EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000000551 (Gene tree)
Gene ID: -
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 75178 bases
Position: chrNBDQ01000205.1:1800985-1876162
Accession: 17344
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000002867	Npa1	PF11707.8	7.8e-85	1	1
ENSVVUP00000003626	Npa1	PF11707.8	1.2e-84	1	1
ENSVVUP00000003619	Npa1	PF11707.8	1.2e-84	1	1
ENSVVUP00000003558	Npa1	PF11707.8	1.2e-84	1	1
ENSVVUP00000003690	Npa1	PF11707.8	1e-83	1	1
ENSVVUP00000003497	Npa1	PF11707.8	1.8e-59	1	2
ENSVVUP00000003497	Npa1	PF11707.8	1.8e-59	2	2
ENSVVUP00000003636	Npa1	PF11707.8	1.9e-59	1	2
ENSVVUP00000003636	Npa1	PF11707.8	1.9e-59	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000004954	URB1-206	6699	-	ENSVVUP00000003636	2232 (aa)	-	-
ENSVVUT00000004944	URB1-205	6792	-	ENSVVUP00000003626	2263 (aa)	-	-
ENSVVUT00000004863	URB1-203	6789	-	ENSVVUP00000003558	2262 (aa)	-	-
ENSVVUT00000004935	URB1-204	6807	-	ENSVVUP00000003619	2268 (aa)	-	-
ENSVVUT00000003970	URB1-201	6687	-	ENSVVUP00000002867	2228 (aa)	-	-
ENSVVUT00000004787	URB1-202	6687	-	ENSVVUP00000003497	2228 (aa)	-	-
ENSVVUT00000005026	URB1-207	6549	-	ENSVVUP00000003690	2182 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000000551's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000000551's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000000551	URB1	99	82.179	ENSG00000142207	URB1	100	82.030	Homo_sapiens
ENSVVUG00000000551	URB1	96	47.328	ENSAPOG00000020308	urb1	93	54.066	Acanthochromis_polyacanthus
ENSVVUG00000000551	URB1	100	88.077	ENSAMEG00000011998	URB1	99	88.077	Ailuropoda_melanoleuca
ENSVVUG00000000551	URB1	89	56.311	ENSACIG00000003248	urb1	91	56.311	Amphilophus_citrinellus
ENSVVUG00000000551	URB1	95	53.881	ENSAOCG00000010364	urb1	98	53.881	Amphiprion_ocellaris
ENSVVUG00000000551	URB1	97	52.516	ENSAPEG00000010758	urb1	98	54.443	Amphiprion_percula
ENSVVUG00000000551	URB1	99	43.182	ENSATEG00000011790	urb1	99	43.182	Anabas_testudineus
ENSVVUG00000000551	URB1	97	57.414	ENSAPLG00000012791	URB1	100	57.505	Anas_platyrhynchos
ENSVVUG00000000551	URB1	99	53.188	ENSACAG00000002817	URB1	99	53.188	Anolis_carolinensis
ENSVVUG00000000551	URB1	100	81.055	ENSANAG00000024617	URB1	100	81.055	Aotus_nancymaae
ENSVVUG00000000551	URB1	99	44.606	ENSACLG00000024865	urb1	99	44.372	Astatotilapia_calliptera
ENSVVUG00000000551	URB1	99	39.894	ENSAMXG00000012306	urb1	99	39.921	Astyanax_mexicanus
ENSVVUG00000000551	URB1	98	86.833	ENSBTAG00000012412	URB1	99	79.842	Bos_taurus
ENSVVUG00000000551	URB1	100	80.789	ENSCJAG00000009118	URB1	100	80.789	Callithrix_jacchus
ENSVVUG00000000551	URB1	100	97.280	ENSCAFG00000008892	URB1	100	97.280	Canis_familiaris
ENSVVUG00000000551	URB1	100	96.567	ENSCAFG00020025994	-	100	96.567	Canis_lupus_dingo
ENSVVUG00000000551	URB1	100	97.579	ENSCAFG00020025987	-	100	97.579	Canis_lupus_dingo
ENSVVUG00000000551	URB1	99	79.623	ENSCHIG00000015645	URB1	99	79.632	Capra_hircus
ENSVVUG00000000551	URB1	100	80.915	ENSTSYG00000013286	URB1	99	80.915	Carlito_syrichta
ENSVVUG00000000551	URB1	98	75.326	ENSCAPG00000015589	URB1	99	75.326	Cavia_aperea
ENSVVUG00000000551	URB1	99	76.473	ENSCPOG00000006748	URB1	99	76.473	Cavia_porcellus
ENSVVUG00000000551	URB1	100	81.538	ENSCCAG00000021299	URB1	100	81.538	Cebus_capucinus
ENSVVUG00000000551	URB1	100	81.766	ENSCATG00000042630	URB1	100	81.766	Cercocebus_atys
ENSVVUG00000000551	URB1	100	77.426	ENSCLAG00000005262	URB1	100	77.426	Chinchilla_lanigera
ENSVVUG00000000551	URB1	100	79.921	ENSCSAG00000009584	URB1	100	79.921	Chlorocebus_sabaeus
ENSVVUG00000000551	URB1	99	59.198	ENSCPBG00000006454	URB1	99	59.285	Chrysemys_picta_bellii
ENSVVUG00000000551	URB1	100	81.503	ENSCANG00000031088	URB1	100	81.503	Colobus_angolensis_palliatus
ENSVVUG00000000551	URB1	98	74.944	ENSCGRG00001010616	Urb1	99	74.780	Cricetulus_griseus_chok1gshd
ENSVVUG00000000551	URB1	98	74.617	ENSCGRG00000015840	Urb1	99	74.617	Cricetulus_griseus_crigri
ENSVVUG00000000551	URB1	97	49.451	ENSCSEG00000012616	urb1	99	49.451	Cynoglossus_semilaevis
ENSVVUG00000000551	URB1	97	54.765	ENSCVAG00000009076	urb1	99	53.786	Cyprinodon_variegatus
ENSVVUG00000000551	URB1	99	42.656	ENSDARG00000060308	urb1	94	54.902	Danio_rerio
ENSVVUG00000000551	URB1	85	79.628	ENSDNOG00000015586	URB1	99	79.628	Dasypus_novemcinctus
ENSVVUG00000000551	URB1	100	77.880	ENSDORG00000006735	Urb1	100	77.880	Dipodomys_ordii
ENSVVUG00000000551	URB1	92	80.182	ENSETEG00000009080	URB1	92	80.182	Echinops_telfairi
ENSVVUG00000000551	URB1	100	83.465	ENSEASG00005007711	URB1	100	83.465	Equus_asinus_asinus
ENSVVUG00000000551	URB1	99	87.939	ENSECAG00000013206	URB1	100	87.939	Equus_caballus
ENSVVUG00000000551	URB1	58	86.667	ENSEEUG00000003626	-	58	86.667	Erinaceus_europaeus
ENSVVUG00000000551	URB1	93	55.923	ENSELUG00000020516	urb1	95	55.494	Esox_lucius
ENSVVUG00000000551	URB1	100	86.350	ENSFCAG00000002177	URB1	100	86.394	Felis_catus
ENSVVUG00000000551	URB1	94	65.595	ENSFALG00000004636	URB1	95	65.595	Ficedula_albicollis
ENSVVUG00000000551	URB1	100	76.974	ENSFDAG00000007288	URB1	95	76.974	Fukomys_damarensis
ENSVVUG00000000551	URB1	99	41.623	ENSFHEG00000000202	urb1	95	49.772	Fundulus_heteroclitus
ENSVVUG00000000551	URB1	92	47.126	ENSGMOG00000001838	urb1	93	47.126	Gadus_morhua
ENSVVUG00000000551	URB1	99	57.432	ENSGALG00000015887	URB1	99	57.432	Gallus_gallus
ENSVVUG00000000551	URB1	94	52.710	ENSGAFG00000020694	urb1	96	55.034	Gambusia_affinis
ENSVVUG00000000551	URB1	98	44.737	ENSGACG00000011703	urb1	99	44.693	Gasterosteus_aculeatus
ENSVVUG00000000551	URB1	99	58.762	ENSGAGG00000022544	URB1	99	58.762	Gopherus_agassizii
ENSVVUG00000000551	URB1	100	81.898	ENSGGOG00000000285	URB1	100	81.898	Gorilla_gorilla
ENSVVUG00000000551	URB1	99	44.577	ENSHBUG00000001904	urb1	99	44.343	Haplochromis_burtoni
ENSVVUG00000000551	URB1	99	76.223	ENSHGLG00000004907	URB1	99	76.223	Heterocephalus_glaber_female
ENSVVUG00000000551	URB1	99	76.744	ENSHGLG00100010749	URB1	99	76.744	Heterocephalus_glaber_male
ENSVVUG00000000551	URB1	70	52.233	ENSHCOG00000018683	urb1	97	52.805	Hippocampus_comes
ENSVVUG00000000551	URB1	99	39.938	ENSIPUG00000014721	urb1	99	39.938	Ictalurus_punctatus
ENSVVUG00000000551	URB1	100	79.806	ENSSTOG00000004539	URB1	100	79.806	Ictidomys_tridecemlineatus
ENSVVUG00000000551	URB1	87	55.416	ENSKMAG00000006001	urb1	95	55.416	Kryptolebias_marmoratus
ENSVVUG00000000551	URB1	92	52.106	ENSLBEG00000027208	urb1	99	51.429	Labrus_bergylta
ENSVVUG00000000551	URB1	99	48.418	ENSLACG00000017059	URB1	100	48.418	Latimeria_chalumnae
ENSVVUG00000000551	URB1	99	45.766	ENSLOCG00000009190	urb1	99	45.766	Lepisosteus_oculatus
ENSVVUG00000000551	URB1	99	77.675	ENSLAFG00000010407	URB1	99	77.675	Loxodonta_africana
ENSVVUG00000000551	URB1	100	81.678	ENSMFAG00000034391	URB1	97	81.678	Macaca_fascicularis
ENSVVUG00000000551	URB1	100	81.371	ENSMMUG00000010295	URB1	100	81.371	Macaca_mulatta
ENSVVUG00000000551	URB1	100	80.193	ENSMNEG00000032981	URB1	100	80.193	Macaca_nemestrina
ENSVVUG00000000551	URB1	100	81.634	ENSMLEG00000041435	URB1	100	81.634	Mandrillus_leucophaeus
ENSVVUG00000000551	URB1	99	43.034	ENSMAMG00000011238	urb1	95	56.033	Mastacembelus_armatus
ENSVVUG00000000551	URB1	99	42.115	ENSMZEG00005011862	urb1	99	41.901	Maylandia_zebra
ENSVVUG00000000551	URB1	98	58.036	ENSMGAG00000014512	URB1	99	58.036	Meleagris_gallopavo
ENSVVUG00000000551	URB1	94	78.894	ENSMAUG00000010516	Urb1	99	79.185	Mesocricetus_auratus
ENSVVUG00000000551	URB1	99	79.754	ENSMICG00000016424	URB1	99	79.754	Microcebus_murinus
ENSVVUG00000000551	URB1	99	73.107	ENSMOCG00000012613	Urb1	99	73.107	Microtus_ochrogaster
ENSVVUG00000000551	URB1	99	64.107	ENSMODG00000021076	URB1	99	64.107	Monodelphis_domestica
ENSVVUG00000000551	URB1	94	52.992	ENSMALG00000017411	urb1	98	52.992	Monopterus_albus
ENSVVUG00000000551	URB1	99	73.659	MGP_CAROLIEiJ_G0020948	Urb1	99	73.659	Mus_caroli
ENSVVUG00000000551	URB1	99	73.923	ENSMUSG00000039929	Urb1	99	73.923	Mus_musculus
ENSVVUG00000000551	URB1	99	74.055	MGP_PahariEiJ_G0016653	Urb1	99	74.099	Mus_pahari
ENSVVUG00000000551	URB1	99	73.670	MGP_SPRETEiJ_G0021854	Urb1	99	73.703	Mus_spretus
ENSVVUG00000000551	URB1	100	85.871	ENSMPUG00000001123	URB1	100	85.871	Mustela_putorius_furo
ENSVVUG00000000551	URB1	99	74.549	ENSNGAG00000001905	Urb1	99	74.549	Nannospalax_galili
ENSVVUG00000000551	URB1	83	43.921	ENSNBRG00000001049	urb1	99	44.859	Neolamprologus_brichardi
ENSVVUG00000000551	URB1	97	86.462	ENSNLEG00000026872	URB1	100	79.965	Nomascus_leucogenys
ENSVVUG00000000551	URB1	93	65.966	ENSMEUG00000010828	URB1	94	65.169	Notamacropus_eugenii
ENSVVUG00000000551	URB1	99	72.683	ENSOPRG00000013482	URB1	99	72.683	Ochotona_princeps
ENSVVUG00000000551	URB1	100	76.065	ENSODEG00000002587	URB1	99	76.065	Octodon_degus
ENSVVUG00000000551	URB1	99	44.755	ENSONIG00000005599	urb1	99	44.755	Oreochromis_niloticus
ENSVVUG00000000551	URB1	99	78.355	ENSOCUG00000009381	URB1	99	78.355	Oryctolagus_cuniculus
ENSVVUG00000000551	URB1	99	43.531	ENSORLG00000003429	urb1	99	43.531	Oryzias_latipes
ENSVVUG00000000551	URB1	99	43.431	ENSORLG00020013785	urb1	99	43.431	Oryzias_latipes_hni
ENSVVUG00000000551	URB1	93	50.140	ENSORLG00015019421	urb1	99	50.140	Oryzias_latipes_hsok
ENSVVUG00000000551	URB1	75	54.669	ENSOMEG00000002094	urb1	97	54.669	Oryzias_melastigma
ENSVVUG00000000551	URB1	99	80.326	ENSOGAG00000017140	URB1	100	80.326	Otolemur_garnettii
ENSVVUG00000000551	URB1	97	79.729	ENSOARG00000013679	URB1	96	84.083	Ovis_aries
ENSVVUG00000000551	URB1	100	82.425	ENSPPAG00000003423	URB1	100	82.425	Pan_paniscus
ENSVVUG00000000551	URB1	100	86.356	ENSPPRG00000023131	URB1	100	86.356	Panthera_pardus
ENSVVUG00000000551	URB1	92	84.813	ENSPTIG00000016125	URB1	98	84.813	Panthera_tigris_altaica
ENSVVUG00000000551	URB1	100	82.293	ENSPTRG00000013852	URB1	100	82.293	Pan_troglodytes
ENSVVUG00000000551	URB1	100	81.766	ENSPANG00000021964	URB1	100	81.766	Papio_anubis
ENSVVUG00000000551	URB1	97	46.464	ENSPKIG00000003683	urb1	96	46.616	Paramormyrops_kingsleyae
ENSVVUG00000000551	URB1	100	74.189	ENSPEMG00000021205	Urb1	99	74.189	Peromyscus_maniculatus_bairdii
ENSVVUG00000000551	URB1	80	33.281	ENSPMAG00000009733	URB1	99	34.524	Petromyzon_marinus
ENSVVUG00000000551	URB1	99	64.551	ENSPCIG00000016350	URB1	99	64.955	Phascolarctos_cinereus
ENSVVUG00000000551	URB1	96	43.006	ENSPLAG00000004371	urb1	99	43.006	Poecilia_latipinna
ENSVVUG00000000551	URB1	99	43.616	ENSPMEG00000006634	urb1	99	43.616	Poecilia_mexicana
ENSVVUG00000000551	URB1	99	44.174	ENSPREG00000013453	urb1	98	44.257	Poecilia_reticulata
ENSVVUG00000000551	URB1	99	81.826	ENSPPYG00000011359	URB1	100	81.678	Pongo_abelii
ENSVVUG00000000551	URB1	99	67.504	ENSPCAG00000007430	URB1	99	67.504	Procavia_capensis
ENSVVUG00000000551	URB1	98	87.060	ENSPCOG00000022695	URB1	100	81.214	Propithecus_coquereli
ENSVVUG00000000551	URB1	100	81.258	ENSPVAG00000000889	URB1	100	81.258	Pteropus_vampyrus
ENSVVUG00000000551	URB1	99	43.739	ENSPNYG00000010589	urb1	99	43.490	Pundamilia_nyererei
ENSVVUG00000000551	URB1	99	40.502	ENSPNAG00000019324	urb1	99	40.458	Pygocentrus_nattereri
ENSVVUG00000000551	URB1	99	73.626	ENSRNOG00000002080	Urb1	99	73.758	Rattus_norvegicus
ENSVVUG00000000551	URB1	100	80.783	ENSRBIG00000033122	URB1	100	80.783	Rhinopithecus_bieti
ENSVVUG00000000551	URB1	100	80.783	ENSRROG00000040237	URB1	100	80.783	Rhinopithecus_roxellana
ENSVVUG00000000551	URB1	100	81.291	ENSSBOG00000027672	URB1	100	81.291	Saimiri_boliviensis_boliviensis
ENSVVUG00000000551	URB1	99	64.126	ENSSHAG00000005140	URB1	100	64.126	Sarcophilus_harrisii
ENSVVUG00000000551	URB1	93	46.176	ENSSFOG00015000339	urb1	95	55.407	Scleropages_formosus
ENSVVUG00000000551	URB1	99	44.071	ENSSMAG00000003782	urb1	94	54.805	Scophthalmus_maximus
ENSVVUG00000000551	URB1	99	44.764	ENSSDUG00000012313	urb1	99	44.764	Seriola_dumerili
ENSVVUG00000000551	URB1	99	44.721	ENSSLDG00000023179	urb1	95	54.374	Seriola_lalandi_dorsalis
ENSVVUG00000000551	URB1	99	55.677	ENSSPUG00000012447	URB1	99	55.808	Sphenodon_punctatus
ENSVVUG00000000551	URB1	99	43.341	ENSSPAG00000006325	urb1	95	52.899	Stegastes_partitus
ENSVVUG00000000551	URB1	100	80.141	ENSSSCG00000032024	URB1	100	80.141	Sus_scrofa
ENSVVUG00000000551	URB1	74	58.577	ENSTGUG00000013442	URB1	100	58.693	Taeniopygia_guttata
ENSVVUG00000000551	URB1	99	43.364	ENSTRUG00000009372	urb1	95	52.822	Takifugu_rubripes
ENSVVUG00000000551	URB1	99	42.983	ENSTNIG00000016277	urb1	99	42.851	Tetraodon_nigroviridis
ENSVVUG00000000551	URB1	81	83.721	ENSTBEG00000010044	URB1	81	83.721	Tupaia_belangeri
ENSVVUG00000000551	URB1	91	81.420	ENSTTRG00000007712	URB1	92	81.439	Tursiops_truncatus
ENSVVUG00000000551	URB1	100	87.989	ENSUAMG00000012231	URB1	99	87.989	Ursus_americanus
ENSVVUG00000000551	URB1	96	86.782	ENSUMAG00000017419	URB1	99	86.782	Ursus_maritimus
ENSVVUG00000000551	URB1	69	91.270	ENSVPAG00000001164	URB1	68	91.270	Vicugna_pacos
ENSVVUG00000000551	URB1	99	50.367	ENSXETG00000009895	urb1	99	50.237	Xenopus_tropicalis
ENSVVUG00000000551	URB1	99	41.504	ENSXCOG00000005500	urb1	98	45.623	Xiphophorus_couchianus
ENSVVUG00000000551	URB1	99	41.511	ENSXMAG00000007253	urb1	95	52.840	Xiphophorus_maculatus