EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVPAG00000011867 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 1580 bases
Position: chrscaffold_3382:36949-38528
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000011043	zf-C2H2	PF00096.26	1.9e-64	1	11
ENSVPAP00000011043	zf-C2H2	PF00096.26	1.9e-64	2	11
ENSVPAP00000011043	zf-C2H2	PF00096.26	1.9e-64	3	11
ENSVPAP00000011043	zf-C2H2	PF00096.26	1.9e-64	4	11
ENSVPAP00000011043	zf-C2H2	PF00096.26	1.9e-64	5	11
ENSVPAP00000011043	zf-C2H2	PF00096.26	1.9e-64	6	11
ENSVPAP00000011043	zf-C2H2	PF00096.26	1.9e-64	7	11
ENSVPAP00000011043	zf-C2H2	PF00096.26	1.9e-64	8	11
ENSVPAP00000011043	zf-C2H2	PF00096.26	1.9e-64	9	11
ENSVPAP00000011043	zf-C2H2	PF00096.26	1.9e-64	10	11
ENSVPAP00000011043	zf-C2H2	PF00096.26	1.9e-64	11	11
ENSVPAP00000011043	zf-met	PF12874.7	7.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000011867	-	1476	-	ENSVPAP00000011043	492 (aa)	-	UPI00018BCAB0

Gene Model

Click here to download ENSVPAG00000011867's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000011867's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVPAG00000011867	-	98	58.058	ENSVPAG00000011869	ZNF345	98	58.058
ENSVPAG00000011867	-	76	48.529	ENSVPAG00000002606	-	57	48.529
ENSVPAG00000011867	-	85	49.184	ENSVPAG00000009652	-	84	49.184
ENSVPAG00000011867	-	85	34.874	ENSVPAG00000004995	GTF3A	80	34.711
ENSVPAG00000011867	-	94	43.421	ENSVPAG00000006418	ZNF596	84	43.421
ENSVPAG00000011867	-	90	46.632	ENSVPAG00000000904	ZNF132	95	46.632
ENSVPAG00000011867	-	89	54.613	ENSVPAG00000010456	ZNF768	56	54.815
ENSVPAG00000011867	-	87	33.721	ENSVPAG00000007435	PRDM5	74	33.721
ENSVPAG00000011867	-	87	57.196	ENSVPAG00000003027	ZFP69B	80	57.196
ENSVPAG00000011867	-	89	55.410	ENSVPAG00000002698	-	99	55.410
ENSVPAG00000011867	-	89	54.054	ENSVPAG00000000139	ZNF235	58	54.054
ENSVPAG00000011867	-	89	45.000	ENSVPAG00000007465	ZNF233	62	42.929
ENSVPAG00000011867	-	81	44.554	ENSVPAG00000007788	WT1	51	44.554
ENSVPAG00000011867	-	92	50.554	ENSVPAG00000012526	ZFP1	93	50.554

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000011867	-	88	53.774	ENSAMXG00000043019	-	92	53.774	Astyanax_mexicanus
ENSVPAG00000011867	-	90	45.614	ENSAMXG00000034096	-	87	45.614	Astyanax_mexicanus
ENSVPAG00000011867	-	89	52.349	ENSAMXG00000044028	-	96	52.349	Astyanax_mexicanus
ENSVPAG00000011867	-	94	57.519	ENSAMXG00000029783	-	98	56.537	Astyanax_mexicanus
ENSVPAG00000011867	-	89	57.927	ENSAMXG00000000353	-	94	57.927	Astyanax_mexicanus
ENSVPAG00000011867	-	89	56.071	ENSBTAG00000040358	-	100	56.071	Bos_taurus
ENSVPAG00000011867	-	90	47.255	ENSBTAG00000014593	-	85	47.255	Bos_taurus
ENSVPAG00000011867	-	89	52.676	ENSCSAG00000000471	-	99	52.676	Chlorocebus_sabaeus
ENSVPAG00000011867	-	95	57.538	ENSCPBG00000002430	-	84	56.908	Chrysemys_picta_bellii
ENSVPAG00000011867	-	96	51.852	ENSCPBG00000009609	-	96	51.852	Chrysemys_picta_bellii
ENSVPAG00000011867	-	83	37.069	ENSDNOG00000047529	-	69	39.255	Dasypus_novemcinctus
ENSVPAG00000011867	-	90	53.571	ENSDNOG00000042588	-	86	53.571	Dasypus_novemcinctus
ENSVPAG00000011867	-	89	49.004	ENSEBUG00000013221	-	95	49.004	Eptatretus_burgeri
ENSVPAG00000011867	-	91	46.111	ENSEBUG00000016164	-	82	46.111	Eptatretus_burgeri
ENSVPAG00000011867	-	90	45.247	ENSEBUG00000016969	-	74	45.247	Eptatretus_burgeri
ENSVPAG00000011867	-	86	46.218	ENSELUG00000019008	-	87	42.216	Esox_lucius
ENSVPAG00000011867	-	89	57.544	ENSFCAG00000043966	-	99	57.544	Felis_catus
ENSVPAG00000011867	-	89	49.505	ENSGAFG00000021131	-	80	49.505	Gambusia_affinis
ENSVPAG00000011867	-	86	45.018	ENSGAFG00000013048	-	72	45.018	Gambusia_affinis
ENSVPAG00000011867	-	89	53.782	ENSGGOG00000042802	-	99	53.782	Gorilla_gorilla
ENSVPAG00000011867	-	89	44.000	ENSHCOG00000019512	-	95	43.085	Hippocampus_comes
ENSVPAG00000011867	-	90	46.108	ENSHCOG00000014713	-	97	44.681	Hippocampus_comes
ENSVPAG00000011867	-	89	53.782	ENSMFAG00000008648	-	99	53.782	Macaca_fascicularis
ENSVPAG00000011867	-	89	53.782	ENSMNEG00000001556	-	99	53.782	Macaca_nemestrina
ENSVPAG00000011867	-	89	52.958	ENSMLEG00000007035	-	99	52.958	Mandrillus_leucophaeus
ENSVPAG00000011867	-	89	45.038	ENSMAUG00000015263	-	71	46.486	Mesocricetus_auratus
ENSVPAG00000011867	-	89	45.287	ENSMOCG00000003394	-	70	46.073	Microtus_ochrogaster
ENSVPAG00000011867	-	89	46.216	ENSMODG00000028916	-	65	46.216	Monodelphis_domestica
ENSVPAG00000011867	-	89	53.094	ENSMPUG00000006562	-	67	53.094	Mustela_putorius_furo
ENSVPAG00000011867	-	84	53.333	ENSNBRG00000010194	-	89	53.061	Neolamprologus_brichardi
ENSVPAG00000011867	-	89	53.501	ENSNLEG00000018988	-	99	53.501	Nomascus_leucogenys
ENSVPAG00000011867	-	89	46.606	ENSMEUG00000006978	-	98	46.606	Notamacropus_eugenii
ENSVPAG00000011867	-	99	50.000	ENSMEUG00000012153	-	81	52.195	Notamacropus_eugenii
ENSVPAG00000011867	-	89	42.520	ENSOGAG00000024538	-	59	42.520	Otolemur_garnettii
ENSVPAG00000011867	-	89	53.782	ENSPPAG00000014496	-	99	53.782	Pan_paniscus
ENSVPAG00000011867	-	89	53.239	ENSPANG00000030207	-	99	53.239	Papio_anubis
ENSVPAG00000011867	-	92	54.737	ENSPSIG00000009650	-	85	54.737	Pelodiscus_sinensis
ENSVPAG00000011867	-	93	55.858	ENSPSIG00000010405	-	99	55.858	Pelodiscus_sinensis
ENSVPAG00000011867	-	91	46.883	ENSPEMG00000010242	-	70	48.168	Peromyscus_maniculatus_bairdii
ENSVPAG00000011867	-	89	47.480	ENSPLAG00000021062	-	88	47.480	Poecilia_latipinna
ENSVPAG00000011867	-	92	47.449	ENSPLAG00000010389	-	93	47.449	Poecilia_latipinna
ENSVPAG00000011867	-	85	43.599	ENSPLAG00000020710	-	76	43.599	Poecilia_latipinna
ENSVPAG00000011867	-	91	51.976	ENSPCAG00000009106	-	87	51.976	Procavia_capensis
ENSVPAG00000011867	-	89	42.038	ENSPNYG00000024243	-	93	42.038	Pundamilia_nyererei
ENSVPAG00000011867	-	91	52.252	ENSPNAG00000018644	-	98	52.252	Pygocentrus_nattereri
ENSVPAG00000011867	-	90	49.117	ENSSHAG00000001415	-	83	49.117	Sarcophilus_harrisii
ENSVPAG00000011867	-	90	49.014	ENSSDUG00000009534	-	68	52.915	Seriola_dumerili
ENSVPAG00000011867	-	89	52.836	ENSSLDG00000013760	-	96	53.191	Seriola_lalandi_dorsalis
ENSVPAG00000011867	-	90	49.608	ENSSPUG00000007147	-	99	49.608	Sphenodon_punctatus
ENSVPAG00000011867	-	91	50.671	ENSTRUG00000006896	-	92	50.671	Takifugu_rubripes
ENSVPAG00000011867	-	87	39.465	ENSXCOG00000009794	-	97	41.176	Xiphophorus_couchianus