EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000011331 (Gene tree)
Gene ID: -
Gene Symbol: HFM1
Alias: FLJ36760|FLJ39011|MER3|SEC63D1
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 84597 bases
Position: chrGeneScaffold_2330:75609-160205
Accession: 20193
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000010550	ResIII	PF04851.15	1e-11	1	1
ENSVPAP00000010550	DEAD	PF00270.29	5.8e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000011331	HFM1-201	4308	-	ENSVPAP00000010550	1435 (aa)	-	UPI00018BD477

Gene Model

Click here to download ENSVPAG00000011331's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000011331's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000011331	HFM1	93	84.235	ENSG00000162669	HFM1	93	84.235	Homo_sapiens
ENSVPAG00000011331	HFM1	58	63.876	ENSAPOG00000005304	hfm1	94	63.876	Acanthochromis_polyacanthus
ENSVPAG00000011331	HFM1	93	88.525	ENSAMEG00000000432	HFM1	93	88.525	Ailuropoda_melanoleuca
ENSVPAG00000011331	HFM1	71	58.325	ENSACIG00000021553	hfm1	92	58.325	Amphilophus_citrinellus
ENSVPAG00000011331	HFM1	58	64.269	ENSAOCG00000022839	hfm1	96	66.583	Amphiprion_ocellaris
ENSVPAG00000011331	HFM1	58	64.029	ENSAPEG00000014316	hfm1	96	66.751	Amphiprion_percula
ENSVPAG00000011331	HFM1	67	62.397	ENSATEG00000019181	hfm1	80	61.530	Anabas_testudineus
ENSVPAG00000011331	HFM1	93	62.500	ENSAPLG00000013639	HFM1	93	62.500	Anas_platyrhynchos
ENSVPAG00000011331	HFM1	93	80.564	ENSANAG00000029513	HFM1	93	80.564	Aotus_nancymaae
ENSVPAG00000011331	HFM1	70	57.579	ENSACLG00000009033	hfm1	96	62.710	Astatotilapia_calliptera
ENSVPAG00000011331	HFM1	73	59.032	ENSAMXG00000006108	hfm1	73	59.032	Astyanax_mexicanus
ENSVPAG00000011331	HFM1	93	86.588	ENSBTAG00000020856	HFM1	93	86.588	Bos_taurus
ENSVPAG00000011331	HFM1	93	82.745	ENSCJAG00000001843	HFM1	93	82.745	Callithrix_jacchus
ENSVPAG00000011331	HFM1	93	85.333	ENSCAFG00000020187	HFM1	93	85.333	Canis_familiaris
ENSVPAG00000011331	HFM1	93	82.459	ENSTSYG00000014250	HFM1	93	82.459	Carlito_syrichta
ENSVPAG00000011331	HFM1	92	77.551	ENSCPOG00000007421	HFM1	93	77.630	Cavia_porcellus
ENSVPAG00000011331	HFM1	93	82.588	ENSCCAG00000033206	HFM1	93	82.588	Cebus_capucinus
ENSVPAG00000011331	HFM1	93	83.294	ENSCATG00000030987	HFM1	93	83.294	Cercocebus_atys
ENSVPAG00000011331	HFM1	93	78.939	ENSCLAG00000005173	HFM1	93	78.939	Chinchilla_lanigera
ENSVPAG00000011331	HFM1	68	93.421	ENSCHOG00000011824	-	77	93.421	Choloepus_hoffmanni
ENSVPAG00000011331	HFM1	93	72.586	ENSCGRG00001016995	Hfm1	93	72.586	Cricetulus_griseus_chok1gshd
ENSVPAG00000011331	HFM1	93	77.194	ENSCGRG00000017181	Hfm1	93	77.194	Cricetulus_griseus_crigri
ENSVPAG00000011331	HFM1	71	57.824	ENSCSEG00000017659	hfm1	94	57.824	Cynoglossus_semilaevis
ENSVPAG00000011331	HFM1	50	66.199	ENSCVAG00000005075	hfm1	86	66.199	Cyprinodon_variegatus
ENSVPAG00000011331	HFM1	60	64.452	ENSDARG00000104288	hfm1	77	64.452	Danio_rerio
ENSVPAG00000011331	HFM1	93	79.394	ENSDNOG00000004776	HFM1	93	79.394	Dasypus_novemcinctus
ENSVPAG00000011331	HFM1	93	76.703	ENSDORG00000014661	Hfm1	93	76.703	Dipodomys_ordii
ENSVPAG00000011331	HFM1	71	84.956	ENSEASG00005015424	HFM1	97	84.956	Equus_asinus_asinus
ENSVPAG00000011331	HFM1	93	85.246	ENSECAG00000024039	HFM1	93	85.246	Equus_caballus
ENSVPAG00000011331	HFM1	63	65.934	ENSELUG00000018944	hfm1	97	65.934	Esox_lucius
ENSVPAG00000011331	HFM1	93	85.737	ENSFCAG00000029116	HFM1	93	85.737	Felis_catus
ENSVPAG00000011331	HFM1	89	63.138	ENSFALG00000001781	HFM1	92	63.138	Ficedula_albicollis
ENSVPAG00000011331	HFM1	93	77.820	ENSFDAG00000020816	HFM1	93	77.820	Fukomys_damarensis
ENSVPAG00000011331	HFM1	66	59.290	ENSGMOG00000017436	hfm1	100	59.290	Gadus_morhua
ENSVPAG00000011331	HFM1	71	59.480	ENSGAFG00000018093	hfm1	92	65.006	Gambusia_affinis
ENSVPAG00000011331	HFM1	66	59.462	ENSGACG00000015686	hfm1	100	59.462	Gasterosteus_aculeatus
ENSVPAG00000011331	HFM1	93	84.000	ENSGGOG00000038524	HFM1	93	84.000	Gorilla_gorilla
ENSVPAG00000011331	HFM1	65	62.379	ENSHBUG00000007309	hfm1	95	58.430	Haplochromis_burtoni
ENSVPAG00000011331	HFM1	57	61.765	ENSHCOG00000019632	hfm1	97	61.765	Hippocampus_comes
ENSVPAG00000011331	HFM1	70	60.454	ENSIPUG00000017020	hfm1	92	64.447	Ictalurus_punctatus
ENSVPAG00000011331	HFM1	93	76.019	ENSJJAG00000017198	Hfm1	93	76.019	Jaculus_jaculus
ENSVPAG00000011331	HFM1	62	60.908	ENSKMAG00000002282	hfm1	90	60.908	Kryptolebias_marmoratus
ENSVPAG00000011331	HFM1	71	57.352	ENSLBEG00000006759	hfm1	96	63.202	Labrus_bergylta
ENSVPAG00000011331	HFM1	71	65.099	ENSLACG00000010698	HFM1	100	65.193	Latimeria_chalumnae
ENSVPAG00000011331	HFM1	72	63.292	ENSLOCG00000004931	hfm1	97	63.387	Lepisosteus_oculatus
ENSVPAG00000011331	HFM1	51	90.040	ENSLAFG00000015903	-	99	90.040	Loxodonta_africana
ENSVPAG00000011331	HFM1	93	81.967	ENSMFAG00000003649	HFM1	93	81.967	Macaca_fascicularis
ENSVPAG00000011331	HFM1	93	83.216	ENSMMUG00000006819	HFM1	93	83.216	Macaca_mulatta
ENSVPAG00000011331	HFM1	54	67.137	ENSMAMG00000004623	hfm1	97	64.010	Mastacembelus_armatus
ENSVPAG00000011331	HFM1	70	57.579	ENSMZEG00005004679	hfm1	96	62.710	Maylandia_zebra
ENSVPAG00000011331	HFM1	54	74.490	ENSMGAG00000008437	HFM1	98	74.490	Meleagris_gallopavo
ENSVPAG00000011331	HFM1	93	76.977	ENSMAUG00000018858	Hfm1	93	76.977	Mesocricetus_auratus
ENSVPAG00000011331	HFM1	93	83.634	ENSMICG00000037935	HFM1	93	83.634	Microcebus_murinus
ENSVPAG00000011331	HFM1	93	75.843	ENSMOCG00000014812	Hfm1	93	75.843	Microtus_ochrogaster
ENSVPAG00000011331	HFM1	62	61.883	ENSMMOG00000006148	hfm1	96	62.297	Mola_mola
ENSVPAG00000011331	HFM1	70	58.754	ENSMALG00000002401	hfm1	94	64.260	Monopterus_albus
ENSVPAG00000011331	HFM1	88	72.072	MGP_CAROLIEiJ_G0027496	Hfm1	93	72.072	Mus_caroli
ENSVPAG00000011331	HFM1	93	76.627	ENSMUSG00000043410	Hfm1	93	76.627	Mus_musculus
ENSVPAG00000011331	HFM1	93	76.157	MGP_PahariEiJ_G0017268	Hfm1	93	76.157	Mus_pahari
ENSVPAG00000011331	HFM1	93	76.235	MGP_SPRETEiJ_G0028495	Hfm1	93	76.235	Mus_spretus
ENSVPAG00000011331	HFM1	93	82.438	ENSMPUG00000004594	HFM1	93	82.438	Mustela_putorius_furo
ENSVPAG00000011331	HFM1	93	83.868	ENSMLUG00000010200	HFM1	93	83.868	Myotis_lucifugus
ENSVPAG00000011331	HFM1	70	55.382	ENSNBRG00000002910	hfm1	97	62.788	Neolamprologus_brichardi
ENSVPAG00000011331	HFM1	93	79.531	ENSNLEG00000010285	HFM1	93	79.531	Nomascus_leucogenys
ENSVPAG00000011331	HFM1	76	69.297	ENSMEUG00000015788	HFM1	77	69.297	Notamacropus_eugenii
ENSVPAG00000011331	HFM1	84	74.457	ENSOPRG00000013916	HFM1	84	74.457	Ochotona_princeps
ENSVPAG00000011331	HFM1	71	59.363	ENSONIG00000010590	hfm1	99	59.351	Oreochromis_niloticus
ENSVPAG00000011331	HFM1	57	62.362	ENSORLG00000026844	hfm1	99	62.362	Oryzias_latipes
ENSVPAG00000011331	HFM1	67	53.893	ENSORLG00020002951	hfm1	77	53.893	Oryzias_latipes_hni
ENSVPAG00000011331	HFM1	72	56.325	ENSOMEG00000016474	hfm1	75	56.325	Oryzias_melastigma
ENSVPAG00000011331	HFM1	78	85.244	ENSOGAG00000032369	HFM1	92	85.244	Otolemur_garnettii
ENSVPAG00000011331	HFM1	93	86.745	ENSOARG00000015812	HFM1	93	86.745	Ovis_aries
ENSVPAG00000011331	HFM1	85	85.456	ENSPPAG00000024582	HFM1	92	85.456	Pan_paniscus
ENSVPAG00000011331	HFM1	93	85.972	ENSPPRG00000003270	HFM1	93	85.972	Panthera_pardus
ENSVPAG00000011331	HFM1	93	85.815	ENSPTIG00000018881	HFM1	93	85.815	Panthera_tigris_altaica
ENSVPAG00000011331	HFM1	93	84.392	ENSPTRG00000000948	HFM1	93	84.392	Pan_troglodytes
ENSVPAG00000011331	HFM1	93	83.216	ENSPANG00000009838	HFM1	93	83.216	Papio_anubis
ENSVPAG00000011331	HFM1	63	65.006	ENSPKIG00000003810	hfm1	95	65.580	Paramormyrops_kingsleyae
ENSVPAG00000011331	HFM1	57	62.999	ENSPMGG00000011059	hfm1	100	62.999	Periophthalmus_magnuspinnatus
ENSVPAG00000011331	HFM1	93	79.059	ENSPEMG00000022852	Hfm1	93	79.059	Peromyscus_maniculatus_bairdii
ENSVPAG00000011331	HFM1	91	68.119	ENSPCIG00000014233	HFM1	92	68.119	Phascolarctos_cinereus
ENSVPAG00000011331	HFM1	71	60.019	ENSPFOG00000017194	hfm1	100	60.019	Poecilia_formosa
ENSVPAG00000011331	HFM1	71	61.688	ENSPLAG00000000571	hfm1	92	61.688	Poecilia_latipinna
ENSVPAG00000011331	HFM1	71	61.486	ENSPMEG00000019475	hfm1	93	61.486	Poecilia_mexicana
ENSVPAG00000011331	HFM1	71	61.155	ENSPREG00000007803	hfm1	92	64.720	Poecilia_reticulata
ENSVPAG00000011331	HFM1	93	84.157	ENSPPYG00000001163	HFM1	93	84.157	Pongo_abelii
ENSVPAG00000011331	HFM1	70	78.475	ENSPCAG00000004289	-	70	78.475	Procavia_capensis
ENSVPAG00000011331	HFM1	90	81.967	ENSPVAG00000009713	HFM1	90	81.967	Pteropus_vampyrus
ENSVPAG00000011331	HFM1	65	61.093	ENSPNYG00000001795	hfm1	96	62.590	Pundamilia_nyererei
ENSVPAG00000011331	HFM1	59	65.721	ENSPNAG00000010865	hfm1	84	65.721	Pygocentrus_nattereri
ENSVPAG00000011331	HFM1	93	75.608	ENSRNOG00000023299	Hfm1	93	75.608	Rattus_norvegicus
ENSVPAG00000011331	HFM1	93	83.373	ENSRROG00000045569	HFM1	93	83.373	Rhinopithecus_roxellana
ENSVPAG00000011331	HFM1	93	80.471	ENSSBOG00000027456	HFM1	93	80.471	Saimiri_boliviensis_boliviensis
ENSVPAG00000011331	HFM1	52	77.461	ENSSHAG00000014616	-	86	77.461	Sarcophilus_harrisii
ENSVPAG00000011331	HFM1	71	61.465	ENSSFOG00015020129	hfm1	81	61.465	Scleropages_formosus
ENSVPAG00000011331	HFM1	62	62.500	ENSSMAG00000006907	hfm1	87	62.458	Scophthalmus_maximus
ENSVPAG00000011331	HFM1	57	63.845	ENSSDUG00000011424	hfm1	93	63.845	Seriola_dumerili
ENSVPAG00000011331	HFM1	58	63.976	ENSSLDG00000016386	hfm1	92	63.976	Seriola_lalandi_dorsalis
ENSVPAG00000011331	HFM1	69	57.013	ENSSPAG00000001023	hfm1	94	64.508	Stegastes_partitus
ENSVPAG00000011331	HFM1	93	85.246	ENSSSCG00000006912	HFM1	93	85.246	Sus_scrofa
ENSVPAG00000011331	HFM1	66	73.981	ENSTGUG00000006172	HFM1	100	73.981	Taeniopygia_guttata
ENSVPAG00000011331	HFM1	93	85.246	ENSTTRG00000013933	HFM1	93	85.246	Tursiops_truncatus
ENSVPAG00000011331	HFM1	71	81.492	ENSVVUG00000020760	HFM1	99	81.492	Vulpes_vulpes
ENSVPAG00000011331	HFM1	59	63.938	ENSXMAG00000004178	hfm1	93	63.938	Xiphophorus_maculatus