EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000002476 (Gene tree)
Gene ID: -
Gene Symbol: PRPF4
Alias: HPRP4|HPRP4P|PRP4|Prp4p|SNRNP60
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 16582 bases
Position: chrNBDQ01000043.1:7140693-7157274
Accession: 112923074
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000004113	PRP4	PF08799.11	6.6e-14	1	1
ENSVVUP00000004091	PRP4	PF08799.11	6.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000005632	PRPF4-202	1524	-	ENSVVUP00000004113	507 (aa)	-	-
ENSVVUT00000005605	PRPF4-201	1578	-	ENSVVUP00000004091	525 (aa)	XP_025858579	UPI000DF6CE31

Gene Model

Click here to download ENSVVUG00000002476's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000002476's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000002476	PRPF4	100	98.286	ENSG00000136875	PRPF4	100	98.286	Homo_sapiens
ENSVVUG00000002476	PRPF4	99	76.715	ENSAPOG00000014132	prpf4	98	76.556	Acanthochromis_polyacanthus
ENSVVUG00000002476	PRPF4	100	98.476	ENSAMEG00000013048	PRPF4	98	98.476	Ailuropoda_melanoleuca
ENSVVUG00000002476	PRPF4	99	76.529	ENSACIG00000005579	prpf4	99	76.529	Amphilophus_citrinellus
ENSVVUG00000002476	PRPF4	99	75.835	ENSAOCG00000005457	prpf4	99	76.031	Amphiprion_ocellaris
ENSVVUG00000002476	PRPF4	99	75.639	ENSAPEG00000000776	prpf4	99	75.835	Amphiprion_percula
ENSVVUG00000002476	PRPF4	99	75.937	ENSATEG00000023013	prpf4	99	75.937	Anabas_testudineus
ENSVVUG00000002476	PRPF4	99	90.495	ENSAPLG00000006534	PRPF4	97	88.190	Anas_platyrhynchos
ENSVVUG00000002476	PRPF4	99	90.335	ENSACAG00000015110	PRPF4	100	88.805	Anolis_carolinensis
ENSVVUG00000002476	PRPF4	100	98.667	ENSANAG00000022464	PRPF4	96	98.667	Aotus_nancymaae
ENSVVUG00000002476	PRPF4	99	75.984	ENSACLG00000019031	prpf4	99	76.181	Astatotilapia_calliptera
ENSVVUG00000002476	PRPF4	99	61.996	ENSAMXG00000006756	prpf4	99	73.069	Astyanax_mexicanus
ENSVVUG00000002476	PRPF4	100	97.830	ENSBTAG00000004571	PRPF4	100	97.714	Bos_taurus
ENSVVUG00000002476	PRPF4	94	43.633	WBGene00007972	prp-4	96	43.633	Caenorhabditis_elegans
ENSVVUG00000002476	PRPF4	100	98.479	ENSCJAG00000017856	PRPF4	100	98.479	Callithrix_jacchus
ENSVVUG00000002476	PRPF4	100	98.857	ENSCAFG00000003224	PRPF4	97	98.857	Canis_familiaris
ENSVVUG00000002476	PRPF4	100	98.857	ENSCAFG00020022637	PRPF4	100	98.857	Canis_lupus_dingo
ENSVVUG00000002476	PRPF4	100	98.028	ENSCHIG00000024648	-	100	97.909	Capra_hircus
ENSVVUG00000002476	PRPF4	100	98.286	ENSTSYG00000010366	PRPF4	100	98.286	Carlito_syrichta
ENSVVUG00000002476	PRPF4	90	89.398	ENSCAPG00000008935	PRPF4	97	88.180	Cavia_aperea
ENSVVUG00000002476	PRPF4	100	97.905	ENSCPOG00000010747	-	100	97.905	Cavia_porcellus
ENSVVUG00000002476	PRPF4	100	91.519	ENSCPOG00000014729	-	100	91.429	Cavia_porcellus
ENSVVUG00000002476	PRPF4	100	98.476	ENSCCAG00000028990	PRPF4	100	98.476	Cebus_capucinus
ENSVVUG00000002476	PRPF4	100	98.422	ENSCATG00000021552	PRPF4	100	98.286	Cercocebus_atys
ENSVVUG00000002476	PRPF4	100	98.095	ENSCLAG00000013448	PRPF4	100	98.095	Chinchilla_lanigera
ENSVVUG00000002476	PRPF4	90	94.518	ENSCHOG00000007233	PRPF4	100	94.518	Choloepus_hoffmanni
ENSVVUG00000002476	PRPF4	99	91.683	ENSCPBG00000019136	PRPF4	74	90.698	Chrysemys_picta_bellii
ENSVVUG00000002476	PRPF4	98	59.481	ENSCING00000001299	-	97	58.153	Ciona_intestinalis
ENSVVUG00000002476	PRPF4	99	57.087	ENSCSAVG00000009178	-	99	58.369	Ciona_savignyi
ENSVVUG00000002476	PRPF4	100	98.476	ENSCANG00000003246	PRPF4	100	98.476	Colobus_angolensis_palliatus
ENSVVUG00000002476	PRPF4	100	98.286	ENSCGRG00001016992	Prpf4	100	98.286	Cricetulus_griseus_chok1gshd
ENSVVUG00000002476	PRPF4	100	98.286	ENSCGRG00000017560	Prpf4	100	98.286	Cricetulus_griseus_crigri
ENSVVUG00000002476	PRPF4	99	75.296	ENSCSEG00000020451	prpf4	99	75.296	Cynoglossus_semilaevis
ENSVVUG00000002476	PRPF4	99	79.604	ENSDARG00000067639	prpf4	99	79.604	Danio_rerio
ENSVVUG00000002476	PRPF4	100	97.909	ENSDNOG00000013203	PRPF4	100	97.909	Dasypus_novemcinctus
ENSVVUG00000002476	PRPF4	100	98.286	ENSDORG00000026275	Prpf4	100	98.286	Dipodomys_ordii
ENSVVUG00000002476	PRPF4	90	55.748	FBgn0036733	U4-U6-60K	99	49.819	Drosophila_melanogaster
ENSVVUG00000002476	PRPF4	100	96.647	ENSETEG00000020389	PRPF4	100	96.205	Echinops_telfairi
ENSVVUG00000002476	PRPF4	99	71.918	ENSEBUG00000015229	prpf4	86	72.374	Eptatretus_burgeri
ENSVVUG00000002476	PRPF4	100	98.667	ENSEASG00005022678	PRPF4	100	98.667	Equus_asinus_asinus
ENSVVUG00000002476	PRPF4	100	98.667	ENSECAG00000007072	PRPF4	100	98.667	Equus_caballus
ENSVVUG00000002476	PRPF4	100	76.129	ENSEEUG00000007480	PRPF4	100	76.129	Erinaceus_europaeus
ENSVVUG00000002476	PRPF4	99	80.396	ENSELUG00000007510	prpf4	99	80.396	Esox_lucius
ENSVVUG00000002476	PRPF4	100	98.479	ENSFCAG00000005514	PRPF4	100	98.479	Felis_catus
ENSVVUG00000002476	PRPF4	99	88.209	ENSFALG00000005423	PRPF4	90	84.435	Ficedula_albicollis
ENSVVUG00000002476	PRPF4	100	97.905	ENSFDAG00000005839	PRPF4	100	97.905	Fukomys_damarensis
ENSVVUG00000002476	PRPF4	99	75.394	ENSFHEG00000001300	prpf4	99	75.394	Fundulus_heteroclitus
ENSVVUG00000002476	PRPF4	99	90.297	ENSGALG00000008857	PRPF4	96	88.462	Gallus_gallus
ENSVVUG00000002476	PRPF4	64	72.393	ENSGAFG00000012164	prpf4	70	70.058	Gambusia_affinis
ENSVVUG00000002476	PRPF4	99	68.898	ENSGACG00000015476	prpf4	99	68.110	Gasterosteus_aculeatus
ENSVVUG00000002476	PRPF4	99	91.485	ENSGAGG00000025029	PRPF4	95	90.504	Gopherus_agassizii
ENSVVUG00000002476	PRPF4	100	98.286	ENSGGOG00000006943	PRPF4	100	98.286	Gorilla_gorilla
ENSVVUG00000002476	PRPF4	99	75.787	ENSHBUG00000000562	prpf4	99	75.984	Haplochromis_burtoni
ENSVVUG00000002476	PRPF4	100	81.594	ENSHGLG00000016628	-	100	81.594	Heterocephalus_glaber_female
ENSVVUG00000002476	PRPF4	100	97.905	ENSHGLG00000015191	PRPF4	100	97.905	Heterocephalus_glaber_female
ENSVVUG00000002476	PRPF4	100	79.810	ENSHGLG00000003838	-	100	79.810	Heterocephalus_glaber_female
ENSVVUG00000002476	PRPF4	100	79.810	ENSHGLG00100005571	-	100	79.810	Heterocephalus_glaber_male
ENSVVUG00000002476	PRPF4	99	78.416	ENSIPUG00000017956	PRPF4	99	78.416	Ictalurus_punctatus
ENSVVUG00000002476	PRPF4	100	98.095	ENSSTOG00000027833	PRPF4	100	98.095	Ictidomys_tridecemlineatus
ENSVVUG00000002476	PRPF4	100	98.286	ENSJJAG00000008838	Prpf4	100	98.286	Jaculus_jaculus
ENSVVUG00000002476	PRPF4	99	75.542	ENSKMAG00000013236	prpf4	99	75.542	Kryptolebias_marmoratus
ENSVVUG00000002476	PRPF4	99	75.248	ENSLBEG00000020611	prpf4	99	75.248	Labrus_bergylta
ENSVVUG00000002476	PRPF4	99	81.423	ENSLACG00000016317	PRPF4	99	79.732	Latimeria_chalumnae
ENSVVUG00000002476	PRPF4	99	81.548	ENSLOCG00000000581	prpf4	99	81.548	Lepisosteus_oculatus
ENSVVUG00000002476	PRPF4	100	98.422	ENSLAFG00000018225	PRPF4	100	97.909	Loxodonta_africana
ENSVVUG00000002476	PRPF4	100	98.225	ENSMFAG00000039397	PRPF4	100	98.095	Macaca_fascicularis
ENSVVUG00000002476	PRPF4	100	98.422	ENSMMUG00000005844	PRPF4	100	98.286	Macaca_mulatta
ENSVVUG00000002476	PRPF4	100	87.810	ENSMNEG00000033737	PRPF4	100	87.810	Macaca_nemestrina
ENSVVUG00000002476	PRPF4	100	98.422	ENSMLEG00000040284	PRPF4	100	98.286	Mandrillus_leucophaeus
ENSVVUG00000002476	PRPF4	99	75.740	ENSMAMG00000020141	prpf4	99	75.740	Mastacembelus_armatus
ENSVVUG00000002476	PRPF4	99	75.984	ENSMZEG00005023205	prpf4	99	76.181	Maylandia_zebra
ENSVVUG00000002476	PRPF4	99	89.703	ENSMGAG00000001796	PRPF4	97	87.405	Meleagris_gallopavo
ENSVVUG00000002476	PRPF4	100	97.714	ENSMAUG00000018022	Prpf4	100	97.714	Mesocricetus_auratus
ENSVVUG00000002476	PRPF4	100	97.633	ENSMICG00000015022	PRPF4	100	97.338	Microcebus_murinus
ENSVVUG00000002476	PRPF4	100	97.714	ENSMOCG00000018273	Prpf4	100	97.714	Microtus_ochrogaster
ENSVVUG00000002476	PRPF4	99	74.455	ENSMMOG00000021177	prpf4	99	74.455	Mola_mola
ENSVVUG00000002476	PRPF4	99	95.248	ENSMODG00000004444	-	100	93.738	Monodelphis_domestica
ENSVVUG00000002476	PRPF4	99	95.446	ENSMODG00000025096	-	97	93.928	Monodelphis_domestica
ENSVVUG00000002476	PRPF4	99	75.937	ENSMALG00000013624	prpf4	99	75.937	Monopterus_albus
ENSVVUG00000002476	PRPF4	100	98.095	MGP_CAROLIEiJ_G0026078	Prpf4	100	98.095	Mus_caroli
ENSVVUG00000002476	PRPF4	100	98.095	ENSMUSG00000066148	Prpf4	100	98.095	Mus_musculus
ENSVVUG00000002476	PRPF4	100	97.905	MGP_PahariEiJ_G0028413	Prpf4	100	97.905	Mus_pahari
ENSVVUG00000002476	PRPF4	100	98.095	MGP_SPRETEiJ_G0027042	Prpf4	100	98.095	Mus_spretus
ENSVVUG00000002476	PRPF4	100	98.476	ENSMPUG00000007883	PRPF4	100	98.476	Mustela_putorius_furo
ENSVVUG00000002476	PRPF4	100	96.252	ENSMLUG00000008626	-	97	96.190	Myotis_lucifugus
ENSVVUG00000002476	PRPF4	100	98.095	ENSMLUG00000015309	-	97	98.095	Myotis_lucifugus
ENSVVUG00000002476	PRPF4	100	92.952	ENSNGAG00000000468	Prpf4	100	92.952	Nannospalax_galili
ENSVVUG00000002476	PRPF4	99	76.181	ENSNBRG00000007972	prpf4	99	76.378	Neolamprologus_brichardi
ENSVVUG00000002476	PRPF4	100	98.667	ENSNLEG00000016647	PRPF4	100	98.667	Nomascus_leucogenys
ENSVVUG00000002476	PRPF4	99	95.644	ENSMEUG00000013256	PRPF4	100	94.015	Notamacropus_eugenii
ENSVVUG00000002476	PRPF4	100	97.719	ENSOPRG00000005302	PRPF4	100	97.719	Ochotona_princeps
ENSVVUG00000002476	PRPF4	100	98.286	ENSODEG00000018147	PRPF4	100	98.286	Octodon_degus
ENSVVUG00000002476	PRPF4	99	75.984	ENSONIG00000012671	prpf4	99	76.181	Oreochromis_niloticus
ENSVVUG00000002476	PRPF4	100	98.476	ENSOCUG00000005046	PRPF4	100	98.476	Oryctolagus_cuniculus
ENSVVUG00000002476	PRPF4	99	74.405	ENSORLG00000019641	prpf4	99	74.111	Oryzias_latipes
ENSVVUG00000002476	PRPF4	99	74.405	ENSORLG00020019438	prpf4	99	74.111	Oryzias_latipes_hni
ENSVVUG00000002476	PRPF4	99	74.059	ENSOMEG00000020941	prpf4	99	73.904	Oryzias_melastigma
ENSVVUG00000002476	PRPF4	100	93.524	ENSOGAG00000007802	PRPF4	98	93.524	Otolemur_garnettii
ENSVVUG00000002476	PRPF4	100	98.095	ENSOARG00000006319	PRPF4	97	98.095	Ovis_aries
ENSVVUG00000002476	PRPF4	100	98.286	ENSPPAG00000041797	PRPF4	100	98.286	Pan_paniscus
ENSVVUG00000002476	PRPF4	100	98.667	ENSPPRG00000014360	PRPF4	100	98.667	Panthera_pardus
ENSVVUG00000002476	PRPF4	100	98.667	ENSPTIG00000009574	PRPF4	100	98.667	Panthera_tigris_altaica
ENSVVUG00000002476	PRPF4	100	98.286	ENSPTRG00000021274	PRPF4	100	98.099	Pan_troglodytes
ENSVVUG00000002476	PRPF4	100	98.225	ENSPANG00000025776	PRPF4	96	98.095	Papio_anubis
ENSVVUG00000002476	PRPF4	99	80.952	ENSPKIG00000017259	prpf4	99	80.952	Paramormyrops_kingsleyae
ENSVVUG00000002476	PRPF4	99	91.287	ENSPSIG00000010713	PRPF4	91	89.272	Pelodiscus_sinensis
ENSVVUG00000002476	PRPF4	99	58.801	ENSPMGG00000000997	prpf4	99	58.228	Periophthalmus_magnuspinnatus
ENSVVUG00000002476	PRPF4	100	98.286	ENSPEMG00000024115	Prpf4	100	98.286	Peromyscus_maniculatus_bairdii
ENSVVUG00000002476	PRPF4	99	95.644	ENSPCIG00000003821	PRPF4	99	94.015	Phascolarctos_cinereus
ENSVVUG00000002476	PRPF4	99	69.276	ENSPFOG00000013524	prpf4	98	71.779	Poecilia_formosa
ENSVVUG00000002476	PRPF4	85	70.859	ENSPLAG00000011620	prpf4	96	70.859	Poecilia_latipinna
ENSVVUG00000002476	PRPF4	95	72.917	ENSPMEG00000006813	prpf4	98	72.917	Poecilia_mexicana
ENSVVUG00000002476	PRPF4	100	98.028	ENSPCAG00000002561	PRPF4	99	98.259	Procavia_capensis
ENSVVUG00000002476	PRPF4	100	98.095	ENSPCOG00000011975	PRPF4	100	98.095	Propithecus_coquereli
ENSVVUG00000002476	PRPF4	100	94.677	ENSPVAG00000004708	PRPF4	100	94.677	Pteropus_vampyrus
ENSVVUG00000002476	PRPF4	99	75.984	ENSPNYG00000008013	prpf4	99	76.181	Pundamilia_nyererei
ENSVVUG00000002476	PRPF4	99	80.000	ENSPNAG00000000697	prpf4	99	80.000	Pygocentrus_nattereri
ENSVVUG00000002476	PRPF4	100	97.905	ENSRNOG00000014777	Prpf4	100	97.905	Rattus_norvegicus
ENSVVUG00000002476	PRPF4	100	98.476	ENSRBIG00000040221	PRPF4	100	98.476	Rhinopithecus_bieti
ENSVVUG00000002476	PRPF4	100	98.476	ENSRROG00000040240	PRPF4	100	98.476	Rhinopithecus_roxellana
ENSVVUG00000002476	PRPF4	99	95.842	ENSSHAG00000017658	PRPF4	100	94.307	Sarcophilus_harrisii
ENSVVUG00000002476	PRPF4	99	81.746	ENSSFOG00015008963	prpf4	99	81.746	Scleropages_formosus
ENSVVUG00000002476	PRPF4	99	74.951	ENSSMAG00000008889	prpf4	99	74.951	Scophthalmus_maximus
ENSVVUG00000002476	PRPF4	99	73.016	ENSSDUG00000022083	prpf4	98	72.925	Seriola_dumerili
ENSVVUG00000002476	PRPF4	99	73.069	ENSSLDG00000008115	prpf4	98	73.123	Seriola_lalandi_dorsalis
ENSVVUG00000002476	PRPF4	99	90.891	ENSSPUG00000015582	PRPF4	100	89.524	Sphenodon_punctatus
ENSVVUG00000002476	PRPF4	99	70.588	ENSSPAG00000011286	prpf4	99	70.588	Stegastes_partitus
ENSVVUG00000002476	PRPF4	100	98.667	ENSSSCG00000024648	PRPF4	100	98.667	Sus_scrofa
ENSVVUG00000002476	PRPF4	99	88.492	ENSTGUG00000002623	PRPF4	100	89.655	Taeniopygia_guttata
ENSVVUG00000002476	PRPF4	99	74.951	ENSTRUG00000008853	prpf4	99	74.951	Takifugu_rubripes
ENSVVUG00000002476	PRPF4	99	74.308	ENSTNIG00000013250	prpf4	99	74.308	Tetraodon_nigroviridis
ENSVVUG00000002476	PRPF4	100	90.114	ENSTBEG00000000821	PRPF4	100	90.114	Tupaia_belangeri
ENSVVUG00000002476	PRPF4	85	98.837	ENSTTRG00000003246	PRPF4	85	98.837	Tursiops_truncatus
ENSVVUG00000002476	PRPF4	64	94.675	ENSUAMG00000018288	PRPF4	90	94.675	Ursus_americanus
ENSVVUG00000002476	PRPF4	100	97.830	ENSUMAG00000019375	PRPF4	100	97.714	Ursus_maritimus
ENSVVUG00000002476	PRPF4	100	97.909	ENSVPAG00000005281	PRPF4	100	97.909	Vicugna_pacos
ENSVVUG00000002476	PRPF4	72	57.143	ENSXCOG00000006101	prpf4	93	58.537	Xiphophorus_couchianus
ENSVVUG00000002476	PRPF4	91	63.636	ENSXMAG00000002750	prpf4	98	64.694	Xiphophorus_maculatus