	ENSPREG00000010236	lsm12b	95	80.117	Poecilia_reticulata
ENSVPAG00000011145	LSM12	100	94.359	ENSPPYG00000008344	LSM12	100	94.359	Pongo_abelii
ENSVPAG00000011145	LSM12	82	93.082	ENSPCAG00000008790	LSM12	100	93.082	Procavia_capensis
ENSVPAG00000011145	LSM12	100	94.359	ENSPCOG00000027951	LSM12	100	94.359	Propithecus_coquereli
ENSVPAG00000011145	LSM12	100	93.846	ENSPVAG00000013706	LSM12	100	93.846	Pteropus_vampyrus
ENSVPAG00000011145	LSM12	100	80.102	ENSPNYG00000003386	lsm12b	100	80.102	Pundamilia_nyererei
ENSVPAG00000011145	LSM12	100	71.429	ENSPNAG00000018435	lsm12a	100	71.429	Pygocentrus_nattereri
ENSVPAG00000011145	LSM12	100	78.061	ENSPNAG00000004186	lsm12b	100	78.061	Pygocentrus_nattereri
ENSVPAG00000011145	LSM12	100	94.359	ENSRNOG00000020894	Lsm12	100	94.359	Rattus_norvegicus
ENSVPAG00000011145	LSM12	100	94.359	ENSRBIG00000027910	LSM12	100	94.359	Rhinopithecus_bieti
ENSVPAG00000011145	LSM12	100	94.359	ENSRROG00000045530	-	100	94.359	Rhinopithecus_roxellana
ENSVPAG00000011145	LSM12	100	54.872	ENSRROG00000000537	-	100	54.872	Rhinopithecus_roxellana
ENSVPAG00000011145	LSM12	100	94.359	ENSSBOG00000025310	LSM12	100	94.359	Saimiri_boliviensis_boliviensis
ENSVPAG00000011145	LSM12	81	87.342	ENSSHAG00000014914	LSM12	100	87.342	Sarcophilus_harrisii
ENSVPAG00000011145	LSM12	100	78.571	ENSSFOG00015020392	lsm12a	100	78.571	Scleropages_formosus
ENSVPAG00000011145	LSM12	100	80.612	ENSSFOG00015009612	lsm12	100	80.612	Scleropages_formosus
ENSVPAG00000011145	LSM12	100	80.612	ENSSMAG00000008089	lsm12b	100	80.612	Scophthalmus_maximus
ENSVPAG00000011145	LSM12	100	81.633	ENSSDUG00000012711	lsm12b	100	81.633	Seriola_dumerili
ENSVPAG00000011145	LSM12	100	81.633	ENSSLDG00000007404	lsm12b	100	81.633	Seriola_lalandi_dorsalis
ENSVPAG00000011145	LSM12	78	92.157	ENSSARG00000005537	LSM12	100	92.157	Sorex_araneus
ENSVPAG00000011145	LSM12	99	90.155	ENSSPUG00000011984	LSM12	99	90.155	Sphenodon_punctatus
ENSVPAG00000011145	LSM12	100	81.122	ENSSPAG00000017058	lsm12b	100	81.122	Stegastes_partitus
ENSVPAG00000011145	LSM12	100	94.359	ENSSSCG00000032394	LSM12	100	94.359	Sus_scrofa
ENSVPAG00000011145	LSM12	100	79.592	ENSTRUG00000007121	lsm12b	100	79.592	Takifugu_rubripes
ENSVPAG00000011145	LSM12	100	80.102	ENSTNIG00000014436	lsm12b	100	80.102	Tetraodon_nigroviridis
ENSVPAG00000011145	LSM12	100	93.846	ENSTBEG00000012523	-	100	93.846	Tupaia_belangeri
ENSVPAG00000011145	LSM12	100	90.769	ENSTBEG00000012392	-	100	90.769	Tupaia_belangeri
ENSVPAG00000011145	LSM12	100	94.359	ENSTTRG00000010433	LSM12	100	94.359	Tursiops_truncatus
ENSVPAG00000011145	LSM12	100	94.359	ENSUAMG00000006313	LSM12	100	94.359	Ursus_americanus
ENSVPAG00000011145	LSM12	83	87.654	ENSUMAG00000012987	LSM12	92	87.654	Ursus_maritimus
ENSVPAG00000011145	LSM12	100	94.359	ENSVVUG00000017581	LSM12	100	94.359	Vulpes_vulpes
ENSVPAG00000011145	LSM12	82	58.750	ENSXETG00000003371	lsm12	77	58.750	Xenopus_tropicalis
ENSVPAG00000011145	LSM12	100	79.592	ENSXCOG00000003994	lsm12b	100	79.592	Xiphophorus_couchianus
ENSVPAG00000011145	LSM12	100	79.592	ENSXMAG00000020950	lsm12b	100	79.592	Xiphophorus_maculatus