EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000011486 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 42347 bases
Position: chrGeneScaffold_2478:155250-197596
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000010694	PRP4	PF08799.11	4e-14	1	1
ENSVPAP00000010694	Prp18	PF02840.15	1.6e-41	1	2
ENSVPAP00000010694	Prp18	PF02840.15	1.6e-41	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000011486	-	972	-	ENSVPAP00000010694	323 (aa)	-	UPI00018BE15C

Gene Model

Click here to download ENSVPAG00000011486's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000011486's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000011486	-	100	93.860	ENSG00000165630	PRPF18	99	95.758	Homo_sapiens
ENSVPAG00000011486	-	100	79.532	ENSAPOG00000024177	prpf18	100	79.532	Acanthochromis_polyacanthus
ENSVPAG00000011486	-	100	93.860	ENSAMEG00000013591	-	100	93.860	Ailuropoda_melanoleuca
ENSVPAG00000011486	-	100	78.947	ENSACIG00000001186	prpf18	100	78.947	Amphilophus_citrinellus
ENSVPAG00000011486	-	98	79.403	ENSAOCG00000006572	prpf18	94	76.901	Amphiprion_ocellaris
ENSVPAG00000011486	-	100	79.825	ENSAPEG00000004564	prpf18	100	79.825	Amphiprion_percula
ENSVPAG00000011486	-	100	78.655	ENSATEG00000000303	prpf18	100	78.655	Anabas_testudineus
ENSVPAG00000011486	-	99	85.294	ENSAPLG00000003387	-	99	85.294	Anas_platyrhynchos
ENSVPAG00000011486	-	100	85.756	ENSACAG00000000818	-	100	85.756	Anolis_carolinensis
ENSVPAG00000011486	-	100	93.275	ENSANAG00000037445	-	100	93.275	Aotus_nancymaae
ENSVPAG00000011486	-	100	78.947	ENSACLG00000026296	prpf18	100	78.947	Astatotilapia_calliptera
ENSVPAG00000011486	-	100	78.286	ENSAMXG00000012848	prpf18	100	78.286	Astyanax_mexicanus
ENSVPAG00000011486	-	100	93.567	ENSBTAG00000017244	PRPF18	100	93.567	Bos_taurus
ENSVPAG00000011486	-	98	35.057	WBGene00009320	F32B6.3	97	35.057	Caenorhabditis_elegans
ENSVPAG00000011486	-	100	93.275	ENSCJAG00000009432	-	100	93.275	Callithrix_jacchus
ENSVPAG00000011486	-	100	93.860	ENSCAFG00000004735	-	100	93.860	Canis_familiaris
ENSVPAG00000011486	-	100	93.860	ENSCAFG00020007712	-	100	93.860	Canis_lupus_dingo
ENSVPAG00000011486	-	100	93.567	ENSCHIG00000000499	-	100	93.567	Capra_hircus
ENSVPAG00000011486	-	100	92.982	ENSTSYG00000003517	-	100	92.982	Carlito_syrichta
ENSVPAG00000011486	-	100	93.860	ENSCPOG00000021069	-	100	93.860	Cavia_porcellus
ENSVPAG00000011486	-	100	93.275	ENSCCAG00000036822	-	100	93.275	Cebus_capucinus
ENSVPAG00000011486	-	100	82.749	ENSCATG00000016633	-	100	82.749	Cercocebus_atys
ENSVPAG00000011486	-	100	92.982	ENSCLAG00000011770	-	100	92.982	Chinchilla_lanigera
ENSVPAG00000011486	-	100	91.453	ENSCSAG00000013109	-	100	91.453	Chlorocebus_sabaeus
ENSVPAG00000011486	-	100	83.427	ENSCPBG00000003100	-	100	83.427	Chrysemys_picta_bellii
ENSVPAG00000011486	-	99	50.294	ENSCING00000020481	-	97	50.294	Ciona_intestinalis
ENSVPAG00000011486	-	99	50.435	ENSCSAVG00000010546	-	99	50.437	Ciona_savignyi
ENSVPAG00000011486	-	100	93.567	ENSCANG00000034900	-	100	93.567	Colobus_angolensis_palliatus
ENSVPAG00000011486	-	100	93.275	ENSCGRG00001023665	Prpf18	100	93.275	Cricetulus_griseus_chok1gshd
ENSVPAG00000011486	-	100	93.275	ENSCGRG00000014690	Prpf18	100	93.275	Cricetulus_griseus_crigri
ENSVPAG00000011486	-	100	76.901	ENSCSEG00000005536	prpf18	99	76.901	Cynoglossus_semilaevis
ENSVPAG00000011486	-	100	78.363	ENSCVAG00000012401	prpf18	100	78.363	Cyprinodon_variegatus
ENSVPAG00000011486	-	100	78.947	ENSDARG00000058306	prpf18	100	78.947	Danio_rerio
ENSVPAG00000011486	-	100	92.690	ENSDNOG00000035607	-	100	92.690	Dasypus_novemcinctus
ENSVPAG00000011486	-	100	92.982	ENSDORG00000000858	Prpf18	100	92.982	Dipodomys_ordii
ENSVPAG00000011486	-	99	46.608	FBgn0027784	Prp18	98	46.313	Drosophila_melanogaster
ENSVPAG00000011486	-	100	81.871	ENSETEG00000015060	-	100	81.871	Echinops_telfairi
ENSVPAG00000011486	-	100	61.960	ENSEBUG00000016502	prpf18	99	61.095	Eptatretus_burgeri
ENSVPAG00000011486	-	100	94.152	ENSEASG00005019373	-	100	94.152	Equus_asinus_asinus
ENSVPAG00000011486	-	100	94.152	ENSECAG00000006997	PRPF18	100	94.152	Equus_caballus
ENSVPAG00000011486	-	72	94.444	ENSEEUG00000001171	-	74	94.444	Erinaceus_europaeus
ENSVPAG00000011486	-	100	76.385	ENSELUG00000022190	prpf18	100	76.385	Esox_lucius
ENSVPAG00000011486	-	100	93.567	ENSFCAG00000004436	-	100	93.567	Felis_catus
ENSVPAG00000011486	-	92	81.957	ENSFALG00000001912	-	97	82.769	Ficedula_albicollis
ENSVPAG00000011486	-	99	59.420	ENSFDAG00000010713	-	97	59.420	Fukomys_damarensis
ENSVPAG00000011486	-	93	92.812	ENSFDAG00000014026	-	100	92.812	Fukomys_damarensis
ENSVPAG00000011486	-	79	82.051	ENSFHEG00000020125	prpf18	98	82.022	Fundulus_heteroclitus
ENSVPAG00000011486	-	99	73.900	ENSGMOG00000012210	prpf18	99	73.900	Gadus_morhua
ENSVPAG00000011486	-	100	86.257	ENSGALG00000043593	-	100	86.257	Gallus_gallus
ENSVPAG00000011486	-	100	77.193	ENSGAFG00000006034	prpf18	100	77.193	Gambusia_affinis
ENSVPAG00000011486	-	100	75.731	ENSGACG00000012232	prpf18	100	75.731	Gasterosteus_aculeatus
ENSVPAG00000011486	-	100	86.550	ENSGAGG00000016878	-	100	86.550	Gopherus_agassizii
ENSVPAG00000011486	-	92	93.354	ENSGGOG00000025188	-	96	93.354	Gorilla_gorilla
ENSVPAG00000011486	-	100	78.947	ENSHBUG00000010264	prpf18	100	78.947	Haplochromis_burtoni
ENSVPAG00000011486	-	100	93.275	ENSHGLG00000018534	PRPF18	100	93.275	Heterocephalus_glaber_female
ENSVPAG00000011486	-	93	93.125	ENSHGLG00100012161	-	98	93.125	Heterocephalus_glaber_male
ENSVPAG00000011486	-	100	78.363	ENSHCOG00000015987	prpf18	100	78.363	Hippocampus_comes
ENSVPAG00000011486	-	100	75.921	ENSIPUG00000007432	prpf18	100	76.771	Ictalurus_punctatus
ENSVPAG00000011486	-	100	92.105	ENSSTOG00000008735	-	100	92.105	Ictidomys_tridecemlineatus
ENSVPAG00000011486	-	100	68.358	ENSJJAG00000015191	-	100	68.358	Jaculus_jaculus
ENSVPAG00000011486	-	100	93.860	ENSJJAG00000024041	-	100	93.860	Jaculus_jaculus
ENSVPAG00000011486	-	100	77.193	ENSKMAG00000012124	prpf18	100	77.193	Kryptolebias_marmoratus
ENSVPAG00000011486	-	99	77.515	ENSLBEG00000028466	prpf18	99	77.515	Labrus_bergylta
ENSVPAG00000011486	-	100	80.702	ENSLACG00000009885	prpf18	100	80.702	Latimeria_chalumnae
ENSVPAG00000011486	-	100	84.503	ENSLOCG00000016736	prpf18	100	84.503	Lepisosteus_oculatus
ENSVPAG00000011486	-	100	93.860	ENSLAFG00000007753	-	100	93.860	Loxodonta_africana
ENSVPAG00000011486	-	100	93.860	ENSMFAG00000000540	-	100	93.860	Macaca_fascicularis
ENSVPAG00000011486	-	100	93.860	ENSMMUG00000015071	PRPF18	100	93.860	Macaca_mulatta
ENSVPAG00000011486	-	100	93.860	ENSMNEG00000024679	-	100	93.860	Macaca_nemestrina
ENSVPAG00000011486	-	100	88.580	ENSMLEG00000031715	-	100	88.580	Mandrillus_leucophaeus
ENSVPAG00000011486	-	100	77.485	ENSMAMG00000006610	prpf18	100	77.485	Mastacembelus_armatus
ENSVPAG00000011486	-	100	78.947	ENSMZEG00005019392	prpf18	100	78.947	Maylandia_zebra
ENSVPAG00000011486	-	100	86.257	ENSMGAG00000005023	-	100	86.257	Meleagris_gallopavo
ENSVPAG00000011486	-	100	93.567	ENSMICG00000006572	-	100	93.567	Microcebus_murinus
ENSVPAG00000011486	-	100	93.860	ENSMOCG00000021468	Prpf18	100	93.860	Microtus_ochrogaster
ENSVPAG00000011486	-	100	77.193	ENSMMOG00000013012	prpf18	100	77.193	Mola_mola
ENSVPAG00000011486	-	100	80.117	ENSMODG00000024043	-	100	80.117	Monodelphis_domestica
ENSVPAG00000011486	-	96	84.911	ENSMODG00000016902	-	92	84.911	Monodelphis_domestica
ENSVPAG00000011486	-	100	72.571	ENSMALG00000005486	prpf18	100	72.857	Monopterus_albus
ENSVPAG00000011486	-	100	93.275	MGP_CAROLIEiJ_G0023143	Prpf18	100	98.630	Mus_caroli
ENSVPAG00000011486	-	100	92.982	ENSMUSG00000039449	Prpf18	100	98.630	Mus_musculus
ENSVPAG00000011486	-	100	93.567	MGP_PahariEiJ_G0019203	Prpf18	100	98.630	Mus_pahari
ENSVPAG00000011486	-	100	92.690	MGP_SPRETEiJ_G0024061	Prpf18	100	98.630	Mus_spretus
ENSVPAG00000011486	-	100	93.567	ENSMPUG00000000938	-	100	93.567	Mustela_putorius_furo
ENSVPAG00000011486	-	100	93.567	ENSMLUG00000009200	-	100	93.567	Myotis_lucifugus
ENSVPAG00000011486	-	100	93.275	ENSNGAG00000012500	-	100	93.275	Nannospalax_galili
ENSVPAG00000011486	-	65	82.609	ENSNGAG00000023550	-	82	83.478	Nannospalax_galili
ENSVPAG00000011486	-	100	78.947	ENSNBRG00000001778	prpf18	100	78.947	Neolamprologus_brichardi
ENSVPAG00000011486	-	100	93.860	ENSNLEG00000012186	-	100	93.860	Nomascus_leucogenys
ENSVPAG00000011486	-	74	73.643	ENSMEUG00000005032	-	75	73.643	Notamacropus_eugenii
ENSVPAG00000011486	-	82	80.000	ENSOPRG00000002153	-	100	80.000	Ochotona_princeps
ENSVPAG00000011486	-	100	92.982	ENSODEG00000003770	-	100	92.982	Octodon_degus
ENSVPAG00000011486	-	98	78.209	ENSONIG00000014854	prpf18	96	78.209	Oreochromis_niloticus
ENSVPAG00000011486	-	100	88.596	ENSOANG00000015404	-	100	88.596	Ornithorhynchus_anatinus
ENSVPAG00000011486	-	100	93.567	ENSOCUG00000027756	-	100	89.474	Oryctolagus_cuniculus
ENSVPAG00000011486	-	100	76.571	ENSORLG00000010293	prpf18	100	76.571	Oryzias_latipes
ENSVPAG00000011486	-	100	78.655	ENSORLG00020001530	prpf18	100	78.655	Oryzias_latipes_hni
ENSVPAG00000011486	-	100	78.363	ENSORLG00015013705	prpf18	100	78.363	Oryzias_latipes_hsok
ENSVPAG00000011486	-	100	79.825	ENSOMEG00000009167	prpf18	100	79.825	Oryzias_melastigma
ENSVPAG00000011486	-	100	92.690	ENSOGAG00000007294	-	100	92.690	Otolemur_garnettii
ENSVPAG00000011486	-	100	91.168	ENSOARG00000006243	-	100	91.168	Ovis_aries
ENSVPAG00000011486	-	100	93.860	ENSPPAG00000041959	-	100	93.860	Pan_paniscus
ENSVPAG00000011486	-	100	93.567	ENSPPRG00000000107	-	100	93.567	Panthera_pardus
ENSVPAG00000011486	-	100	93.275	ENSPTIG00000021094	-	100	93.275	Panthera_tigris_altaica
ENSVPAG00000011486	-	100	93.860	ENSPTRG00000002306	PRPF18	100	93.860	Pan_troglodytes
ENSVPAG00000011486	-	100	93.567	ENSPANG00000023346	-	100	93.567	Papio_anubis
ENSVPAG00000011486	-	85	94.444	ENSPKIG00000014128	prpf18	96	76.353	Paramormyrops_kingsleyae
ENSVPAG00000011486	-	100	86.842	ENSPSIG00000016064	-	100	86.842	Pelodiscus_sinensis
ENSVPAG00000011486	-	100	72.727	ENSPMGG00000016486	prpf18	100	72.727	Periophthalmus_magnuspinnatus
ENSVPAG00000011486	-	100	93.567	ENSPEMG00000013704	Prpf18	100	93.567	Peromyscus_maniculatus_bairdii
ENSVPAG00000011486	-	100	69.364	ENSPMAG00000000204	prpf18	100	69.364	Petromyzon_marinus
ENSVPAG00000011486	-	92	90.190	ENSPCIG00000012963	-	99	90.190	Phascolarctos_cinereus
ENSVPAG00000011486	-	100	76.000	ENSPFOG00000017611	prpf18	100	76.000	Poecilia_formosa
ENSVPAG00000011486	-	100	77.485	ENSPLAG00000000369	prpf18	100	77.485	Poecilia_latipinna
ENSVPAG00000011486	-	100	77.485	ENSPMEG00000005183	prpf18	100	77.485	Poecilia_mexicana
ENSVPAG00000011486	-	100	76.901	ENSPREG00000015232	prpf18	100	76.901	Poecilia_reticulata
ENSVPAG00000011486	-	100	93.567	ENSPPYG00000002101	PRPF18	100	93.567	Pongo_abelii
ENSVPAG00000011486	-	100	80.117	ENSPCAG00000010833	-	100	80.117	Procavia_capensis
ENSVPAG00000011486	-	100	86.550	ENSPCOG00000013057	-	100	86.550	Propithecus_coquereli
ENSVPAG00000011486	-	100	56.891	ENSPVAG00000002947	-	100	56.891	Pteropus_vampyrus
ENSVPAG00000011486	-	100	78.947	ENSPNYG00000003554	prpf18	100	78.947	Pundamilia_nyererei
ENSVPAG00000011486	-	100	79.487	ENSPNAG00000023151	prpf18	100	79.487	Pygocentrus_nattereri
ENSVPAG00000011486	-	100	92.690	ENSRNOG00000018396	Prpf18	100	92.690	Rattus_norvegicus
ENSVPAG00000011486	-	100	93.275	ENSRBIG00000028028	-	100	93.275	Rhinopithecus_bieti
ENSVPAG00000011486	-	100	93.567	ENSRROG00000040695	-	100	93.567	Rhinopithecus_roxellana
ENSVPAG00000011486	-	100	93.275	ENSSBOG00000034482	-	100	93.275	Saimiri_boliviensis_boliviensis
ENSVPAG00000011486	-	100	90.643	ENSSHAG00000016463	-	100	90.643	Sarcophilus_harrisii
ENSVPAG00000011486	-	100	71.930	ENSSHAG00000009669	-	100	71.930	Sarcophilus_harrisii
ENSVPAG00000011486	-	66	42.672	ENSSFOG00015021154	-	89	42.672	Scleropages_formosus
ENSVPAG00000011486	-	98	76.232	ENSSFOG00015022118	prpf18	100	71.676	Scleropages_formosus
ENSVPAG00000011486	-	100	77.193	ENSSMAG00000005308	prpf18	100	77.193	Scophthalmus_maximus
ENSVPAG00000011486	-	100	79.240	ENSSDUG00000015428	prpf18	100	79.240	Seriola_dumerili
ENSVPAG00000011486	-	100	79.240	ENSSLDG00000023989	prpf18	100	79.240	Seriola_lalandi_dorsalis
ENSVPAG00000011486	-	100	68.713	ENSSARG00000005307	-	100	68.713	Sorex_araneus
ENSVPAG00000011486	-	100	86.550	ENSSPUG00000002619	-	100	86.550	Sphenodon_punctatus
ENSVPAG00000011486	-	100	78.655	ENSSPAG00000019502	prpf18	100	78.655	Stegastes_partitus
ENSVPAG00000011486	-	100	93.860	ENSSSCG00000026354	-	100	93.860	Sus_scrofa
ENSVPAG00000011486	-	100	86.257	ENSTGUG00000002286	-	100	86.257	Taeniopygia_guttata
ENSVPAG00000011486	-	100	76.316	ENSTRUG00000011278	prpf18	100	76.316	Takifugu_rubripes
ENSVPAG00000011486	-	100	76.023	ENSTNIG00000000911	prpf18	100	76.023	Tetraodon_nigroviridis
ENSVPAG00000011486	-	79	96.774	ENSTBEG00000013011	-	75	96.774	Tupaia_belangeri
ENSVPAG00000011486	-	100	93.567	ENSTTRG00000011117	PRPF18	100	93.567	Tursiops_truncatus
ENSVPAG00000011486	-	95	90.462	ENSUAMG00000001815	-	94	90.462	Ursus_americanus
ENSVPAG00000011486	-	100	88.889	ENSUMAG00000012329	-	100	88.889	Ursus_maritimus
ENSVPAG00000011486	-	100	93.860	ENSVVUG00000005453	-	100	93.860	Vulpes_vulpes
ENSVPAG00000011486	-	100	75.072	ENSXETG00000024057	prpf18	100	75.072	Xenopus_tropicalis
ENSVPAG00000011486	-	100	76.744	ENSXCOG00000020414	prpf18	100	76.744	Xiphophorus_couchianus
ENSVPAG00000011486	-	100	77.193	ENSXMAG00000004713	prpf18	91	77.193	Xiphophorus_maculatus