EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000011912 (Gene tree)
Gene ID: -
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 27703 bases
Position: chrGeneScaffold_256:66498-94200
Accession: 12950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000011084	KH_1	PF00013.29	1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000011912	SF1-201	1623	-	ENSVPAP00000011084	540 (aa)	-	UPI00018BCADC

Gene Model

Click here to download ENSVPAG00000011912's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000011912's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000011912	SF1	66	100.000	ENSAMEG00000017828	SF1	55	100.000	Ailuropoda_melanoleuca
ENSVPAG00000011912	SF1	65	91.262	ENSANAG00000022607	-	58	90.566	Aotus_nancymaae
ENSVPAG00000011912	SF1	66	100.000	ENSANAG00000026664	-	71	100.000	Aotus_nancymaae
ENSVPAG00000011912	SF1	66	100.000	ENSBTAG00000001035	SF1	59	100.000	Bos_taurus
ENSVPAG00000011912	SF1	66	100.000	ENSCJAG00000002780	SF1	56	100.000	Callithrix_jacchus
ENSVPAG00000011912	SF1	66	100.000	ENSCAFG00000014239	SF1	56	100.000	Canis_familiaris
ENSVPAG00000011912	SF1	66	100.000	ENSCAFG00020014381	SF1	56	100.000	Canis_lupus_dingo
ENSVPAG00000011912	SF1	66	100.000	ENSCHIG00000025867	SF1	65	100.000	Capra_hircus
ENSVPAG00000011912	SF1	58	99.197	ENSTSYG00000033618	SF1	84	99.197	Carlito_syrichta
ENSVPAG00000011912	SF1	64	100.000	ENSCAPG00000010762	SF1	61	100.000	Cavia_aperea
ENSVPAG00000011912	SF1	66	100.000	ENSCPOG00000012290	SF1	66	100.000	Cavia_porcellus
ENSVPAG00000011912	SF1	66	89.623	ENSCCAG00000023781	-	71	89.558	Cebus_capucinus
ENSVPAG00000011912	SF1	66	100.000	ENSCCAG00000037881	SF1	71	100.000	Cebus_capucinus
ENSVPAG00000011912	SF1	66	100.000	ENSCATG00000011564	SF1	65	100.000	Cercocebus_atys
ENSVPAG00000011912	SF1	66	100.000	ENSCSAG00000007258	SF1	65	100.000	Chlorocebus_sabaeus
ENSVPAG00000011912	SF1	58	98.795	ENSCHOG00000006008	SF1	61	98.901	Choloepus_hoffmanni
ENSVPAG00000011912	SF1	66	100.000	ENSCANG00000042201	SF1	65	100.000	Colobus_angolensis_palliatus
ENSVPAG00000011912	SF1	66	99.598	ENSCGRG00001003677	Sf1	60	99.598	Cricetulus_griseus_chok1gshd
ENSVPAG00000011912	SF1	66	99.597	ENSCGRG00000001708	Sf1	65	99.597	Cricetulus_griseus_crigri
ENSVPAG00000011912	SF1	66	99.598	ENSDNOG00000001282	SF1	65	99.598	Dasypus_novemcinctus
ENSVPAG00000011912	SF1	66	100.000	ENSDORG00000016334	Sf1	56	100.000	Dipodomys_ordii
ENSVPAG00000011912	SF1	66	98.790	ENSETEG00000012830	SF1	50	98.790	Echinops_telfairi
ENSVPAG00000011912	SF1	66	99.598	ENSEASG00005018272	SF1	65	99.598	Equus_asinus_asinus
ENSVPAG00000011912	SF1	66	100.000	ENSECAG00000024544	SF1	65	100.000	Equus_caballus
ENSVPAG00000011912	SF1	55	100.000	ENSEEUG00000001058	SF1	75	100.000	Erinaceus_europaeus
ENSVPAG00000011912	SF1	66	100.000	ENSFCAG00000012231	SF1	56	100.000	Felis_catus
ENSVPAG00000011912	SF1	65	99.194	ENSFDAG00000009833	SF1	61	100.000	Fukomys_damarensis
ENSVPAG00000011912	SF1	66	100.000	ENSHGLG00000009541	SF1	60	100.000	Heterocephalus_glaber_female
ENSVPAG00000011912	SF1	54	95.089	ENSHGLG00100008076	-	70	95.089	Heterocephalus_glaber_male
ENSVPAG00000011912	SF1	64	100.000	ENSHGLG00100013879	-	61	100.000	Heterocephalus_glaber_male
ENSVPAG00000011912	SF1	65	87.952	ENSHGLG00100008255	-	73	87.952	Heterocephalus_glaber_male
ENSVPAG00000011912	SF1	66	87.736	ENSSTOG00000024353	-	59	84.462	Ictidomys_tridecemlineatus
ENSVPAG00000011912	SF1	66	100.000	ENSSTOG00000009790	-	56	100.000	Ictidomys_tridecemlineatus
ENSVPAG00000011912	SF1	66	100.000	ENSJJAG00000011788	Sf1	56	100.000	Jaculus_jaculus
ENSVPAG00000011912	SF1	66	100.000	ENSLAFG00000007201	SF1	56	100.000	Loxodonta_africana
ENSVPAG00000011912	SF1	66	100.000	ENSMFAG00000033122	SF1	65	100.000	Macaca_fascicularis
ENSVPAG00000011912	SF1	66	100.000	ENSMMUG00000022606	SF1	75	100.000	Macaca_mulatta
ENSVPAG00000011912	SF1	66	100.000	ENSMNEG00000037901	SF1	65	100.000	Macaca_nemestrina
ENSVPAG00000011912	SF1	66	99.602	ENSMLEG00000040706	SF1	66	100.000	Mandrillus_leucophaeus
ENSVPAG00000011912	SF1	66	99.598	ENSMAUG00000014064	Sf1	60	99.598	Mesocricetus_auratus
ENSVPAG00000011912	SF1	66	100.000	ENSMICG00000001202	SF1	71	100.000	Microcebus_murinus
ENSVPAG00000011912	SF1	66	99.598	ENSMOCG00000022038	Sf1	60	99.598	Microtus_ochrogaster
ENSVPAG00000011912	SF1	65	99.598	ENSMODG00000029407	SF1	75	99.598	Monodelphis_domestica
ENSVPAG00000011912	SF1	66	99.598	MGP_CAROLIEiJ_G0022607	Sf1	87	99.571	Mus_caroli
ENSVPAG00000011912	SF1	66	99.598	ENSMUSG00000024949	Sf1	87	99.571	Mus_musculus
ENSVPAG00000011912	SF1	66	99.598	MGP_PahariEiJ_G0014101	Sf1	87	99.571	Mus_pahari
ENSVPAG00000011912	SF1	66	99.598	MGP_SPRETEiJ_G0023518	Sf1	87	99.571	Mus_spretus
ENSVPAG00000011912	SF1	66	100.000	ENSMPUG00000012684	SF1	56	100.000	Mustela_putorius_furo
ENSVPAG00000011912	SF1	64	94.779	ENSMLUG00000029800	-	60	94.779	Myotis_lucifugus
ENSVPAG00000011912	SF1	66	100.000	ENSMLUG00000015217	-	56	100.000	Myotis_lucifugus
ENSVPAG00000011912	SF1	66	100.000	ENSNGAG00000005550	Sf1	60	100.000	Nannospalax_galili
ENSVPAG00000011912	SF1	66	100.000	ENSNLEG00000005236	-	65	100.000	Nomascus_leucogenys
ENSVPAG00000011912	SF1	64	99.587	ENSMEUG00000013424	SF1	66	99.587	Notamacropus_eugenii
ENSVPAG00000011912	SF1	58	100.000	ENSOPRG00000005008	SF1	63	100.000	Ochotona_princeps
ENSVPAG00000011912	SF1	66	99.057	ENSODEG00000006102	-	56	99.057	Octodon_degus
ENSVPAG00000011912	SF1	53	100.000	ENSOANG00000002909	SF1	70	100.000	Ornithorhynchus_anatinus
ENSVPAG00000011912	SF1	66	100.000	ENSOCUG00000026486	SF1	56	100.000	Oryctolagus_cuniculus
ENSVPAG00000011912	SF1	66	100.000	ENSOGAG00000016196	SF1	56	100.000	Otolemur_garnettii
ENSVPAG00000011912	SF1	66	100.000	ENSOARG00000009166	SF1	62	100.000	Ovis_aries
ENSVPAG00000011912	SF1	66	100.000	ENSPPAG00000002799	-	72	100.000	Pan_paniscus
ENSVPAG00000011912	SF1	66	100.000	ENSPPRG00000013566	SF1	55	100.000	Panthera_pardus
ENSVPAG00000011912	SF1	64	100.000	ENSPTIG00000016141	SF1	62	100.000	Panthera_tigris_altaica
ENSVPAG00000011912	SF1	66	100.000	ENSPTRG00000003846	SF1	74	100.000	Pan_troglodytes
ENSVPAG00000011912	SF1	66	100.000	ENSPANG00000020754	SF1	65	100.000	Papio_anubis
ENSVPAG00000011912	SF1	66	99.598	ENSPEMG00000010463	Sf1	60	99.598	Peromyscus_maniculatus_bairdii
ENSVPAG00000011912	SF1	66	99.598	ENSPCIG00000018173	SF1	56	99.598	Phascolarctos_cinereus
ENSVPAG00000011912	SF1	66	100.000	ENSPPYG00000003098	-	67	100.000	Pongo_abelii
ENSVPAG00000011912	SF1	66	99.203	ENSPCAG00000013631	SF1	53	99.203	Procavia_capensis
ENSVPAG00000011912	SF1	66	100.000	ENSPCOG00000027546	SF1	71	100.000	Propithecus_coquereli
ENSVPAG00000011912	SF1	66	99.203	ENSPVAG00000016938	SF1	54	99.203	Pteropus_vampyrus
ENSVPAG00000011912	SF1	66	99.598	ENSRNOG00000021085	Sf1	60	98.113	Rattus_norvegicus
ENSVPAG00000011912	SF1	66	100.000	ENSRBIG00000042818	SF1	65	100.000	Rhinopithecus_bieti
ENSVPAG00000011912	SF1	66	99.602	ENSRROG00000045655	SF1	70	99.598	Rhinopithecus_roxellana
ENSVPAG00000011912	SF1	66	93.396	ENSSBOG00000022267	-	75	88.333	Saimiri_boliviensis_boliviensis
ENSVPAG00000011912	SF1	65	94.758	ENSSARG00000008180	SF1	69	94.758	Sorex_araneus
ENSVPAG00000011912	SF1	61	99.571	ENSSPUG00000012907	SF1	59	99.571	Sphenodon_punctatus
ENSVPAG00000011912	SF1	66	100.000	ENSSSCG00000013021	SF1	65	100.000	Sus_scrofa
ENSVPAG00000011912	SF1	66	100.000	ENSTBEG00000013133	SF1	52	100.000	Tupaia_belangeri
ENSVPAG00000011912	SF1	65	99.048	ENSTTRG00000008857	SF1	65	99.057	Tursiops_truncatus
ENSVPAG00000011912	SF1	66	100.000	ENSUMAG00000007268	SF1	68	100.000	Ursus_maritimus
ENSVPAG00000011912	SF1	66	100.000	ENSVVUG00000028585	SF1	65	100.000	Vulpes_vulpes