EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000000331 (Gene tree)
Gene ID: -
Gene Symbol: RNPC3
Alias: FLJ20008|KIAA1839|RBM40|SNRNP65
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 27419 bases
Position: chrNBDQ01000022.1:11436596-11464014
Accession: 112918225
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000000348	RRM_1	PF00076.22	9.7e-18	1	2
ENSVVUP00000000348	RRM_1	PF00076.22	9.7e-18	2	2
ENSVVUP00000000363	RRM_1	PF00076.22	9.7e-18	1	2
ENSVVUP00000000363	RRM_1	PF00076.22	9.7e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000000560	RNPC3-201	1644	-	ENSVVUP00000000348	518 (aa)	XP_025852100	UPI000DC6BFBB
ENSVVUT00000000583	RNPC3-202	2278	-	ENSVVUP00000000363	518 (aa)	XP_025852100	UPI000DC6BFBB

Gene Model

Click here to download ENSVVUG00000000331's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000000331's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000000331	RNPC3	100	92.857	ENSG00000185946	RNPC3	100	94.086	Homo_sapiens
ENSVVUG00000000331	RNPC3	95	56.452	ENSAPOG00000017371	rnpc3	97	56.452	Acanthochromis_polyacanthus
ENSVVUG00000000331	RNPC3	100	96.538	ENSAMEG00000001694	RNPC3	100	96.538	Ailuropoda_melanoleuca
ENSVVUG00000000331	RNPC3	95	53.400	ENSACIG00000021043	rnpc3	97	53.200	Amphilophus_citrinellus
ENSVVUG00000000331	RNPC3	95	56.313	ENSAOCG00000014052	rnpc3	95	56.112	Amphiprion_ocellaris
ENSVVUG00000000331	RNPC3	95	56.112	ENSAPEG00000008739	rnpc3	95	55.912	Amphiprion_percula
ENSVVUG00000000331	RNPC3	95	54.871	ENSATEG00000021263	rnpc3	97	54.871	Anabas_testudineus
ENSVVUG00000000331	RNPC3	87	69.383	ENSAPLG00000015605	RNPC3	99	70.044	Anas_platyrhynchos
ENSVVUG00000000331	RNPC3	95	67.480	ENSACAG00000002029	RNPC3	97	67.594	Anolis_carolinensis
ENSVVUG00000000331	RNPC3	100	92.278	ENSANAG00000019950	RNPC3	100	92.278	Aotus_nancymaae
ENSVVUG00000000331	RNPC3	94	54.858	ENSACLG00000014702	rnpc3	96	54.767	Astatotilapia_calliptera
ENSVVUG00000000331	RNPC3	94	57.551	ENSAMXG00000033372	rnpc3	96	57.551	Astyanax_mexicanus
ENSVVUG00000000331	RNPC3	100	93.629	ENSBTAG00000019091	RNPC3	100	93.629	Bos_taurus
ENSVVUG00000000331	RNPC3	100	88.031	ENSCJAG00000035686	RNPC3	100	88.417	Callithrix_jacchus
ENSVVUG00000000331	RNPC3	100	99.807	ENSCAFG00000019972	RNPC3	100	99.807	Canis_familiaris
ENSVVUG00000000331	RNPC3	100	100.000	ENSCAFG00020011300	RNPC3	100	100.000	Canis_lupus_dingo
ENSVVUG00000000331	RNPC3	100	93.436	ENSCHIG00000020361	RNPC3	100	93.436	Capra_hircus
ENSVVUG00000000331	RNPC3	100	90.154	ENSTSYG00000030256	RNPC3	100	90.154	Carlito_syrichta
ENSVVUG00000000331	RNPC3	84	78.719	ENSCAPG00000013600	RNPC3	99	77.574	Cavia_aperea
ENSVVUG00000000331	RNPC3	100	89.961	ENSCPOG00000031638	RNPC3	100	89.961	Cavia_porcellus
ENSVVUG00000000331	RNPC3	100	92.278	ENSCCAG00000024301	RNPC3	100	92.278	Cebus_capucinus
ENSVVUG00000000331	RNPC3	98	70.414	ENSCATG00000035930	-	99	69.034	Cercocebus_atys
ENSVVUG00000000331	RNPC3	99	92.442	ENSCATG00000002086	RNPC3	99	92.442	Cercocebus_atys
ENSVVUG00000000331	RNPC3	100	86.680	ENSCLAG00000005169	RNPC3	100	86.680	Chinchilla_lanigera
ENSVVUG00000000331	RNPC3	99	92.248	ENSCSAG00000001519	RNPC3	99	92.248	Chlorocebus_sabaeus
ENSVVUG00000000331	RNPC3	98	69.439	ENSCPBG00000028311	RNPC3	99	69.439	Chrysemys_picta_bellii
ENSVVUG00000000331	RNPC3	93	37.344	ENSCSAVG00000002800	-	74	61.667	Ciona_savignyi
ENSVVUG00000000331	RNPC3	99	92.248	ENSCANG00000031444	RNPC3	99	92.248	Colobus_angolensis_palliatus
ENSVVUG00000000331	RNPC3	99	89.749	ENSCGRG00001019276	Rnpc3	100	89.749	Cricetulus_griseus_chok1gshd
ENSVVUG00000000331	RNPC3	87	90.044	ENSCGRG00000000053	Rnpc3	100	90.044	Cricetulus_griseus_crigri
ENSVVUG00000000331	RNPC3	94	54.694	ENSCSEG00000013475	rnpc3	96	54.694	Cynoglossus_semilaevis
ENSVVUG00000000331	RNPC3	94	55.179	ENSCVAG00000002645	rnpc3	97	54.851	Cyprinodon_variegatus
ENSVVUG00000000331	RNPC3	95	57.631	ENSDARG00000011247	rnpc3	97	58.517	Danio_rerio
ENSVVUG00000000331	RNPC3	100	92.085	ENSDNOG00000047498	-	100	92.085	Dasypus_novemcinctus
ENSVVUG00000000331	RNPC3	100	92.471	ENSDNOG00000044555	-	100	92.471	Dasypus_novemcinctus
ENSVVUG00000000331	RNPC3	99	89.749	ENSDORG00000027343	Rnpc3	99	89.749	Dipodomys_ordii
ENSVVUG00000000331	RNPC3	94	48.919	ENSEBUG00000002068	rnpc3	97	48.718	Eptatretus_burgeri
ENSVVUG00000000331	RNPC3	100	93.629	ENSEASG00005015957	RNPC3	100	93.629	Equus_asinus_asinus
ENSVVUG00000000331	RNPC3	100	93.629	ENSECAG00000021148	RNPC3	100	93.629	Equus_caballus
ENSVVUG00000000331	RNPC3	95	53.425	ENSELUG00000002264	rnpc3	97	51.154	Esox_lucius
ENSVVUG00000000331	RNPC3	100	96.718	ENSFCAG00000024312	RNPC3	100	96.718	Felis_catus
ENSVVUG00000000331	RNPC3	87	71.586	ENSFALG00000002580	RNPC3	99	72.249	Ficedula_albicollis
ENSVVUG00000000331	RNPC3	99	90.716	ENSFDAG00000019948	RNPC3	100	90.716	Fukomys_damarensis
ENSVVUG00000000331	RNPC3	95	51.107	ENSFHEG00000020647	rnpc3	98	50.294	Fundulus_heteroclitus
ENSVVUG00000000331	RNPC3	94	54.747	ENSGMOG00000019213	rnpc3	95	53.213	Gadus_morhua
ENSVVUG00000000331	RNPC3	95	71.717	ENSGALG00000005162	RNPC3	89	71.111	Gallus_gallus
ENSVVUG00000000331	RNPC3	96	52.767	ENSGAFG00000017236	rnpc3	96	53.213	Gambusia_affinis
ENSVVUG00000000331	RNPC3	94	54.990	ENSGACG00000002048	rnpc3	96	54.781	Gasterosteus_aculeatus
ENSVVUG00000000331	RNPC3	95	70.825	ENSGAGG00000008438	RNPC3	98	69.531	Gopherus_agassizii
ENSVVUG00000000331	RNPC3	98	74.951	ENSGGOG00000026201	-	99	74.419	Gorilla_gorilla
ENSVVUG00000000331	RNPC3	78	78.947	ENSHBUG00000015966	rnpc3	82	78.947	Haplochromis_burtoni
ENSVVUG00000000331	RNPC3	100	90.927	ENSHGLG00000001708	RNPC3	100	90.927	Heterocephalus_glaber_female
ENSVVUG00000000331	RNPC3	100	90.927	ENSHGLG00100003005	RNPC3	100	90.927	Heterocephalus_glaber_male
ENSVVUG00000000331	RNPC3	95	54.016	ENSHCOG00000017135	rnpc3	97	54.016	Hippocampus_comes
ENSVVUG00000000331	RNPC3	95	56.513	ENSIPUG00000002916	rnpc3	97	56.375	Ictalurus_punctatus
ENSVVUG00000000331	RNPC3	100	90.541	ENSSTOG00000025020	RNPC3	100	90.541	Ictidomys_tridecemlineatus
ENSVVUG00000000331	RNPC3	99	85.687	ENSJJAG00000010203	Rnpc3	100	87.234	Jaculus_jaculus
ENSVVUG00000000331	RNPC3	95	54.949	ENSKMAG00000017358	rnpc3	97	54.365	Kryptolebias_marmoratus
ENSVVUG00000000331	RNPC3	95	55.040	ENSLBEG00000024901	rnpc3	95	55.040	Labrus_bergylta
ENSVVUG00000000331	RNPC3	94	62.146	ENSLACG00000005720	RNPC3	90	62.753	Latimeria_chalumnae
ENSVVUG00000000331	RNPC3	94	58.487	ENSLOCG00000007986	rnpc3	96	60.736	Lepisosteus_oculatus
ENSVVUG00000000331	RNPC3	99	90.135	ENSLAFG00000032342	RNPC3	100	91.489	Loxodonta_africana
ENSVVUG00000000331	RNPC3	99	92.248	ENSMFAG00000002004	RNPC3	99	92.248	Macaca_fascicularis
ENSVVUG00000000331	RNPC3	99	67.054	ENSMFAG00000002917	-	99	67.248	Macaca_fascicularis
ENSVVUG00000000331	RNPC3	81	84.186	ENSMMUG00000002098	-	91	84.186	Macaca_mulatta
ENSVVUG00000000331	RNPC3	99	92.248	ENSMMUG00000018039	RNPC3	99	92.248	Macaca_mulatta
ENSVVUG00000000331	RNPC3	99	87.597	ENSMNEG00000033950	RNPC3	99	87.597	Macaca_nemestrina
ENSVVUG00000000331	RNPC3	98	63.851	ENSMNEG00000029209	-	99	66.012	Macaca_nemestrina
ENSVVUG00000000331	RNPC3	98	69.922	ENSMLEG00000034644	-	98	66.602	Mandrillus_leucophaeus
ENSVVUG00000000331	RNPC3	99	92.442	ENSMLEG00000033628	RNPC3	99	92.442	Mandrillus_leucophaeus
ENSVVUG00000000331	RNPC3	95	51.303	ENSMAMG00000007496	rnpc3	97	50.097	Mastacembelus_armatus
ENSVVUG00000000331	RNPC3	94	53.968	ENSMZEG00005020233	rnpc3	97	53.678	Maylandia_zebra
ENSVVUG00000000331	RNPC3	87	70.989	ENSMGAG00000006381	RNPC3	99	71.209	Meleagris_gallopavo
ENSVVUG00000000331	RNPC3	96	90.982	ENSMAUG00000001358	Rnpc3	100	89.749	Mesocricetus_auratus
ENSVVUG00000000331	RNPC3	99	92.843	ENSMICG00000029591	RNPC3	99	92.843	Microcebus_murinus
ENSVVUG00000000331	RNPC3	97	90.200	ENSMOCG00000013423	Rnpc3	100	88.996	Microtus_ochrogaster
ENSVVUG00000000331	RNPC3	95	51.521	ENSMMOG00000005309	rnpc3	97	51.503	Mola_mola
ENSVVUG00000000331	RNPC3	99	78.530	ENSMODG00000002946	RNPC3	99	78.530	Monodelphis_domestica
ENSVVUG00000000331	RNPC3	94	53.012	ENSMALG00000015471	rnpc3	97	53.012	Monopterus_albus
ENSVVUG00000000331	RNPC3	99	87.621	MGP_CAROLIEiJ_G0025555	Rnpc3	100	87.621	Mus_caroli
ENSVVUG00000000331	RNPC3	99	88.008	ENSMUSG00000027981	Rnpc3	100	88.008	Mus_musculus
ENSVVUG00000000331	RNPC3	99	88.008	MGP_PahariEiJ_G0027001	Rnpc3	100	88.008	Mus_pahari
ENSVVUG00000000331	RNPC3	99	87.427	MGP_SPRETEiJ_G0026505	Rnpc3	100	87.427	Mus_spretus
ENSVVUG00000000331	RNPC3	100	96.332	ENSMPUG00000007349	RNPC3	100	96.332	Mustela_putorius_furo
ENSVVUG00000000331	RNPC3	100	90.347	ENSMLUG00000028743	RNPC3	100	90.347	Myotis_lucifugus
ENSVVUG00000000331	RNPC3	99	88.953	ENSNGAG00000010939	Rnpc3	99	88.953	Nannospalax_galili
ENSVVUG00000000331	RNPC3	94	54.564	ENSNBRG00000012196	rnpc3	93	54.564	Neolamprologus_brichardi
ENSVVUG00000000331	RNPC3	100	92.664	ENSNLEG00000012013	RNPC3	100	92.664	Nomascus_leucogenys
ENSVVUG00000000331	RNPC3	100	88.417	ENSODEG00000007612	RNPC3	100	88.417	Octodon_degus
ENSVVUG00000000331	RNPC3	94	54.858	ENSONIG00000004770	rnpc3	99	54.970	Oreochromis_niloticus
ENSVVUG00000000331	RNPC3	90	78.112	ENSOANG00000008220	RNPC3	99	78.541	Ornithorhynchus_anatinus
ENSVVUG00000000331	RNPC3	100	91.313	ENSOCUG00000004016	RNPC3	100	91.313	Oryctolagus_cuniculus
ENSVVUG00000000331	RNPC3	95	53.722	ENSORLG00000005694	rnpc3	97	51.953	Oryzias_latipes
ENSVVUG00000000331	RNPC3	95	54.234	ENSORLG00020005513	rnpc3	97	52.539	Oryzias_latipes_hni
ENSVVUG00000000331	RNPC3	95	53.831	ENSORLG00015002179	rnpc3	97	52.148	Oryzias_latipes_hsok
ENSVVUG00000000331	RNPC3	95	54.343	ENSOMEG00000017737	rnpc3	97	55.645	Oryzias_melastigma
ENSVVUG00000000331	RNPC3	100	92.664	ENSOGAG00000026182	RNPC3	100	92.664	Otolemur_garnettii
ENSVVUG00000000331	RNPC3	100	93.243	ENSOARG00000018719	RNPC3	100	93.243	Ovis_aries
ENSVVUG00000000331	RNPC3	100	92.486	ENSPPAG00000037459	RNPC3	100	92.486	Pan_paniscus
ENSVVUG00000000331	RNPC3	100	74.903	ENSPPAG00000030278	-	100	75.097	Pan_paniscus
ENSVVUG00000000331	RNPC3	100	97.490	ENSPPRG00000020246	RNPC3	100	97.490	Panthera_pardus
ENSVVUG00000000331	RNPC3	98	97.441	ENSPTIG00000009887	RNPC3	100	97.441	Panthera_tigris_altaica
ENSVVUG00000000331	RNPC3	100	92.664	ENSPTRG00000033902	RNPC3	100	92.664	Pan_troglodytes
ENSVVUG00000000331	RNPC3	100	74.903	ENSPTRG00000044227	-	100	74.903	Pan_troglodytes
ENSVVUG00000000331	RNPC3	99	92.442	ENSPANG00000012137	RNPC3	99	92.442	Papio_anubis
ENSVVUG00000000331	RNPC3	98	73.084	ENSPANG00000029957	-	100	71.906	Papio_anubis
ENSVVUG00000000331	RNPC3	95	52.157	ENSPKIG00000008828	rnpc3	95	51.772	Paramormyrops_kingsleyae
ENSVVUG00000000331	RNPC3	63	68.675	ENSPSIG00000007396	RNPC3	99	67.169	Pelodiscus_sinensis
ENSVVUG00000000331	RNPC3	93	51.844	ENSPMGG00000011742	rnpc3	95	52.361	Periophthalmus_magnuspinnatus
ENSVVUG00000000331	RNPC3	88	89.059	ENSPEMG00000020112	Rnpc3	100	89.823	Peromyscus_maniculatus_bairdii
ENSVVUG00000000331	RNPC3	96	45.681	ENSPMAG00000003778	rnpc3	98	45.977	Petromyzon_marinus
ENSVVUG00000000331	RNPC3	99	79.497	ENSPCIG00000004415	-	99	79.497	Phascolarctos_cinereus
ENSVVUG00000000331	RNPC3	96	53.094	ENSPFOG00000009895	rnpc3	97	53.320	Poecilia_formosa
ENSVVUG00000000331	RNPC3	96	52.894	ENSPLAG00000012023	rnpc3	97	53.119	Poecilia_latipinna
ENSVVUG00000000331	RNPC3	96	53.293	ENSPMEG00000003663	rnpc3	97	53.521	Poecilia_mexicana
ENSVVUG00000000331	RNPC3	96	53.094	ENSPREG00000010206	rnpc3	99	52.539	Poecilia_reticulata
ENSVVUG00000000331	RNPC3	84	88.966	ENSPPYG00000001102	RNPC3	99	88.966	Pongo_abelii
ENSVVUG00000000331	RNPC3	94	54.656	ENSPNYG00000020603	rnpc3	96	54.564	Pundamilia_nyererei
ENSVVUG00000000331	RNPC3	95	54.762	ENSPNAG00000000524	rnpc3	89	54.960	Pygocentrus_nattereri
ENSVVUG00000000331	RNPC3	99	87.427	ENSRNOG00000017310	Rnpc3	100	87.427	Rattus_norvegicus
ENSVVUG00000000331	RNPC3	99	87.041	ENSRBIG00000043897	RNPC3	99	87.041	Rhinopithecus_bieti
ENSVVUG00000000331	RNPC3	99	92.829	ENSRROG00000032334	RNPC3	99	92.829	Rhinopithecus_roxellana
ENSVVUG00000000331	RNPC3	100	91.506	ENSSBOG00000024473	RNPC3	100	91.506	Saimiri_boliviensis_boliviensis
ENSVVUG00000000331	RNPC3	99	78.917	ENSSHAG00000011859	RNPC3	99	78.917	Sarcophilus_harrisii
ENSVVUG00000000331	RNPC3	95	59.394	ENSSFOG00015013055	rnpc3	99	57.367	Scleropages_formosus
ENSVVUG00000000331	RNPC3	95	52.485	ENSSMAG00000020346	rnpc3	97	50.772	Scophthalmus_maximus
ENSVVUG00000000331	RNPC3	94	54.871	ENSSDUG00000006600	rnpc3	96	54.871	Seriola_dumerili
ENSVVUG00000000331	RNPC3	94	54.980	ENSSLDG00000007979	rnpc3	96	54.980	Seriola_lalandi_dorsalis
ENSVVUG00000000331	RNPC3	96	65.800	ENSSPUG00000003872	-	93	65.800	Sphenodon_punctatus
ENSVVUG00000000331	RNPC3	95	71.457	ENSSPUG00000008539	-	94	71.805	Sphenodon_punctatus
ENSVVUG00000000331	RNPC3	95	55.285	ENSSPAG00000005633	rnpc3	97	56.098	Stegastes_partitus
ENSVVUG00000000331	RNPC3	100	93.436	ENSSSCG00000037254	RNPC3	100	92.085	Sus_scrofa
ENSVVUG00000000331	RNPC3	87	71.523	ENSTGUG00000004795	-	99	70.640	Taeniopygia_guttata
ENSVVUG00000000331	RNPC3	95	55.110	ENSTNIG00000018963	rnpc3	97	55.110	Tetraodon_nigroviridis
ENSVVUG00000000331	RNPC3	98	97.835	ENSUMAG00000007775	RNPC3	100	97.835	Ursus_maritimus
ENSVVUG00000000331	RNPC3	95	52.600	ENSXETG00000025027	rnpc3	97	52.600	Xenopus_tropicalis
ENSVVUG00000000331	RNPC3	96	52.335	ENSXCOG00000005013	rnpc3	97	51.331	Xiphophorus_couchianus
ENSVVUG00000000331	RNPC3	96	53.267	ENSXMAG00000006495	rnpc3	97	53.479	Xiphophorus_maculatus