EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000000874 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 6287 bases
Position: chrNBDQ01000010.1:3547734-3554020
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000001068	RRM_1	PF00076.22	4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000001632	-	987	-	ENSVVUP00000001068	328 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000000874's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000000874's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000000874	-	60	67.464	ENSVVUG00000003390	-	50	68.067
ENSVVUG00000000874	-	82	61.538	ENSVVUG00000006414	PSPC1	61	68.067

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000000874	-	100	88.889	ENSG00000116560	SFPQ	92	87.379	Homo_sapiens
ENSVVUG00000000874	-	100	88.889	ENSAMEG00000000815	SFPQ	80	88.889	Ailuropoda_melanoleuca
ENSVVUG00000000874	-	100	65.043	ENSACIG00000000905	sfpq	55	64.470	Amphilophus_citrinellus
ENSVVUG00000000874	-	100	68.571	ENSATEG00000002981	sfpq	53	68.000	Anabas_testudineus
ENSVVUG00000000874	-	100	82.941	ENSANAG00000027438	-	57	82.941	Aotus_nancymaae
ENSVVUG00000000874	-	100	72.886	ENSANAG00000021268	-	100	72.886	Aotus_nancymaae
ENSVVUG00000000874	-	99	68.895	ENSANAG00000037798	-	99	68.895	Aotus_nancymaae
ENSVVUG00000000874	-	100	65.903	ENSACLG00000022332	sfpq	50	65.330	Astatotilapia_calliptera
ENSVVUG00000000874	-	100	64.080	ENSAMXG00000011538	sfpq	52	66.379	Astyanax_mexicanus
ENSVVUG00000000874	-	100	88.889	ENSBTAG00000016328	SFPQ	50	88.889	Bos_taurus
ENSVVUG00000000874	-	100	88.889	ENSCJAG00000001431	SFPQ	50	88.889	Callithrix_jacchus
ENSVVUG00000000874	-	100	83.476	ENSCAFG00000018271	-	53	83.476	Canis_familiaris
ENSVVUG00000000874	-	100	82.906	ENSCAFG00000017608	-	52	83.191	Canis_familiaris
ENSVVUG00000000874	-	100	88.889	ENSCAFG00000003595	-	53	88.889	Canis_familiaris
ENSVVUG00000000874	-	100	79.772	ENSCAFG00020010702	-	100	79.202	Canis_lupus_dingo
ENSVVUG00000000874	-	100	83.476	ENSCAFG00020004881	-	53	83.476	Canis_lupus_dingo
ENSVVUG00000000874	-	100	88.889	ENSTSYG00000037120	-	100	88.889	Carlito_syrichta
ENSVVUG00000000874	-	99	75.931	ENSTSYG00000035106	-	98	75.931	Carlito_syrichta
ENSVVUG00000000874	-	100	80.057	ENSCPOG00000015018	-	100	78.512	Cavia_porcellus
ENSVVUG00000000874	-	100	88.889	ENSCCAG00000029361	-	50	88.889	Cebus_capucinus
ENSVVUG00000000874	-	100	88.889	ENSCLAG00000009583	-	100	88.889	Chinchilla_lanigera
ENSVVUG00000000874	-	100	88.889	ENSCSAG00000001082	SFPQ	50	88.889	Chlorocebus_sabaeus
ENSVVUG00000000874	-	100	87.179	ENSCHOG00000009131	SFPQ	92	87.179	Choloepus_hoffmanni
ENSVVUG00000000874	-	100	83.099	ENSCPBG00000018674	SFPQ	55	82.817	Chrysemys_picta_bellii
ENSVVUG00000000874	-	100	88.889	ENSCANG00000028087	-	100	88.889	Colobus_angolensis_palliatus
ENSVVUG00000000874	-	100	88.319	ENSCGRG00001011698	Sfpq	50	88.319	Cricetulus_griseus_chok1gshd
ENSVVUG00000000874	-	100	88.319	ENSCGRG00000010128	Sfpq	78	88.319	Cricetulus_griseus_crigri
ENSVVUG00000000874	-	100	66.286	ENSCSEG00000007852	sfpq	53	64.638	Cynoglossus_semilaevis
ENSVVUG00000000874	-	100	62.464	ENSDARG00000011564	sfpq	100	83.478	Danio_rerio
ENSVVUG00000000874	-	100	88.889	ENSDNOG00000049454	SFPQ	50	88.889	Dasypus_novemcinctus
ENSVVUG00000000874	-	100	88.889	ENSDORG00000008109	Sfpq	50	88.889	Dipodomys_ordii
ENSVVUG00000000874	-	100	80.057	ENSETEG00000001095	SFPQ	50	80.057	Echinops_telfairi
ENSVVUG00000000874	-	100	88.889	ENSEASG00005012012	SFPQ	50	88.889	Equus_asinus_asinus
ENSVVUG00000000874	-	100	88.889	ENSECAG00000000642	SFPQ	50	88.889	Equus_caballus
ENSVVUG00000000874	-	100	65.988	ENSELUG00000023145	sfpq	53	64.620	Esox_lucius
ENSVVUG00000000874	-	100	88.889	ENSFCAG00000042862	SFPQ	50	88.889	Felis_catus
ENSVVUG00000000874	-	100	83.761	ENSFALG00000000731	SFPQ	100	83.761	Ficedula_albicollis
ENSVVUG00000000874	-	100	79.487	ENSFDAG00000017723	-	100	79.887	Fukomys_damarensis
ENSVVUG00000000874	-	100	65.057	ENSGMOG00000011957	sfpq	53	65.903	Gadus_morhua
ENSVVUG00000000874	-	100	67.139	ENSGMOG00000011950	SFPQ	60	67.143	Gadus_morhua
ENSVVUG00000000874	-	100	83.761	ENSGALG00000002514	SFPQ	54	83.761	Gallus_gallus
ENSVVUG00000000874	-	100	66.189	ENSGACG00000002034	sfpq	55	66.189	Gasterosteus_aculeatus
ENSVVUG00000000874	-	100	88.889	ENSGGOG00000026354	SFPQ	100	88.889	Gorilla_gorilla
ENSVVUG00000000874	-	100	65.903	ENSHBUG00000016818	sfpq	50	65.330	Haplochromis_burtoni
ENSVVUG00000000874	-	100	88.136	ENSHGLG00000012001	SFPQ	51	88.136	Heterocephalus_glaber_female
ENSVVUG00000000874	-	100	88.889	ENSHGLG00100004136	-	100	88.889	Heterocephalus_glaber_male
ENSVVUG00000000874	-	100	67.630	ENSHCOG00000008612	sfpq	55	61.947	Hippocampus_comes
ENSVVUG00000000874	-	100	65.130	ENSIPUG00000013076	SFPQ	58	67.241	Ictalurus_punctatus
ENSVVUG00000000874	-	100	88.889	ENSSTOG00000014004	-	100	88.889	Ictidomys_tridecemlineatus
ENSVVUG00000000874	-	100	88.604	ENSJJAG00000015633	Sfpq	50	88.604	Jaculus_jaculus
ENSVVUG00000000874	-	100	64.888	ENSLACG00000014728	SFPQ	57	69.688	Latimeria_chalumnae
ENSVVUG00000000874	-	100	71.549	ENSLOCG00000001067	sfpq	50	72.238	Lepisosteus_oculatus
ENSVVUG00000000874	-	100	88.604	ENSLAFG00000015951	SFPQ	56	88.604	Loxodonta_africana
ENSVVUG00000000874	-	100	88.889	ENSMFAG00000000797	SFPQ	50	88.889	Macaca_fascicularis
ENSVVUG00000000874	-	100	88.889	ENSMMUG00000019154	SFPQ	50	88.889	Macaca_mulatta
ENSVVUG00000000874	-	100	88.889	ENSMNEG00000038895	SFPQ	50	88.889	Macaca_nemestrina
ENSVVUG00000000874	-	100	85.755	ENSMLEG00000010643	-	100	85.755	Mandrillus_leucophaeus
ENSVVUG00000000874	-	92	81.288	ENSMLEG00000035352	-	99	81.288	Mandrillus_leucophaeus
ENSVVUG00000000874	-	100	68.857	ENSMAMG00000007875	sfpq	53	68.571	Mastacembelus_armatus
ENSVVUG00000000874	-	100	65.903	ENSMZEG00005026091	sfpq	50	65.330	Maylandia_zebra
ENSVVUG00000000874	-	100	79.834	ENSMGAG00000004237	SFPQ	93	79.834	Meleagris_gallopavo
ENSVVUG00000000874	-	100	88.034	ENSMAUG00000006402	Sfpq	50	88.034	Mesocricetus_auratus
ENSVVUG00000000874	-	100	88.889	ENSMICG00000027265	SFPQ	50	88.889	Microcebus_murinus
ENSVVUG00000000874	-	100	83.761	ENSMOCG00000019075	Sfpq	72	83.761	Microtus_ochrogaster
ENSVVUG00000000874	-	100	65.043	ENSMMOG00000001074	sfpq	53	64.470	Mola_mola
ENSVVUG00000000874	-	100	86.040	ENSMODG00000017937	SFPQ	52	86.040	Monodelphis_domestica
ENSVVUG00000000874	-	100	65.903	ENSMALG00000010381	sfpq	52	64.756	Monopterus_albus
ENSVVUG00000000874	-	100	88.319	MGP_CAROLIEiJ_G0026487	Sfpq	50	88.319	Mus_caroli
ENSVVUG00000000874	-	100	88.319	ENSMUSG00000028820	Sfpq	50	88.319	Mus_musculus
ENSVVUG00000000874	-	100	88.319	MGP_PahariEiJ_G0028818	Sfpq	50	88.319	Mus_pahari
ENSVVUG00000000874	-	100	88.319	MGP_SPRETEiJ_G0027466	Sfpq	50	88.319	Mus_spretus
ENSVVUG00000000874	-	87	90.878	ENSMPUG00000014931	-	95	90.878	Mustela_putorius_furo
ENSVVUG00000000874	-	100	88.604	ENSMLUG00000027090	SFPQ	79	88.604	Myotis_lucifugus
ENSVVUG00000000874	-	100	88.604	ENSNGAG00000000888	Sfpq	50	88.604	Nannospalax_galili
ENSVVUG00000000874	-	100	66.189	ENSNBRG00000017479	sfpq	50	65.616	Neolamprologus_brichardi
ENSVVUG00000000874	-	100	88.889	ENSNLEG00000035521	-	100	88.889	Nomascus_leucogenys
ENSVVUG00000000874	-	100	85.470	ENSMEUG00000014082	SFPQ	50	84.900	Notamacropus_eugenii
ENSVVUG00000000874	-	100	88.889	ENSOPRG00000013696	SFPQ	50	88.889	Ochotona_princeps
ENSVVUG00000000874	-	96	78.221	ENSODEG00000005485	SFPQ	59	77.301	Octodon_degus
ENSVVUG00000000874	-	100	66.762	ENSONIG00000017737	sfpq	50	66.189	Oreochromis_niloticus
ENSVVUG00000000874	-	100	87.464	ENSOANG00000008789	-	100	87.464	Ornithorhynchus_anatinus
ENSVVUG00000000874	-	100	88.889	ENSOCUG00000001877	SFPQ	69	88.889	Oryctolagus_cuniculus
ENSVVUG00000000874	-	100	88.604	ENSOGAG00000027710	SFPQ	66	88.604	Otolemur_garnettii
ENSVVUG00000000874	-	100	88.889	ENSOARG00000019439	SFPQ	54	88.889	Ovis_aries
ENSVVUG00000000874	-	100	88.889	ENSPPAG00000030078	SFPQ	50	88.889	Pan_paniscus
ENSVVUG00000000874	-	100	88.636	ENSPPRG00000015478	-	100	88.352	Panthera_pardus
ENSVVUG00000000874	-	100	88.889	ENSPTIG00000007710	-	100	88.889	Panthera_tigris_altaica
ENSVVUG00000000874	-	100	88.889	ENSPANG00000005380	SFPQ	52	88.889	Papio_anubis
ENSVVUG00000000874	-	100	67.330	ENSPKIG00000023035	sfpq	59	69.859	Paramormyrops_kingsleyae
ENSVVUG00000000874	-	100	84.046	ENSPSIG00000011494	SFPQ	81	84.046	Pelodiscus_sinensis
ENSVVUG00000000874	-	100	88.319	ENSPEMG00000009794	Sfpq	72	88.319	Peromyscus_maniculatus_bairdii
ENSVVUG00000000874	-	70	67.635	ENSPMAG00000005583	sfpq	51	67.635	Petromyzon_marinus
ENSVVUG00000000874	-	100	85.755	ENSPCIG00000000923	SFPQ	50	85.185	Phascolarctos_cinereus
ENSVVUG00000000874	-	100	58.721	ENSPFOG00000003127	sfpq	57	60.174	Poecilia_formosa
ENSVVUG00000000874	-	100	88.889	ENSPPYG00000001560	SFPQ	50	88.889	Pongo_abelii
ENSVVUG00000000874	-	100	88.889	ENSPCOG00000027127	SFPQ	50	88.889	Propithecus_coquereli
ENSVVUG00000000874	-	100	87.429	ENSPVAG00000001865	SFPQ	50	87.429	Pteropus_vampyrus
ENSVVUG00000000874	-	100	61.345	ENSPNAG00000002128	sfpq	57	66.477	Pygocentrus_nattereri
ENSVVUG00000000874	-	100	88.319	ENSRNOG00000058461	Sfpq	50	88.319	Rattus_norvegicus
ENSVVUG00000000874	-	100	88.889	ENSRBIG00000035286	SFPQ	100	88.889	Rhinopithecus_bieti
ENSVVUG00000000874	-	100	88.889	ENSRROG00000040992	SFPQ	100	88.889	Rhinopithecus_roxellana
ENSVVUG00000000874	-	100	88.889	ENSSBOG00000024972	-	100	88.889	Saimiri_boliviensis_boliviensis
ENSVVUG00000000874	-	97	67.857	ENSSBOG00000033925	-	97	67.771	Saimiri_boliviensis_boliviensis
ENSVVUG00000000874	-	100	77.778	ENSSHAG00000016107	-	79	79.133	Sarcophilus_harrisii
ENSVVUG00000000874	-	100	82.621	ENSSHAG00000012312	-	100	82.051	Sarcophilus_harrisii
ENSVVUG00000000874	-	100	65.556	ENSSFOG00015009289	sfpq	63	70.739	Scleropages_formosus
ENSVVUG00000000874	-	100	68.195	ENSSMAG00000018201	sfpq	52	64.873	Scophthalmus_maximus
ENSVVUG00000000874	-	100	67.335	ENSSDUG00000008402	sfpq	52	69.714	Seriola_dumerili
ENSVVUG00000000874	-	100	67.335	ENSSLDG00000018917	sfpq	52	69.714	Seriola_lalandi_dorsalis
ENSVVUG00000000874	-	100	88.889	ENSSARG00000006409	SFPQ	95	88.889	Sorex_araneus
ENSVVUG00000000874	-	100	66.286	ENSSPAG00000016550	sfpq	50	67.429	Stegastes_partitus
ENSVVUG00000000874	-	100	88.889	ENSSSCG00000035690	SFPQ	50	88.889	Sus_scrofa
ENSVVUG00000000874	-	100	83.761	ENSTGUG00000001722	SFPQ	81	83.761	Taeniopygia_guttata
ENSVVUG00000000874	-	100	67.049	ENSTRUG00000003783	sfpq	50	68.986	Takifugu_rubripes
ENSVVUG00000000874	-	100	69.143	ENSTNIG00000011331	sfpq	57	69.364	Tetraodon_nigroviridis
ENSVVUG00000000874	-	100	84.046	ENSTTRG00000013930	SFPQ	50	84.046	Tursiops_truncatus
ENSVVUG00000000874	-	67	99.160	ENSUAMG00000026758	SFPQ	53	99.160	Ursus_americanus
ENSVVUG00000000874	-	100	86.040	ENSUMAG00000008056	-	100	86.040	Ursus_maritimus
ENSVVUG00000000874	-	100	73.389	ENSXETG00000009682	sfpq	92	78.041	Xenopus_tropicalis