EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000012399 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 73221 bases
Position: chrGeneScaffold_1745:215297-288517
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000011527	RIO1	PF01163.22	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000012398	-	1578	-	ENSVPAP00000011527	526 (aa)	-	UPI00018BDB2A

Gene Model

Click here to download ENSVPAG00000012399's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000012399's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000012399	-	68	99.379	ENSG00000142149	HUNK	82	99.248	Homo_sapiens
ENSVPAG00000012399	-	67	99.379	ENSAMEG00000018210	HUNK	54	99.379	Ailuropoda_melanoleuca
ENSVPAG00000012399	-	66	96.273	ENSAPLG00000002063	HUNK	55	96.273	Anas_platyrhynchos
ENSVPAG00000012399	-	67	93.789	ENSACAG00000002743	HUNK	51	93.789	Anolis_carolinensis
ENSVPAG00000012399	-	67	96.732	ENSANAG00000026514	-	56	96.732	Aotus_nancymaae
ENSVPAG00000012399	-	68	99.379	ENSANAG00000018665	-	50	99.379	Aotus_nancymaae
ENSVPAG00000012399	-	68	99.379	ENSBTAG00000020762	HUNK	56	99.379	Bos_taurus
ENSVPAG00000012399	-	68	99.379	ENSCJAG00000045743	HUNK	50	99.379	Callithrix_jacchus
ENSVPAG00000012399	-	68	100.000	ENSCAFG00000008874	HUNK	56	100.000	Canis_familiaris
ENSVPAG00000012399	-	68	100.000	ENSCAFG00020026005	HUNK	50	100.000	Canis_lupus_dingo
ENSVPAG00000012399	-	68	98.758	ENSCHIG00000014504	HUNK	50	98.758	Capra_hircus
ENSVPAG00000012399	-	68	98.758	ENSCAPG00000011721	HUNK	57	98.758	Cavia_aperea
ENSVPAG00000012399	-	68	98.758	ENSCPOG00000010546	HUNK	56	98.758	Cavia_porcellus
ENSVPAG00000012399	-	68	99.379	ENSCCAG00000028641	HUNK	50	99.379	Cebus_capucinus
ENSVPAG00000012399	-	68	99.379	ENSCATG00000028680	HUNK	52	99.379	Cercocebus_atys
ENSVPAG00000012399	-	68	98.758	ENSCLAG00000005512	HUNK	51	98.758	Chinchilla_lanigera
ENSVPAG00000012399	-	63	98.485	ENSCSAG00000009448	HUNK	55	98.485	Chlorocebus_sabaeus
ENSVPAG00000012399	-	67	95.652	ENSCPBG00000006541	HUNK	55	95.652	Chrysemys_picta_bellii
ENSVPAG00000012399	-	68	99.379	ENSCANG00000041035	HUNK	51	99.379	Colobus_angolensis_palliatus
ENSVPAG00000012399	-	68	98.137	ENSCGRG00001022573	Hunk	50	98.137	Cricetulus_griseus_chok1gshd
ENSVPAG00000012399	-	68	98.137	ENSCGRG00000013678	Hunk	57	98.137	Cricetulus_griseus_crigri
ENSVPAG00000012399	-	68	99.379	ENSDNOG00000039018	HUNK	50	99.379	Dasypus_novemcinctus
ENSVPAG00000012399	-	68	99.379	ENSDORG00000002143	Hunk	56	99.379	Dipodomys_ordii
ENSVPAG00000012399	-	68	98.758	ENSETEG00000011266	HUNK	58	98.758	Echinops_telfairi
ENSVPAG00000012399	-	68	100.000	ENSEASG00005007746	HUNK	56	99.363	Equus_asinus_asinus
ENSVPAG00000012399	-	68	100.000	ENSECAG00000007153	HUNK	52	100.000	Equus_caballus
ENSVPAG00000012399	-	68	100.000	ENSFCAG00000028905	HUNK	50	100.000	Felis_catus
ENSVPAG00000012399	-	65	96.273	ENSFALG00000008061	HUNK	52	96.273	Ficedula_albicollis
ENSVPAG00000012399	-	68	98.137	ENSFDAG00000009486	HUNK	57	98.137	Fukomys_damarensis
ENSVPAG00000012399	-	66	96.273	ENSGALG00000015879	HUNK	53	96.273	Gallus_gallus
ENSVPAG00000012399	-	61	95.455	ENSGAGG00000002645	HUNK	55	95.455	Gopherus_agassizii
ENSVPAG00000012399	-	68	99.379	ENSGGOG00000016651	HUNK	57	99.379	Gorilla_gorilla
ENSVPAG00000012399	-	68	98.758	ENSHGLG00000014832	HUNK	50	98.758	Heterocephalus_glaber_female
ENSVPAG00000012399	-	68	98.758	ENSHGLG00100007886	HUNK	50	98.758	Heterocephalus_glaber_male
ENSVPAG00000012399	-	68	99.379	ENSSTOG00000024744	HUNK	50	99.379	Ictidomys_tridecemlineatus
ENSVPAG00000012399	-	68	98.758	ENSJJAG00000014419	Hunk	56	98.758	Jaculus_jaculus
ENSVPAG00000012399	-	68	99.379	ENSLAFG00000004577	HUNK	56	99.379	Loxodonta_africana
ENSVPAG00000012399	-	63	99.242	ENSMFAG00000043007	HUNK	55	99.242	Macaca_fascicularis
ENSVPAG00000012399	-	68	99.379	ENSMMUG00000012917	HUNK	82	99.248	Macaca_mulatta
ENSVPAG00000012399	-	68	99.379	ENSMLEG00000038042	HUNK	57	99.379	Mandrillus_leucophaeus
ENSVPAG00000012399	-	66	96.273	ENSMGAG00000014513	HUNK	55	96.273	Meleagris_gallopavo
ENSVPAG00000012399	-	68	98.137	ENSMOCG00000018032	Hunk	52	98.137	Microtus_ochrogaster
ENSVPAG00000012399	-	68	98.137	MGP_CAROLIEiJ_G0020945	Hunk	50	98.137	Mus_caroli
ENSVPAG00000012399	-	68	98.137	ENSMUSG00000053414	Hunk	56	98.137	Mus_musculus
ENSVPAG00000012399	-	68	98.137	MGP_PahariEiJ_G0016650	Hunk	51	98.137	Mus_pahari
ENSVPAG00000012399	-	68	98.137	MGP_SPRETEiJ_G0021851	Hunk	50	98.137	Mus_spretus
ENSVPAG00000012399	-	63	100.000	ENSMPUG00000001113	HUNK	55	100.000	Mustela_putorius_furo
ENSVPAG00000012399	-	68	98.137	ENSNGAG00000000191	-	51	98.137	Nannospalax_galili
ENSVPAG00000012399	-	68	99.379	ENSNLEG00000036238	HUNK	50	99.379	Nomascus_leucogenys
ENSVPAG00000012399	-	66	98.137	ENSOPRG00000009958	HUNK	51	98.137	Ochotona_princeps
ENSVPAG00000012399	-	68	98.758	ENSODEG00000002662	HUNK	50	98.758	Octodon_degus
ENSVPAG00000012399	-	66	99.379	ENSOCUG00000005096	HUNK	56	99.379	Oryctolagus_cuniculus
ENSVPAG00000012399	-	68	99.379	ENSPPAG00000032225	HUNK	50	99.379	Pan_paniscus
ENSVPAG00000012399	-	68	100.000	ENSPPRG00000022852	HUNK	50	100.000	Panthera_pardus
ENSVPAG00000012399	-	68	100.000	ENSPTIG00000021583	HUNK	57	100.000	Panthera_tigris_altaica
ENSVPAG00000012399	-	68	99.379	ENSPTRG00000013849	HUNK	50	99.379	Pan_troglodytes
ENSVPAG00000012399	-	68	99.379	ENSPANG00000022529	HUNK	50	99.379	Papio_anubis
ENSVPAG00000012399	-	61	95.455	ENSPSIG00000014236	HUNK	55	95.455	Pelodiscus_sinensis
ENSVPAG00000012399	-	68	98.758	ENSPEMG00000005678	Hunk	52	98.758	Peromyscus_maniculatus_bairdii
ENSVPAG00000012399	-	68	99.379	ENSPPYG00000011356	HUNK	54	99.379	Pongo_abelii
ENSVPAG00000012399	-	68	98.780	ENSPCOG00000007940	HUNK	50	98.780	Propithecus_coquereli
ENSVPAG00000012399	-	68	100.000	ENSPVAG00000005225	HUNK	50	100.000	Pteropus_vampyrus
ENSVPAG00000012399	-	68	98.137	ENSRNOG00000002092	Hunk	50	98.137	Rattus_norvegicus
ENSVPAG00000012399	-	68	99.379	ENSRBIG00000031500	HUNK	55	99.242	Rhinopithecus_bieti
ENSVPAG00000012399	-	68	99.379	ENSRROG00000037737	HUNK	50	99.379	Rhinopithecus_roxellana
ENSVPAG00000012399	-	63	99.242	ENSSBOG00000026563	HUNK	55	99.242	Saimiri_boliviensis_boliviensis
ENSVPAG00000012399	-	66	95.031	ENSSHAG00000009609	HUNK	55	95.455	Sarcophilus_harrisii
ENSVPAG00000012399	-	65	95.652	ENSSPUG00000012338	HUNK	52	95.652	Sphenodon_punctatus
ENSVPAG00000012399	-	67	100.000	ENSSSCG00000029392	HUNK	54	100.000	Sus_scrofa
ENSVPAG00000012399	-	66	96.273	ENSTGUG00000013465	HUNK	51	96.273	Taeniopygia_guttata
ENSVPAG00000012399	-	68	99.379	ENSUAMG00000027223	HUNK	56	99.379	Ursus_americanus
ENSVPAG00000012399	-	68	99.379	ENSUMAG00000017146	HUNK	56	98.780	Ursus_maritimus
ENSVPAG00000012399	-	68	99.379	ENSVVUG00000002915	HUNK	57	99.379	Vulpes_vulpes