EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000012400 (Gene tree)
Gene ID: -
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 22890 bases
Position: chrGeneScaffold_132:719-23608
Accession: 25652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000011530	MMR_HSR1	PF01926.23	1.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000012401	LSG1-201	1869	-	ENSVPAP00000011530	622 (aa)	-	UPI00018BCE61

Gene Model

Click here to download ENSVPAG00000012400's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000012400's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000012400	LSG1	99	80.320	ENSG00000041802	LSG1	99	81.000	Homo_sapiens
ENSVPAG00000012400	LSG1	100	61.783	ENSAPOG00000009694	lsg1	95	62.420	Acanthochromis_polyacanthus
ENSVPAG00000012400	LSG1	100	78.788	ENSAMEG00000009343	LSG1	95	78.788	Ailuropoda_melanoleuca
ENSVPAG00000012400	LSG1	100	61.600	ENSACIG00000012406	lsg1	95	61.600	Amphilophus_citrinellus
ENSVPAG00000012400	LSG1	100	60.510	ENSAOCG00000016066	lsg1	95	62.102	Amphiprion_ocellaris
ENSVPAG00000012400	LSG1	100	60.191	ENSAPEG00000003252	lsg1	95	61.624	Amphiprion_percula
ENSVPAG00000012400	LSG1	100	61.244	ENSATEG00000011794	lsg1	95	61.722	Anabas_testudineus
ENSVPAG00000012400	LSG1	99	59.685	ENSACAG00000004222	LSG1	99	59.685	Anolis_carolinensis
ENSVPAG00000012400	LSG1	99	81.280	ENSANAG00000021153	LSG1	95	81.280	Aotus_nancymaae
ENSVPAG00000012400	LSG1	100	60.726	ENSACLG00000000520	lsg1	95	61.041	Astatotilapia_calliptera
ENSVPAG00000012400	LSG1	100	59.752	ENSAMXG00000008271	lsg1	95	60.587	Astyanax_mexicanus
ENSVPAG00000012400	LSG1	99	83.494	ENSBTAG00000008461	LSG1	95	83.494	Bos_taurus
ENSVPAG00000012400	LSG1	63	51.020	WBGene00016907	C53H9.2	78	57.258	Caenorhabditis_elegans
ENSVPAG00000012400	LSG1	99	80.480	ENSCJAG00000013962	LSG1	95	80.480	Callithrix_jacchus
ENSVPAG00000012400	LSG1	100	79.553	ENSCAFG00000013445	LSG1	100	79.553	Canis_familiaris
ENSVPAG00000012400	LSG1	100	79.491	ENSCAFG00020002216	LSG1	99	79.327	Canis_lupus_dingo
ENSVPAG00000012400	LSG1	100	82.907	ENSCHIG00000015769	LSG1	95	82.907	Capra_hircus
ENSVPAG00000012400	LSG1	99	79.840	ENSTSYG00000001447	LSG1	95	79.840	Carlito_syrichta
ENSVPAG00000012400	LSG1	99	70.860	ENSCAPG00000009856	LSG1	99	71.019	Cavia_aperea
ENSVPAG00000012400	LSG1	99	79.840	ENSCCAG00000035744	LSG1	95	79.840	Cebus_capucinus
ENSVPAG00000012400	LSG1	99	81.120	ENSCATG00000042060	LSG1	95	79.421	Cercocebus_atys
ENSVPAG00000012400	LSG1	99	81.120	ENSCSAG00000008796	LSG1	87	81.120	Chlorocebus_sabaeus
ENSVPAG00000012400	LSG1	100	67.834	ENSCPBG00000015941	LSG1	79	68.153	Chrysemys_picta_bellii
ENSVPAG00000012400	LSG1	68	61.579	ENSCING00000007079	-	91	61.579	Ciona_intestinalis
ENSVPAG00000012400	LSG1	76	51.311	ENSCSAVG00000002514	-	93	51.311	Ciona_savignyi
ENSVPAG00000012400	LSG1	99	80.800	ENSCANG00000030709	LSG1	95	80.800	Colobus_angolensis_palliatus
ENSVPAG00000012400	LSG1	99	76.518	ENSCGRG00001019846	Lsg1	95	76.518	Cricetulus_griseus_chok1gshd
ENSVPAG00000012400	LSG1	99	76.518	ENSCGRG00000014617	Lsg1	95	76.518	Cricetulus_griseus_crigri
ENSVPAG00000012400	LSG1	100	60.413	ENSCSEG00000008522	lsg1	95	60.413	Cynoglossus_semilaevis
ENSVPAG00000012400	LSG1	100	61.920	ENSCVAG00000002484	lsg1	95	62.798	Cyprinodon_variegatus
ENSVPAG00000012400	LSG1	100	62.321	ENSDARG00000015352	lsg1	95	62.639	Danio_rerio
ENSVPAG00000012400	LSG1	99	78.185	ENSDNOG00000006224	LSG1	95	78.185	Dasypus_novemcinctus
ENSVPAG00000012400	LSG1	81	52.885	FBgn0266284	Ns3	94	43.790	Drosophila_melanogaster
ENSVPAG00000012400	LSG1	84	97.619	ENSETEG00000003888	LSG1	80	97.619	Echinops_telfairi
ENSVPAG00000012400	LSG1	93	52.843	ENSEBUG00000003119	lsg1	85	52.736	Eptatretus_burgeri
ENSVPAG00000012400	LSG1	99	81.760	ENSEASG00005000678	LSG1	95	82.080	Equus_asinus_asinus
ENSVPAG00000012400	LSG1	99	82.080	ENSECAG00000017659	LSG1	95	82.400	Equus_caballus
ENSVPAG00000012400	LSG1	79	81.197	ENSEEUG00000015217	LSG1	75	81.197	Erinaceus_europaeus
ENSVPAG00000012400	LSG1	100	59.113	ENSELUG00000023973	lsg1	95	59.113	Esox_lucius
ENSVPAG00000012400	LSG1	100	81.470	ENSFCAG00000024957	LSG1	95	81.470	Felis_catus
ENSVPAG00000012400	LSG1	97	61.951	ENSFALG00000007210	LSG1	94	62.276	Ficedula_albicollis
ENSVPAG00000012400	LSG1	99	71.955	ENSFDAG00000017373	LSG1	95	72.800	Fukomys_damarensis
ENSVPAG00000012400	LSG1	99	60.635	ENSFHEG00000003680	lsg1	94	61.587	Fundulus_heteroclitus
ENSVPAG00000012400	LSG1	83	69.307	ENSGMOG00000015834	lsg1	81	69.307	Gadus_morhua
ENSVPAG00000012400	LSG1	97	61.415	ENSGALG00000007058	LSG1	82	62.684	Gallus_gallus
ENSVPAG00000012400	LSG1	99	60.606	ENSGAFG00000015831	lsg1	95	61.218	Gambusia_affinis
ENSVPAG00000012400	LSG1	99	60.159	ENSGACG00000009323	lsg1	94	60.159	Gasterosteus_aculeatus
ENSVPAG00000012400	LSG1	99	80.800	ENSGGOG00000000520	LSG1	95	80.800	Gorilla_gorilla
ENSVPAG00000012400	LSG1	100	61.234	ENSHBUG00000005659	lsg1	95	61.551	Haplochromis_burtoni
ENSVPAG00000012400	LSG1	99	66.875	ENSHGLG00000017390	LSG1	95	70.476	Heterocephalus_glaber_female
ENSVPAG00000012400	LSG1	99	66.875	ENSHGLG00100018587	LSG1	95	70.476	Heterocephalus_glaber_male
ENSVPAG00000012400	LSG1	100	60.224	ENSHCOG00000016848	lsg1	95	60.224	Hippocampus_comes
ENSVPAG00000012400	LSG1	100	62.063	ENSIPUG00000008631	lsg1	95	62.184	Ictalurus_punctatus
ENSVPAG00000012400	LSG1	78	80.785	ENSSTOG00000010234	LSG1	90	82.474	Ictidomys_tridecemlineatus
ENSVPAG00000012400	LSG1	99	75.439	ENSJJAG00000015513	Lsg1	95	75.439	Jaculus_jaculus
ENSVPAG00000012400	LSG1	100	59.585	ENSKMAG00000009681	lsg1	95	59.585	Kryptolebias_marmoratus
ENSVPAG00000012400	LSG1	100	59.360	ENSLBEG00000024261	lsg1	95	59.680	Labrus_bergylta
ENSVPAG00000012400	LSG1	100	63.233	ENSLACG00000013399	LSG1	95	64.025	Latimeria_chalumnae
ENSVPAG00000012400	LSG1	100	62.009	ENSLOCG00000004918	lsg1	95	62.166	Lepisosteus_oculatus
ENSVPAG00000012400	LSG1	99	76.960	ENSLAFG00000012919	-	95	76.960	Loxodonta_africana
ENSVPAG00000012400	LSG1	99	80.960	ENSMFAG00000039903	LSG1	95	79.260	Macaca_fascicularis
ENSVPAG00000012400	LSG1	99	81.120	ENSMMUG00000010708	LSG1	95	81.120	Macaca_mulatta
ENSVPAG00000012400	LSG1	99	80.960	ENSMNEG00000031538	LSG1	95	79.421	Macaca_nemestrina
ENSVPAG00000012400	LSG1	99	80.960	ENSMLEG00000041184	LSG1	95	80.960	Mandrillus_leucophaeus
ENSVPAG00000012400	LSG1	100	59.874	ENSMAMG00000000470	lsg1	95	59.874	Mastacembelus_armatus
ENSVPAG00000012400	LSG1	100	61.234	ENSMZEG00005017865	lsg1	95	61.551	Maylandia_zebra
ENSVPAG00000012400	LSG1	93	60.870	ENSMGAG00000007050	LSG1	99	62.437	Meleagris_gallopavo
ENSVPAG00000012400	LSG1	91	74.296	ENSMAUG00000016976	Lsg1	87	74.296	Mesocricetus_auratus
ENSVPAG00000012400	LSG1	99	79.040	ENSMICG00000049087	LSG1	95	79.040	Microcebus_murinus
ENSVPAG00000012400	LSG1	99	74.801	ENSMOCG00000022136	Lsg1	95	74.960	Microtus_ochrogaster
ENSVPAG00000012400	LSG1	84	71.617	ENSMMOG00000008884	lsg1	94	71.617	Mola_mola
ENSVPAG00000012400	LSG1	100	55.696	ENSMODG00000019828	LSG1	95	55.836	Monodelphis_domestica
ENSVPAG00000012400	LSG1	100	74.641	MGP_CAROLIEiJ_G0020648	Lsg1	95	75.080	Mus_caroli
ENSVPAG00000012400	LSG1	100	75.559	ENSMUSG00000022538	Lsg1	95	75.879	Mus_musculus
ENSVPAG00000012400	LSG1	100	75.879	MGP_PahariEiJ_G0016352	Lsg1	95	76.198	Mus_pahari
ENSVPAG00000012400	LSG1	100	75.120	MGP_SPRETEiJ_G0021544	Lsg1	95	75.559	Mus_spretus
ENSVPAG00000012400	LSG1	100	80.192	ENSMPUG00000003734	LSG1	95	80.192	Mustela_putorius_furo
ENSVPAG00000012400	LSG1	100	81.659	ENSMLUG00000012548	LSG1	95	81.659	Myotis_lucifugus
ENSVPAG00000012400	LSG1	99	74.519	ENSNGAG00000021872	Lsg1	95	75.520	Nannospalax_galili
ENSVPAG00000012400	LSG1	99	81.440	ENSNLEG00000008293	LSG1	95	81.440	Nomascus_leucogenys
ENSVPAG00000012400	LSG1	68	69.806	ENSMEUG00000009041	-	79	69.806	Notamacropus_eugenii
ENSVPAG00000012400	LSG1	100	60.345	ENSONIG00000002635	lsg1	95	61.189	Oreochromis_niloticus
ENSVPAG00000012400	LSG1	100	67.943	ENSOANG00000012742	LSG1	99	67.943	Ornithorhynchus_anatinus
ENSVPAG00000012400	LSG1	99	77.920	ENSOCUG00000004817	LSG1	95	79.200	Oryctolagus_cuniculus
ENSVPAG00000012400	LSG1	100	60.800	ENSORLG00000007695	lsg1	95	61.502	Oryzias_latipes
ENSVPAG00000012400	LSG1	100	60.480	ENSORLG00020016286	lsg1	95	60.254	Oryzias_latipes_hni
ENSVPAG00000012400	LSG1	100	60.320	ENSORLG00015012025	lsg1	95	60.640	Oryzias_latipes_hsok
ENSVPAG00000012400	LSG1	100	60.064	ENSOMEG00000022379	lsg1	95	60.064	Oryzias_melastigma
ENSVPAG00000012400	LSG1	99	79.332	ENSOGAG00000003475	LSG1	95	79.332	Otolemur_garnettii
ENSVPAG00000012400	LSG1	100	82.907	ENSOARG00000020403	LSG1	95	82.907	Ovis_aries
ENSVPAG00000012400	LSG1	99	80.320	ENSPPAG00000029271	LSG1	95	80.320	Pan_paniscus
ENSVPAG00000012400	LSG1	100	80.253	ENSPPRG00000010281	LSG1	95	80.253	Panthera_pardus
ENSVPAG00000012400	LSG1	100	81.310	ENSPTIG00000010789	LSG1	95	81.310	Panthera_tigris_altaica
ENSVPAG00000012400	LSG1	99	80.160	ENSPTRG00000015760	LSG1	95	80.160	Pan_troglodytes
ENSVPAG00000012400	LSG1	99	80.800	ENSPANG00000018249	LSG1	95	79.100	Papio_anubis
ENSVPAG00000012400	LSG1	99	60.128	ENSPKIG00000002895	lsg1	95	61.173	Paramormyrops_kingsleyae
ENSVPAG00000012400	LSG1	100	62.539	ENSPSIG00000009821	LSG1	99	62.539	Pelodiscus_sinensis
ENSVPAG00000012400	LSG1	100	62.003	ENSPMGG00000000931	lsg1	100	62.003	Periophthalmus_magnuspinnatus
ENSVPAG00000012400	LSG1	99	75.159	ENSPEMG00000012082	-	95	75.159	Peromyscus_maniculatus_bairdii
ENSVPAG00000012400	LSG1	99	56.082	ENSPMAG00000007451	lsg1	95	56.082	Petromyzon_marinus
ENSVPAG00000012400	LSG1	100	66.839	ENSPCIG00000013890	LSG1	78	66.839	Phascolarctos_cinereus
ENSVPAG00000012400	LSG1	99	62.141	ENSPFOG00000021882	lsg1	95	62.460	Poecilia_formosa
ENSVPAG00000012400	LSG1	99	61.182	ENSPLAG00000019536	lsg1	95	61.661	Poecilia_latipinna
ENSVPAG00000012400	LSG1	99	61.465	ENSPMEG00000017281	lsg1	95	61.783	Poecilia_mexicana
ENSVPAG00000012400	LSG1	99	51.730	ENSPREG00000006048	lsg1	94	51.730	Poecilia_reticulata
ENSVPAG00000012400	LSG1	92	79.094	ENSPPYG00000014425	LSG1	95	79.094	Pongo_abelii
ENSVPAG00000012400	LSG1	84	95.238	ENSPCAG00000005511	LSG1	80	95.238	Procavia_capensis
ENSVPAG00000012400	LSG1	99	80.000	ENSPCOG00000012360	LSG1	95	80.000	Propithecus_coquereli
ENSVPAG00000012400	LSG1	100	60.568	ENSPNYG00000021994	lsg1	95	60.883	Pundamilia_nyererei
ENSVPAG00000012400	LSG1	100	62.282	ENSPNAG00000015533	lsg1	95	62.282	Pygocentrus_nattereri
ENSVPAG00000012400	LSG1	100	74.245	ENSRNOG00000001727	Lsg1	95	75.873	Rattus_norvegicus
ENSVPAG00000012400	LSG1	99	80.160	ENSRBIG00000029053	LSG1	95	80.160	Rhinopithecus_bieti
ENSVPAG00000012400	LSG1	99	80.160	ENSRROG00000037702	LSG1	95	80.160	Rhinopithecus_roxellana
ENSVPAG00000012400	LSG1	59	56.886	YGL099W	LSG1	59	56.886	Saccharomyces_cerevisiae
ENSVPAG00000012400	LSG1	99	81.280	ENSSBOG00000034938	LSG1	95	81.280	Saimiri_boliviensis_boliviensis
ENSVPAG00000012400	LSG1	78	64.919	ENSSHAG00000003487	LSG1	94	64.414	Sarcophilus_harrisii
ENSVPAG00000012400	LSG1	100	60.731	ENSSFOG00015008955	lsg1	95	61.049	Scleropages_formosus
ENSVPAG00000012400	LSG1	100	62.041	ENSSDUG00000004622	lsg1	95	62.041	Seriola_dumerili
ENSVPAG00000012400	LSG1	100	61.600	ENSSLDG00000010869	lsg1	95	61.600	Seriola_lalandi_dorsalis
ENSVPAG00000012400	LSG1	73	82.456	ENSSARG00000012981	LSG1	72	81.389	Sorex_araneus
ENSVPAG00000012400	LSG1	100	65.258	ENSSPUG00000016347	LSG1	95	65.258	Sphenodon_punctatus
ENSVPAG00000012400	LSG1	100	59.936	ENSSPAG00000005508	lsg1	95	60.890	Stegastes_partitus
ENSVPAG00000012400	LSG1	100	83.040	ENSSSCG00000011827	LSG1	95	83.040	Sus_scrofa
ENSVPAG00000012400	LSG1	94	60.133	ENSTGUG00000009068	LSG1	100	60.797	Taeniopygia_guttata
ENSVPAG00000012400	LSG1	100	57.346	ENSTRUG00000017380	lsg1	95	57.278	Takifugu_rubripes
ENSVPAG00000012400	LSG1	100	60.726	ENSTNIG00000015570	lsg1	95	61.173	Tetraodon_nigroviridis
ENSVPAG00000012400	LSG1	100	76.518	ENSTTRG00000000559	LSG1	95	76.518	Tursiops_truncatus
ENSVPAG00000012400	LSG1	100	80.032	ENSUAMG00000012454	LSG1	95	80.032	Ursus_americanus
ENSVPAG00000012400	LSG1	100	80.032	ENSUMAG00000000855	LSG1	95	80.032	Ursus_maritimus
ENSVPAG00000012400	LSG1	100	78.914	ENSVVUG00000008956	LSG1	97	78.914	Vulpes_vulpes
ENSVPAG00000012400	LSG1	99	62.893	ENSXETG00000003451	lsg1	95	63.505	Xenopus_tropicalis
ENSVPAG00000012400	LSG1	99	60.606	ENSXCOG00000003239	lsg1	95	60.606	Xiphophorus_couchianus
ENSVPAG00000012400	LSG1	99	60.320	ENSXMAG00000005536	lsg1	95	60.640	Xiphophorus_maculatus