EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000002339 (Gene tree)
Gene ID: -
Gene Symbol: LRPPRC
Alias: GP130|LRP130|LSFC
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 109192 bases
Position: chrNBDQ01000011.1:10786185-10895376
Accession: 15714
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000006678	PPR	PF01535.20	5.6e-32	1	6
ENSVVUP00000006678	PPR	PF01535.20	5.6e-32	2	6
ENSVVUP00000006678	PPR	PF01535.20	5.6e-32	3	6
ENSVVUP00000006678	PPR	PF01535.20	5.6e-32	4	6
ENSVVUP00000006678	PPR	PF01535.20	5.6e-32	5	6
ENSVVUP00000006678	PPR	PF01535.20	5.6e-32	6	6
ENSVVUP00000006050	PPR	PF01535.20	6.9e-32	1	6
ENSVVUP00000006050	PPR	PF01535.20	6.9e-32	2	6
ENSVVUP00000006050	PPR	PF01535.20	6.9e-32	3	6
ENSVVUP00000006050	PPR	PF01535.20	6.9e-32	4	6
ENSVVUP00000006050	PPR	PF01535.20	6.9e-32	5	6
ENSVVUP00000006050	PPR	PF01535.20	6.9e-32	6	6
ENSVVUP00000006616	PPR	PF01535.20	7.9e-32	1	6
ENSVVUP00000006616	PPR	PF01535.20	7.9e-32	2	6
ENSVVUP00000006616	PPR	PF01535.20	7.9e-32	3	6
ENSVVUP00000006616	PPR	PF01535.20	7.9e-32	4	6
ENSVVUP00000006616	PPR	PF01535.20	7.9e-32	5	6
ENSVVUP00000006616	PPR	PF01535.20	7.9e-32	6	6
ENSVVUP00000006501	PPR	PF01535.20	1.1e-31	1	6
ENSVVUP00000006501	PPR	PF01535.20	1.1e-31	2	6
ENSVVUP00000006501	PPR	PF01535.20	1.1e-31	3	6
ENSVVUP00000006501	PPR	PF01535.20	1.1e-31	4	6
ENSVVUP00000006501	PPR	PF01535.20	1.1e-31	5	6
ENSVVUP00000006501	PPR	PF01535.20	1.1e-31	6	6
ENSVVUP00000006565	PPR	PF01535.20	1.3e-31	1	6
ENSVVUP00000006565	PPR	PF01535.20	1.3e-31	2	6
ENSVVUP00000006565	PPR	PF01535.20	1.3e-31	3	6
ENSVVUP00000006565	PPR	PF01535.20	1.3e-31	4	6
ENSVVUP00000006565	PPR	PF01535.20	1.3e-31	5	6
ENSVVUP00000006565	PPR	PF01535.20	1.3e-31	6	6
ENSVVUP00000006541	PPR	PF01535.20	1.6e-31	1	6
ENSVVUP00000006541	PPR	PF01535.20	1.6e-31	2	6
ENSVVUP00000006541	PPR	PF01535.20	1.6e-31	3	6
ENSVVUP00000006541	PPR	PF01535.20	1.6e-31	4	6
ENSVVUP00000006541	PPR	PF01535.20	1.6e-31	5	6
ENSVVUP00000006541	PPR	PF01535.20	1.6e-31	6	6
ENSVVUP00000006588	PPR	PF01535.20	1.6e-31	1	6
ENSVVUP00000006588	PPR	PF01535.20	1.6e-31	2	6
ENSVVUP00000006588	PPR	PF01535.20	1.6e-31	3	6
ENSVVUP00000006588	PPR	PF01535.20	1.6e-31	4	6
ENSVVUP00000006588	PPR	PF01535.20	1.6e-31	5	6
ENSVVUP00000006588	PPR	PF01535.20	1.6e-31	6	6
ENSVVUP00000006547	PPR	PF01535.20	2e-31	1	6
ENSVVUP00000006547	PPR	PF01535.20	2e-31	2	6
ENSVVUP00000006547	PPR	PF01535.20	2e-31	3	6
ENSVVUP00000006547	PPR	PF01535.20	2e-31	4	6
ENSVVUP00000006547	PPR	PF01535.20	2e-31	5	6
ENSVVUP00000006547	PPR	PF01535.20	2e-31	6	6
ENSVVUP00000005802	PPR	PF01535.20	3e-30	1	6
ENSVVUP00000005802	PPR	PF01535.20	3e-30	2	6
ENSVVUP00000005802	PPR	PF01535.20	3e-30	3	6
ENSVVUP00000005802	PPR	PF01535.20	3e-30	4	6
ENSVVUP00000005802	PPR	PF01535.20	3e-30	5	6
ENSVVUP00000005802	PPR	PF01535.20	3e-30	6	6
ENSVVUP00000006551	PPR	PF01535.20	4e-30	1	6
ENSVVUP00000006551	PPR	PF01535.20	4e-30	2	6
ENSVVUP00000006551	PPR	PF01535.20	4e-30	3	6
ENSVVUP00000006551	PPR	PF01535.20	4e-30	4	6
ENSVVUP00000006551	PPR	PF01535.20	4e-30	5	6
ENSVVUP00000006551	PPR	PF01535.20	4e-30	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000008745	LRPPRC-206	4104	-	ENSVVUP00000006551	1367 (aa)	-	-
ENSVVUT00000008102	LRPPRC-202	3894	-	ENSVVUP00000006050	1297 (aa)	-	-
ENSVVUT00000008738	LRPPRC-205	4122	-	ENSVVUP00000006547	1373 (aa)	-	-
ENSVVUT00000008763	LRPPRC-207	4098	-	ENSVVUP00000006565	1365 (aa)	-	-
ENSVVUT00000007785	LRPPRC-201	4035	-	ENSVVUP00000005802	1344 (aa)	-	-
ENSVVUT00000008727	LRPPRC-204	4152	-	ENSVVUP00000006541	1383 (aa)	-	-
ENSVVUT00000008821	LRPPRC-209	4068	-	ENSVVUP00000006616	1355 (aa)	-	-
ENSVVUT00000008786	LRPPRC-208	4155	-	ENSVVUP00000006588	1384 (aa)	-	-
ENSVVUT00000008677	LRPPRC-203	4194	-	ENSVVUP00000006501	1397 (aa)	-	-
ENSVVUT00000008896	LRPPRC-210	3933	-	ENSVVUP00000006678	1310 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000002339's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000002339's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000002339	LRPPRC	99	78.879	ENSG00000138095	LRPPRC	99	81.214	Homo_sapiens
ENSVVUG00000002339	LRPPRC	97	57.628	ENSAPLG00000008902	LRPPRC	100	57.859	Anas_platyrhynchos
ENSVVUG00000002339	LRPPRC	100	83.572	ENSBTAG00000016368	LRPPRC	100	83.572	Bos_taurus
ENSVVUG00000002339	LRPPRC	100	97.128	ENSCAFG00000002527	LRPPRC	100	97.128	Canis_familiaris
ENSVVUG00000002339	LRPPRC	100	98.282	ENSCAFG00020025995	LRPPRC	100	98.282	Canis_lupus_dingo
ENSVVUG00000002339	LRPPRC	99	82.370	ENSTSYG00000013197	LRPPRC	96	82.576	Carlito_syrichta
ENSVVUG00000002339	LRPPRC	99	63.549	ENSCPBG00000005446	LRPPRC	99	65.369	Chrysemys_picta_bellii
ENSVVUG00000002339	LRPPRC	80	31.798	FBgn0284256	bsf	78	31.871	Drosophila_melanogaster
ENSVVUG00000002339	LRPPRC	100	86.863	ENSEASG00005003715	LRPPRC	100	86.863	Equus_asinus_asinus
ENSVVUG00000002339	LRPPRC	99	86.454	ENSECAG00000023814	LRPPRC	95	86.217	Equus_caballus
ENSVVUG00000002339	LRPPRC	99	56.287	ENSGALG00000009967	LRPPRC	98	56.012	Gallus_gallus
ENSVVUG00000002339	LRPPRC	99	63.918	ENSGAGG00000020227	LRPPRC	98	62.915	Gopherus_agassizii
ENSVVUG00000002339	LRPPRC	99	80.014	ENSMLEG00000043673	LRPPRC	99	82.922	Mandrillus_leucophaeus
ENSVVUG00000002339	LRPPRC	98	56.963	ENSMGAG00000010201	LRPPRC	99	57.068	Meleagris_gallopavo
ENSVVUG00000002339	LRPPRC	99	74.803	MGP_CAROLIEiJ_G0021927	Lrpprc	99	75.018	Mus_caroli
ENSVVUG00000002339	LRPPRC	99	75.668	ENSMUSG00000024120	Lrpprc	99	75.305	Mus_musculus
ENSVVUG00000002339	LRPPRC	99	76.056	MGP_PahariEiJ_G0020917	Lrpprc	99	75.808	Mus_pahari
ENSVVUG00000002339	LRPPRC	99	75.612	MGP_SPRETEiJ_G0022843	Lrpprc	99	75.449	Mus_spretus
ENSVVUG00000002339	LRPPRC	88	55.191	ENSMEUG00000004430	-	94	55.191	Notamacropus_eugenii
ENSVVUG00000002339	LRPPRC	99	78.163	ENSPEMG00000022720	Lrpprc	99	78.236	Peromyscus_maniculatus_bairdii
ENSVVUG00000002339	LRPPRC	99	68.117	ENSPCIG00000006872	LRPPRC	99	67.832	Phascolarctos_cinereus
ENSVVUG00000002339	LRPPRC	100	83.550	ENSPCOG00000001309	LRPPRC	99	86.174	Propithecus_coquereli
ENSVVUG00000002339	LRPPRC	92	60.143	ENSSPUG00000005188	LRPPRC	99	60.320	Sphenodon_punctatus
ENSVVUG00000002339	LRPPRC	67	83.710	ENSTBEG00000011055	-	66	83.710	Tupaia_belangeri
ENSVVUG00000002339	LRPPRC	99	88.379	ENSUAMG00000022940	LRPPRC	99	88.379	Ursus_americanus
ENSVVUG00000002339	LRPPRC	99	88.164	ENSUMAG00000012801	LRPPRC	99	88.805	Ursus_maritimus