EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000000208 (Gene tree)
Gene ID: -
Gene Symbol: ZC3H4
Alias: -
Full Name: zinc finger CCCH-type containing 4
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 44353 bases
Position: chrNBDQ01000102.1:4378985-4423337
Accession: 17808
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000000264	zf-CCCH	PF00642.24	4.6e-13	1	1
ENSVVUP00000000246	zf-CCCH	PF00642.24	5e-13	1	1
ENSVVUP00000000203	zf-CCCH	PF00642.24	5.2e-13	1	1
ENSVVUP00000000235	zf-CCCH	PF00642.24	5.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000000331	ZC3H4-201	6539	-	ENSVVUP00000000203	1236 (aa)	-	-
ENSVVUT00000000393	ZC3H4-203	7136	-	ENSVVUP00000000246	1220 (aa)	-	-
ENSVVUT00000000376	ZC3H4-202	6561	-	ENSVVUP00000000235	1245 (aa)	-	-
ENSVVUT00000000422	ZC3H4-204	6384	-	ENSVVUP00000000264	1186 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000000208's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000000208's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000000208	ZC3H4	63	45.161	ENSVVUG00000028662	ZC3H6	59	62.791

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000000208	ZC3H4	78	88.470	ENSG00000130749	ZC3H4	94	93.623	Homo_sapiens
ENSVVUG00000000208	ZC3H4	94	71.949	ENSACAG00000003986	ZC3H4	94	63.494	Anolis_carolinensis
ENSVVUG00000000208	ZC3H4	99	94.436	ENSBTAG00000009286	ZC3H4	92	94.160	Bos_taurus
ENSVVUG00000000208	ZC3H4	100	90.405	ENSCJAG00000011601	ZC3H4	94	91.216	Callithrix_jacchus
ENSVVUG00000000208	ZC3H4	80	86.918	ENSCHIG00000013956	ZC3H4	90	92.399	Capra_hircus
ENSVVUG00000000208	ZC3H4	100	90.909	ENSCCAG00000037597	ZC3H4	94	93.758	Cebus_capucinus
ENSVVUG00000000208	ZC3H4	90	88.218	ENSCLAG00000001032	ZC3H4	100	96.128	Chinchilla_lanigera
ENSVVUG00000000208	ZC3H4	71	76.716	ENSCPBG00000001719	ZC3H4	94	72.213	Chrysemys_picta_bellii
ENSVVUG00000000208	ZC3H4	79	83.953	ENSCGRG00001016116	Zc3h4	97	84.254	Cricetulus_griseus_chok1gshd
ENSVVUG00000000208	ZC3H4	99	92.982	ENSDNOG00000003764	ZC3H4	91	93.669	Dasypus_novemcinctus
ENSVVUG00000000208	ZC3H4	98	84.708	ENSDORG00000002726	Zc3h4	100	84.043	Dipodomys_ordii
ENSVVUG00000000208	ZC3H4	81	98.864	ENSETEG00000005763	ZC3H4	77	98.851	Echinops_telfairi
ENSVVUG00000000208	ZC3H4	100	91.837	ENSECAG00000024342	ZC3H4	97	91.350	Equus_caballus
ENSVVUG00000000208	ZC3H4	80	84.524	ENSEEUG00000000519	ZC3H4	66	96.552	Erinaceus_europaeus
ENSVVUG00000000208	ZC3H4	99	94.850	ENSFCAG00000004835	ZC3H4	94	95.238	Felis_catus
ENSVVUG00000000208	ZC3H4	80	73.068	ENSGAGG00000019319	ZC3H4	93	73.547	Gopherus_agassizii
ENSVVUG00000000208	ZC3H4	100	86.667	ENSGGOG00000013071	ZC3H4	94	93.894	Gorilla_gorilla
ENSVVUG00000000208	ZC3H4	98	85.462	ENSJJAG00000019068	Zc3h4	100	84.992	Jaculus_jaculus
ENSVVUG00000000208	ZC3H4	57	88.774	ENSLAFG00000001586	ZC3H4	94	94.286	Loxodonta_africana
ENSVVUG00000000208	ZC3H4	100	86.160	ENSMFAG00000041518	ZC3H4	94	93.487	Macaca_fascicularis
ENSVVUG00000000208	ZC3H4	98	85.430	ENSMAUG00000000068	Zc3h4	100	85.679	Mesocricetus_auratus
ENSVVUG00000000208	ZC3H4	100	91.576	ENSMICG00000008786	ZC3H4	94	94.158	Microcebus_murinus
ENSVVUG00000000208	ZC3H4	95	74.931	ENSMODG00000008978	ZC3H4	92	80.694	Monodelphis_domestica
ENSVVUG00000000208	ZC3H4	98	85.182	ENSMUSG00000059273	Zc3h4	100	85.430	Mus_musculus
ENSVVUG00000000208	ZC3H4	98	75.848	MGP_PahariEiJ_G0021089	Zc3h4	94	86.187	Mus_pahari
ENSVVUG00000000208	ZC3H4	98	83.922	MGP_SPRETEiJ_G0030312	Zc3h4	94	84.211	Mus_spretus
ENSVVUG00000000208	ZC3H4	98	83.578	ENSNGAG00000020090	Zc3h4	94	83.104	Nannospalax_galili
ENSVVUG00000000208	ZC3H4	74	92.547	ENSMEUG00000009167	ZC3H4	75	78.402	Notamacropus_eugenii
ENSVVUG00000000208	ZC3H4	94	88.478	ENSOPRG00000014889	ZC3H4	89	92.461	Ochotona_princeps
ENSVVUG00000000208	ZC3H4	98	90.868	ENSODEG00000008320	ZC3H4	100	87.960	Octodon_degus
ENSVVUG00000000208	ZC3H4	88	64.574	ENSOANG00000001794	ZC3H4	59	60.938	Ornithorhynchus_anatinus
ENSVVUG00000000208	ZC3H4	96	87.795	ENSOCUG00000026069	ZC3H4	58	96.859	Oryctolagus_cuniculus
ENSVVUG00000000208	ZC3H4	100	88.235	ENSOGAG00000031123	ZC3H4	94	94.437	Otolemur_garnettii
ENSVVUG00000000208	ZC3H4	100	86.471	ENSPTRG00000011201	ZC3H4	94	93.758	Pan_troglodytes
ENSVVUG00000000208	ZC3H4	78	72.258	ENSPSIG00000002241	ZC3H4	92	77.610	Pelodiscus_sinensis
ENSVVUG00000000208	ZC3H4	98	84.628	ENSPEMG00000009762	Zc3h4	100	82.616	Peromyscus_maniculatus_bairdii
ENSVVUG00000000208	ZC3H4	74	85.027	ENSPCAG00000014919	ZC3H4	92	88.043	Procavia_capensis
ENSVVUG00000000208	ZC3H4	94	89.967	ENSPVAG00000005687	ZC3H4	83	91.851	Pteropus_vampyrus
ENSVVUG00000000208	ZC3H4	98	85.097	ENSRNOG00000015229	Zc3h4	100	85.417	Rattus_norvegicus
ENSVVUG00000000208	ZC3H4	82	87.261	ENSSARG00000014146	ZC3H4	77	87.261	Sorex_araneus
ENSVVUG00000000208	ZC3H4	80	90.184	ENSSSCG00000003110	ZC3H4	81	92.083	Sus_scrofa