EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000012043 (Gene tree)
Gene ID: -
Gene Symbol: SAFB
Alias: HET|SAFB1
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 34288 bases
Position: chrGeneScaffold_1291:85867-120154
Accession: 10520
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000011207	RRM_5	PF13893.6	3.9e-07	1	1
ENSVPAP00000011207	RRM_1	PF00076.22	1.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000012043	SAFB-201	2529	-	ENSVPAP00000011207	843 (aa)	-	UPI00018BCA37

Gene Model

Click here to download ENSVPAG00000012043's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000012043's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000012043	SAFB	79	94.531	ENSG00000160633	SAFB	73	94.531	Homo_sapiens
ENSVPAG00000012043	SAFB	79	97.692	ENSAMEG00000012254	SAFB	74	97.692	Ailuropoda_melanoleuca
ENSVPAG00000012043	SAFB	79	68.035	ENSAPLG00000005780	-	76	69.501	Anas_platyrhynchos
ENSVPAG00000012043	SAFB	63	71.560	ENSAPLG00000006355	-	79	71.560	Anas_platyrhynchos
ENSVPAG00000012043	SAFB	62	58.772	ENSACAG00000016893	-	70	54.469	Anolis_carolinensis
ENSVPAG00000012043	SAFB	79	93.077	ENSANAG00000028821	SAFB	73	93.077	Aotus_nancymaae
ENSVPAG00000012043	SAFB	78	89.489	ENSBTAG00000007875	SAFB	72	89.565	Bos_taurus
ENSVPAG00000012043	SAFB	73	90.774	ENSCJAG00000017081	SAFB	87	93.846	Callithrix_jacchus
ENSVPAG00000012043	SAFB	79	100.000	ENSCAFG00000018803	SAFB	63	100.000	Canis_familiaris
ENSVPAG00000012043	SAFB	79	100.000	ENSCAFG00020018943	SAFB	73	100.000	Canis_lupus_dingo
ENSVPAG00000012043	SAFB	78	89.489	ENSCHIG00000007262	SAFB	72	89.565	Capra_hircus
ENSVPAG00000012043	SAFB	66	90.435	ENSCAPG00000012121	SAFB	69	90.717	Cavia_aperea
ENSVPAG00000012043	SAFB	79	89.231	ENSCPOG00000026322	SAFB	69	91.304	Cavia_porcellus
ENSVPAG00000012043	SAFB	79	93.846	ENSCCAG00000020193	SAFB	73	93.846	Cebus_capucinus
ENSVPAG00000012043	SAFB	79	93.846	ENSCATG00000029994	SAFB	73	93.846	Cercocebus_atys
ENSVPAG00000012043	SAFB	79	93.077	ENSCLAG00000007734	SAFB	78	78.537	Chinchilla_lanigera
ENSVPAG00000012043	SAFB	79	93.846	ENSCSAG00000009949	SAFB	73	93.846	Chlorocebus_sabaeus
ENSVPAG00000012043	SAFB	68	97.143	ENSCHOG00000003208	SAFB	68	97.436	Choloepus_hoffmanni
ENSVPAG00000012043	SAFB	72	84.127	ENSCPBG00000010936	-	69	84.127	Chrysemys_picta_bellii
ENSVPAG00000012043	SAFB	77	67.059	ENSCPBG00000010928	-	75	67.647	Chrysemys_picta_bellii
ENSVPAG00000012043	SAFB	67	94.915	ENSCANG00000004774	-	70	94.915	Colobus_angolensis_palliatus
ENSVPAG00000012043	SAFB	79	89.844	ENSCANG00000019754	-	72	89.844	Colobus_angolensis_palliatus
ENSVPAG00000012043	SAFB	78	92.188	ENSCGRG00001002254	Safb	73	92.188	Cricetulus_griseus_chok1gshd
ENSVPAG00000012043	SAFB	75	90.769	ENSCGRG00000011529	Safb	74	90.769	Cricetulus_griseus_crigri
ENSVPAG00000012043	SAFB	79	88.988	ENSDNOG00000015746	SAFB	79	88.988	Dasypus_novemcinctus
ENSVPAG00000012043	SAFB	67	91.139	ENSDORG00000016200	Safb	67	89.231	Dipodomys_ordii
ENSVPAG00000012043	SAFB	69	86.719	ENSETEG00000018679	SAFB	68	86.719	Echinops_telfairi
ENSVPAG00000012043	SAFB	79	96.124	ENSEASG00005023019	SAFB	73	95.420	Equus_asinus_asinus
ENSVPAG00000012043	SAFB	79	96.124	ENSECAG00000018659	SAFB	65	96.899	Equus_caballus
ENSVPAG00000012043	SAFB	64	53.571	ENSELUG00000022327	safb	58	53.571	Esox_lucius
ENSVPAG00000012043	SAFB	79	96.923	ENSFCAG00000011835	SAFB	73	96.923	Felis_catus
ENSVPAG00000012043	SAFB	77	70.501	ENSFALG00000013882	-	65	69.912	Ficedula_albicollis
ENSVPAG00000012043	SAFB	57	73.043	ENSFALG00000013881	-	78	65.714	Ficedula_albicollis
ENSVPAG00000012043	SAFB	67	88.136	ENSFDAG00000020306	SAFB	66	89.873	Fukomys_damarensis
ENSVPAG00000012043	SAFB	59	50.649	ENSFHEG00000004219	safb	61	50.737	Fundulus_heteroclitus
ENSVPAG00000012043	SAFB	50	53.231	ENSGMOG00000014280	safb	52	49.847	Gadus_morhua
ENSVPAG00000012043	SAFB	79	70.206	ENSGALG00000013365	-	71	68.142	Gallus_gallus
ENSVPAG00000012043	SAFB	52	75.904	ENSGALG00000001948	-	67	75.904	Gallus_gallus
ENSVPAG00000012043	SAFB	51	47.661	ENSGAFG00000016162	safb	53	51.321	Gambusia_affinis
ENSVPAG00000012043	SAFB	55	61.988	ENSGAGG00000017702	-	68	61.652	Gopherus_agassizii
ENSVPAG00000012043	SAFB	70	80.723	ENSGAGG00000008424	-	67	80.723	Gopherus_agassizii
ENSVPAG00000012043	SAFB	79	93.077	ENSGGOG00000015109	SAFB	74	93.077	Gorilla_gorilla
ENSVPAG00000012043	SAFB	79	94.531	ENSHGLG00000015883	SAFB	72	94.531	Heterocephalus_glaber_female
ENSVPAG00000012043	SAFB	66	93.077	ENSHGLG00100004228	SAFB	67	93.077	Heterocephalus_glaber_male
ENSVPAG00000012043	SAFB	61	51.807	ENSIPUG00000024869	safb2	61	55.043	Ictalurus_punctatus
ENSVPAG00000012043	SAFB	79	97.656	ENSSTOG00000002783	SAFB	84	81.298	Ictidomys_tridecemlineatus
ENSVPAG00000012043	SAFB	78	92.308	ENSJJAG00000009021	Safb	78	78.897	Jaculus_jaculus
ENSVPAG00000012043	SAFB	62	63.673	ENSLACG00000018090	SAFB	73	60.714	Latimeria_chalumnae
ENSVPAG00000012043	SAFB	79	49.728	ENSLOCG00000003613	safb	74	54.645	Lepisosteus_oculatus
ENSVPAG00000012043	SAFB	79	92.308	ENSLAFG00000003840	SAFB	74	92.308	Loxodonta_africana
ENSVPAG00000012043	SAFB	79	93.846	ENSMFAG00000003885	SAFB	73	93.846	Macaca_fascicularis
ENSVPAG00000012043	SAFB	79	95.312	ENSMMUG00000017970	SAFB	73	95.312	Macaca_mulatta
ENSVPAG00000012043	SAFB	79	93.846	ENSMNEG00000035637	SAFB	71	95.312	Macaca_nemestrina
ENSVPAG00000012043	SAFB	77	93.846	ENSMLEG00000038637	SAFB	71	93.846	Mandrillus_leucophaeus
ENSVPAG00000012043	SAFB	63	48.851	ENSMAMG00000003357	safb	51	49.394	Mastacembelus_armatus
ENSVPAG00000012043	SAFB	77	69.027	ENSMGAG00000001101	-	73	67.847	Meleagris_gallopavo
ENSVPAG00000012043	SAFB	54	74.699	ENSMGAG00000001051	-	57	74.699	Meleagris_gallopavo
ENSVPAG00000012043	SAFB	63	77.219	ENSMICG00000046795	-	67	76.923	Microcebus_murinus
ENSVPAG00000012043	SAFB	78	92.373	ENSMICG00000008739	-	76	90.805	Microcebus_murinus
ENSVPAG00000012043	SAFB	78	90.769	ENSMOCG00000014040	Safb	72	90.769	Microtus_ochrogaster
ENSVPAG00000012043	SAFB	77	76.991	ENSMODG00000001236	SAFB	72	77.557	Monodelphis_domestica
ENSVPAG00000012043	SAFB	78	92.188	MGP_CAROLIEiJ_G0021780	Safb	71	92.188	Mus_caroli
ENSVPAG00000012043	SAFB	78	92.188	ENSMUSG00000071054	Safb	71	92.188	Mus_musculus
ENSVPAG00000012043	SAFB	78	92.188	MGP_PahariEiJ_G0020769	Safb	71	92.188	Mus_pahari
ENSVPAG00000012043	SAFB	79	97.692	ENSMPUG00000006123	SAFB	69	97.692	Mustela_putorius_furo
ENSVPAG00000012043	SAFB	79	91.369	ENSMLUG00000001081	SAFB	73	91.667	Myotis_lucifugus
ENSVPAG00000012043	SAFB	79	87.692	ENSNGAG00000019882	Safb	71	87.692	Nannospalax_galili
ENSVPAG00000012043	SAFB	76	95.050	ENSNLEG00000013551	SAFB	73	95.050	Nomascus_leucogenys
ENSVPAG00000012043	SAFB	75	88.421	ENSOPRG00000011561	-	78	88.421	Ochotona_princeps
ENSVPAG00000012043	SAFB	79	94.531	ENSODEG00000014838	SAFB	71	94.531	Octodon_degus
ENSVPAG00000012043	SAFB	83	73.864	ENSOCUG00000014628	SAFB	75	87.342	Oryctolagus_cuniculus
ENSVPAG00000012043	SAFB	79	88.201	ENSOGAG00000027769	SAFB	73	85.385	Otolemur_garnettii
ENSVPAG00000012043	SAFB	64	78.869	ENSOARG00000007856	-	69	83.824	Ovis_aries
ENSVPAG00000012043	SAFB	75	88.983	ENSOARG00000007662	-	65	89.565	Ovis_aries
ENSVPAG00000012043	SAFB	79	93.077	ENSPPAG00000035129	SAFB	73	93.077	Pan_paniscus
ENSVPAG00000012043	SAFB	79	96.923	ENSPPRG00000017197	SAFB	73	96.923	Panthera_pardus
ENSVPAG00000012043	SAFB	79	93.077	ENSPTRG00000010335	SAFB	73	93.077	Pan_troglodytes
ENSVPAG00000012043	SAFB	79	93.846	ENSPANG00000007770	SAFB	73	93.846	Papio_anubis
ENSVPAG00000012043	SAFB	79	63.989	ENSPSIG00000009367	-	72	63.303	Pelodiscus_sinensis
ENSVPAG00000012043	SAFB	79	64.804	ENSPSIG00000011679	-	76	66.972	Pelodiscus_sinensis
ENSVPAG00000012043	SAFB	78	90.769	ENSPEMG00000020428	Safb	72	90.769	Peromyscus_maniculatus_bairdii
ENSVPAG00000012043	SAFB	62	70.321	ENSPCIG00000009504	-	99	70.161	Phascolarctos_cinereus
ENSVPAG00000012043	SAFB	61	46.765	ENSPFOG00000007745	safb	51	50.570	Poecilia_formosa
ENSVPAG00000012043	SAFB	61	46.765	ENSPMEG00000021023	safb	51	50.570	Poecilia_mexicana
ENSVPAG00000012043	SAFB	79	95.312	ENSPPYG00000009428	SAFB	73	95.312	Pongo_abelii
ENSVPAG00000012043	SAFB	79	89.844	ENSPCAG00000006475	SAFB	73	89.844	Procavia_capensis
ENSVPAG00000012043	SAFB	78	92.373	ENSPCOG00000014090	SAFB	66	93.043	Propithecus_coquereli
ENSVPAG00000012043	SAFB	75	96.591	ENSPVAG00000004913	SAFB	69	96.591	Pteropus_vampyrus
ENSVPAG00000012043	SAFB	63	53.012	ENSPNAG00000021838	safb	58	55.758	Pygocentrus_nattereri
ENSVPAG00000012043	SAFB	78	92.562	ENSRNOG00000050543	Safb	75	92.920	Rattus_norvegicus
ENSVPAG00000012043	SAFB	76	90.774	ENSRBIG00000042509	SAFB	73	90.774	Rhinopithecus_bieti
ENSVPAG00000012043	SAFB	79	93.077	ENSRROG00000029278	SAFB	73	93.077	Rhinopithecus_roxellana
ENSVPAG00000012043	SAFB	79	93.846	ENSSBOG00000026291	SAFB	73	93.846	Saimiri_boliviensis_boliviensis
ENSVPAG00000012043	SAFB	75	47.175	ENSSFOG00015008156	safb	69	54.755	Scleropages_formosus
ENSVPAG00000012043	SAFB	63	49.565	ENSSDUG00000009652	safb	60	50.152	Seriola_dumerili
ENSVPAG00000012043	SAFB	79	89.844	ENSSARG00000010475	SAFB	76	90.265	Sorex_araneus
ENSVPAG00000012043	SAFB	62	64.159	ENSSPUG00000009747	-	70	60.606	Sphenodon_punctatus
ENSVPAG00000012043	SAFB	79	100.000	ENSSSCG00000013522	SAFB	69	100.000	Sus_scrofa
ENSVPAG00000012043	SAFB	74	69.822	ENSTGUG00000000502	-	74	69.231	Taeniopygia_guttata
ENSVPAG00000012043	SAFB	57	72.174	ENSTGUG00000000489	-	73	70.513	Taeniopygia_guttata
ENSVPAG00000012043	SAFB	71	92.262	ENSTTRG00000013588	SAFB	64	94.690	Tursiops_truncatus
ENSVPAG00000012043	SAFB	63	96.923	ENSUAMG00000024543	SAFB	70	96.923	Ursus_americanus
ENSVPAG00000012043	SAFB	68	98.438	ENSUMAG00000009734	SAFB	69	98.425	Ursus_maritimus
ENSVPAG00000012043	SAFB	79	97.692	ENSVVUG00000013720	SAFB	64	97.692	Vulpes_vulpes
ENSVPAG00000012043	SAFB	60	69.737	ENSXETG00000008755	safb	72	64.012	Xenopus_tropicalis