EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000002504 (Gene tree)
Gene ID: -
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 98974 bases
Position: chrNBDQ01000106.1:1912955-2011928
Accession: 112931973
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000003238	DND1_DSRM	PF14709.7	1.6e-24	1	1
ENSVVUP00000003253	DND1_DSRM	PF14709.7	1.8e-24	1	1
ENSVVUP00000003238	RRM_1	PF00076.22	2.6e-40	1	3
ENSVVUP00000003238	RRM_1	PF00076.22	2.6e-40	2	3
ENSVVUP00000003238	RRM_1	PF00076.22	2.6e-40	3	3
ENSVVUP00000003253	RRM_1	PF00076.22	3.5e-40	1	3
ENSVVUP00000003253	RRM_1	PF00076.22	3.5e-40	2	3
ENSVVUP00000003253	RRM_1	PF00076.22	3.5e-40	3	3
ENSVVUP00000003277	RRM_1	PF00076.22	6.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000004424	A1CF-201	1815	-	ENSVVUP00000003238	539 (aa)	-	-
ENSVVUT00000004477	A1CF-203	1488	-	ENSVVUP00000003277	167 (aa)	-	-
ENSVVUT00000004445	A1CF-202	1794	XM_026014793	ENSVVUP00000003253	582 (aa)	XP_025870578	UPI000DF6AE27

Gene Model

Click here to download ENSVVUG00000002504's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000002504's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000002504	A1CF	64	57.273	ENSVVUG00000019744	SYNCRIP	72	45.477
ENSVVUG00000002504	A1CF	80	58.824	ENSVVUG00000014774	RBM47	73	58.036
ENSVVUG00000002504	A1CF	67	52.679	ENSVVUG00000013559	DND1	75	35.294
ENSVVUG00000002504	A1CF	79	71.667	ENSVVUG00000024957	RBM46	85	71.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000002504	A1CF	100	95.222	ENSG00000148584	A1CF	100	97.015	Homo_sapiens
ENSVVUG00000002504	A1CF	100	74.324	ENSAPOG00000008259	a1cf	100	74.493	Acanthochromis_polyacanthus
ENSVVUG00000002504	A1CF	100	96.284	ENSAMEG00000000523	A1CF	100	96.284	Ailuropoda_melanoleuca
ENSVVUG00000002504	A1CF	100	76.694	ENSACIG00000008632	a1cf	100	77.686	Amphilophus_citrinellus
ENSVVUG00000002504	A1CF	100	74.667	ENSAOCG00000023744	a1cf	96	83.188	Amphiprion_ocellaris
ENSVVUG00000002504	A1CF	100	73.520	ENSAPEG00000009537	a1cf	100	74.507	Amphiprion_percula
ENSVVUG00000002504	A1CF	53	85.393	ENSATEG00000013677	-	82	84.444	Anabas_testudineus
ENSVVUG00000002504	A1CF	100	76.568	ENSATEG00000013720	a1cf	100	77.907	Anabas_testudineus
ENSVVUG00000002504	A1CF	99	89.668	ENSAPLG00000002964	A1CF	100	87.669	Anas_platyrhynchos
ENSVVUG00000002504	A1CF	99	86.704	ENSACAG00000015269	A1CF	100	84.589	Anolis_carolinensis
ENSVVUG00000002504	A1CF	100	95.563	ENSANAG00000019974	A1CF	100	95.222	Aotus_nancymaae
ENSVVUG00000002504	A1CF	97	77.840	ENSACLG00000017428	a1cf	100	77.000	Astatotilapia_calliptera
ENSVVUG00000002504	A1CF	100	73.223	ENSAMXG00000018180	a1cf	100	73.223	Astyanax_mexicanus
ENSVVUG00000002504	A1CF	100	95.400	ENSBTAG00000021195	A1CF	100	96.283	Bos_taurus
ENSVVUG00000002504	A1CF	100	94.613	ENSCJAG00000005045	A1CF	100	94.613	Callithrix_jacchus
ENSVVUG00000002504	A1CF	100	98.475	ENSCAFG00000015581	A1CF	100	98.475	Canis_familiaris
ENSVVUG00000002504	A1CF	100	98.475	ENSCAFG00020026421	A1CF	100	98.475	Canis_lupus_dingo
ENSVVUG00000002504	A1CF	99	94.312	ENSCHIG00000020411	A1CF	100	93.277	Capra_hircus
ENSVVUG00000002504	A1CF	94	94.555	ENSTSYG00000001755	A1CF	100	94.737	Carlito_syrichta
ENSVVUG00000002504	A1CF	100	81.288	ENSCAPG00000017386	A1CF	100	81.288	Cavia_aperea
ENSVVUG00000002504	A1CF	100	92.761	ENSCPOG00000009807	A1CF	100	92.593	Cavia_porcellus
ENSVVUG00000002504	A1CF	100	94.604	ENSCCAG00000018168	A1CF	100	94.604	Cebus_capucinus
ENSVVUG00000002504	A1CF	100	95.548	ENSCATG00000043715	A1CF	100	95.377	Cercocebus_atys
ENSVVUG00000002504	A1CF	100	92.785	ENSCLAG00000010424	A1CF	100	92.617	Chinchilla_lanigera
ENSVVUG00000002504	A1CF	100	94.088	ENSCSAG00000007032	A1CF	100	93.919	Chlorocebus_sabaeus
ENSVVUG00000002504	A1CF	98	90.550	ENSCHOG00000009089	A1CF	98	90.550	Choloepus_hoffmanni
ENSVVUG00000002504	A1CF	99	88.645	ENSCPBG00000026464	A1CF	100	87.500	Chrysemys_picta_bellii
ENSVVUG00000002504	A1CF	100	94.257	ENSCANG00000038032	A1CF	100	94.088	Colobus_angolensis_palliatus
ENSVVUG00000002504	A1CF	100	91.597	ENSCGRG00001017413	A1cf	100	91.597	Cricetulus_griseus_chok1gshd
ENSVVUG00000002504	A1CF	100	90.924	ENSCGRG00000017332	A1cf	100	91.261	Cricetulus_griseus_crigri
ENSVVUG00000002504	A1CF	100	73.134	ENSCSEG00000002361	a1cf	100	74.419	Cynoglossus_semilaevis
ENSVVUG00000002504	A1CF	100	75.413	ENSCVAG00000010520	a1cf	100	77.409	Cyprinodon_variegatus
ENSVVUG00000002504	A1CF	100	78.305	ENSDARG00000002968	a1cf	100	79.831	Danio_rerio
ENSVVUG00000002504	A1CF	100	93.434	ENSDNOG00000002829	A1CF	100	93.434	Dasypus_novemcinctus
ENSVVUG00000002504	A1CF	73	98.361	ENSDORG00000025837	-	100	98.361	Dipodomys_ordii
ENSVVUG00000002504	A1CF	82	91.667	ENSETEG00000012527	A1CF	81	91.667	Echinops_telfairi
ENSVVUG00000002504	A1CF	100	94.975	ENSEASG00005012924	A1CF	100	94.975	Equus_asinus_asinus
ENSVVUG00000002504	A1CF	100	94.640	ENSECAG00000010424	A1CF	100	94.640	Equus_caballus
ENSVVUG00000002504	A1CF	84	81.659	ENSEEUG00000000013	A1CF	97	82.579	Erinaceus_europaeus
ENSVVUG00000002504	A1CF	100	77.387	ENSELUG00000003159	a1cf	100	78.224	Esox_lucius
ENSVVUG00000002504	A1CF	100	96.575	ENSFCAG00000011179	A1CF	100	96.575	Felis_catus
ENSVVUG00000002504	A1CF	99	89.700	ENSFALG00000013183	A1CF	100	88.014	Ficedula_albicollis
ENSVVUG00000002504	A1CF	100	93.015	ENSFDAG00000019371	A1CF	100	93.015	Fukomys_damarensis
ENSVVUG00000002504	A1CF	100	70.792	ENSFHEG00000019652	a1cf	96	82.031	Fundulus_heteroclitus
ENSVVUG00000002504	A1CF	100	70.744	ENSGMOG00000018943	a1cf	100	70.579	Gadus_morhua
ENSVVUG00000002504	A1CF	95	87.701	ENSGALG00000003765	A1CF	97	87.522	Gallus_gallus
ENSVVUG00000002504	A1CF	100	70.333	ENSGAFG00000014868	a1cf	100	71.333	Gambusia_affinis
ENSVVUG00000002504	A1CF	100	72.368	ENSGACG00000010241	a1cf	100	72.862	Gasterosteus_aculeatus
ENSVVUG00000002504	A1CF	94	88.889	ENSGAGG00000016508	A1CF	97	87.657	Gopherus_agassizii
ENSVVUG00000002504	A1CF	100	94.108	ENSGGOG00000009670	A1CF	100	94.108	Gorilla_gorilla
ENSVVUG00000002504	A1CF	100	75.537	ENSHBUG00000021959	a1cf	100	77.190	Haplochromis_burtoni
ENSVVUG00000002504	A1CF	100	92.605	ENSHGLG00000008955	A1CF	100	92.269	Heterocephalus_glaber_female
ENSVVUG00000002504	A1CF	100	91.933	ENSHGLG00100000518	A1CF	100	91.597	Heterocephalus_glaber_male
ENSVVUG00000002504	A1CF	99	72.438	ENSHCOG00000017669	a1cf	100	71.732	Hippocampus_comes
ENSVVUG00000002504	A1CF	97	81.343	ENSIPUG00000010367	a1cf	99	79.928	Ictalurus_punctatus
ENSVVUG00000002504	A1CF	73	97.541	ENSSTOG00000005763	-	100	97.541	Ictidomys_tridecemlineatus
ENSVVUG00000002504	A1CF	73	97.541	ENSJJAG00000011550	-	100	97.541	Jaculus_jaculus
ENSVVUG00000002504	A1CF	100	75.285	ENSKMAG00000006568	a1cf	100	76.260	Kryptolebias_marmoratus
ENSVVUG00000002504	A1CF	99	73.650	ENSLBEG00000020994	a1cf	98	75.288	Labrus_bergylta
ENSVVUG00000002504	A1CF	100	82.283	ENSLACG00000008061	A1CF	100	81.942	Latimeria_chalumnae
ENSVVUG00000002504	A1CF	100	81.208	ENSLOCG00000006302	a1cf	100	81.040	Lepisosteus_oculatus
ENSVVUG00000002504	A1CF	100	92.605	ENSLAFG00000015462	A1CF	100	92.605	Loxodonta_africana
ENSVVUG00000002504	A1CF	100	95.719	ENSMFAG00000035948	A1CF	100	95.548	Macaca_fascicularis
ENSVVUG00000002504	A1CF	100	95.719	ENSMMUG00000007077	A1CF	100	95.548	Macaca_mulatta
ENSVVUG00000002504	A1CF	100	95.377	ENSMNEG00000031454	A1CF	100	95.205	Macaca_nemestrina
ENSVVUG00000002504	A1CF	100	94.257	ENSMLEG00000037223	A1CF	100	94.088	Mandrillus_leucophaeus
ENSVVUG00000002504	A1CF	100	74.252	ENSMAMG00000010402	a1cf	100	76.451	Mastacembelus_armatus
ENSVVUG00000002504	A1CF	100	75.671	ENSMZEG00005013245	a1cf	100	76.342	Maylandia_zebra
ENSVVUG00000002504	A1CF	99	89.687	ENSMGAG00000001507	A1CF	100	87.690	Meleagris_gallopavo
ENSVVUG00000002504	A1CF	100	90.756	ENSMAUG00000007422	A1cf	100	90.756	Mesocricetus_auratus
ENSVVUG00000002504	A1CF	100	94.915	ENSMICG00000003377	A1CF	100	94.915	Microcebus_murinus
ENSVVUG00000002504	A1CF	100	91.429	ENSMOCG00000021536	A1cf	100	91.261	Microtus_ochrogaster
ENSVVUG00000002504	A1CF	99	69.597	ENSMMOG00000009422	a1cf	100	70.284	Mola_mola
ENSVVUG00000002504	A1CF	97	91.221	ENSMODG00000016478	A1CF	97	91.555	Monodelphis_domestica
ENSVVUG00000002504	A1CF	99	76.449	ENSMALG00000012992	a1cf	100	74.150	Monopterus_albus
ENSVVUG00000002504	A1CF	100	92.164	MGP_CAROLIEiJ_G0022873	A1cf	100	91.993	Mus_caroli
ENSVVUG00000002504	A1CF	100	92.164	ENSMUSG00000052595	A1cf	99	94.488	Mus_musculus
ENSVVUG00000002504	A1CF	100	91.312	MGP_PahariEiJ_G0014366	A1cf	100	91.141	Mus_pahari
ENSVVUG00000002504	A1CF	100	91.652	MGP_SPRETEiJ_G0023792	A1cf	100	91.482	Mus_spretus
ENSVVUG00000002504	A1CF	100	89.696	ENSMPUG00000016971	A1CF	100	89.696	Mustela_putorius_furo
ENSVVUG00000002504	A1CF	100	92.605	ENSMLUG00000016071	A1CF	100	92.773	Myotis_lucifugus
ENSVVUG00000002504	A1CF	100	92.269	ENSNGAG00000015136	A1cf	100	92.101	Nannospalax_galili
ENSVVUG00000002504	A1CF	100	75.868	ENSNBRG00000001712	a1cf	100	77.521	Neolamprologus_brichardi
ENSVVUG00000002504	A1CF	100	94.790	ENSNLEG00000012028	A1CF	100	94.790	Nomascus_leucogenys
ENSVVUG00000002504	A1CF	94	90.200	ENSMEUG00000015909	A1CF	100	90.018	Notamacropus_eugenii
ENSVVUG00000002504	A1CF	96	82.095	ENSOPRG00000010667	A1CF	97	82.008	Ochotona_princeps
ENSVVUG00000002504	A1CF	73	93.443	ENSODEG00000012177	-	100	93.443	Octodon_degus
ENSVVUG00000002504	A1CF	100	76.198	ENSONIG00000019105	a1cf	100	77.025	Oreochromis_niloticus
ENSVVUG00000002504	A1CF	85	89.107	ENSOANG00000007360	A1CF	99	89.107	Ornithorhynchus_anatinus
ENSVVUG00000002504	A1CF	100	93.027	ENSOCUG00000011587	A1CF	100	93.367	Oryctolagus_cuniculus
ENSVVUG00000002504	A1CF	99	75.943	ENSORLG00000013342	a1cf	100	73.127	Oryzias_latipes
ENSVVUG00000002504	A1CF	99	75.311	ENSORLG00020000586	a1cf	100	74.183	Oryzias_latipes_hni
ENSVVUG00000002504	A1CF	99	75.133	ENSORLG00015018569	a1cf	100	74.020	Oryzias_latipes_hsok
ENSVVUG00000002504	A1CF	99	76.799	ENSOMEG00000013531	a1cf	100	75.124	Oryzias_melastigma
ENSVVUG00000002504	A1CF	100	92.061	ENSOGAG00000012884	A1CF	100	92.230	Otolemur_garnettii
ENSVVUG00000002504	A1CF	100	92.941	ENSOARG00000013695	A1CF	100	93.109	Ovis_aries
ENSVVUG00000002504	A1CF	97	92.014	ENSPPAG00000028115	A1CF	99	95.132	Pan_paniscus
ENSVVUG00000002504	A1CF	100	95.608	ENSPPRG00000012180	A1CF	100	95.608	Panthera_pardus
ENSVVUG00000002504	A1CF	100	95.608	ENSPTIG00000021223	A1CF	100	95.608	Panthera_tigris_altaica
ENSVVUG00000002504	A1CF	100	95.222	ENSPTRG00000002508	A1CF	100	95.222	Pan_troglodytes
ENSVVUG00000002504	A1CF	100	95.719	ENSPANG00000021988	A1CF	100	95.548	Papio_anubis
ENSVVUG00000002504	A1CF	100	79.397	ENSPKIG00000025176	a1cf	100	79.397	Paramormyrops_kingsleyae
ENSVVUG00000002504	A1CF	99	89.777	ENSPSIG00000010318	A1CF	100	88.185	Pelodiscus_sinensis
ENSVVUG00000002504	A1CF	96	71.180	ENSPMGG00000013359	a1cf	99	68.056	Periophthalmus_magnuspinnatus
ENSVVUG00000002504	A1CF	100	92.101	ENSPEMG00000015021	A1cf	100	91.933	Peromyscus_maniculatus_bairdii
ENSVVUG00000002504	A1CF	100	90.068	ENSPCIG00000002175	A1CF	100	89.897	Phascolarctos_cinereus
ENSVVUG00000002504	A1CF	100	74.430	ENSPFOG00000007437	-	100	76.059	Poecilia_formosa
ENSVVUG00000002504	A1CF	100	74.593	ENSPFOG00000006683	a1cf	100	76.221	Poecilia_formosa
ENSVVUG00000002504	A1CF	100	75.413	ENSPLAG00000001210	-	100	77.063	Poecilia_latipinna
ENSVVUG00000002504	A1CF	100	75.413	ENSPLAG00000000026	a1cf	100	77.063	Poecilia_latipinna
ENSVVUG00000002504	A1CF	100	68.046	ENSPMEG00000000921	a1cf	100	69.702	Poecilia_mexicana
ENSVVUG00000002504	A1CF	100	67.157	ENSPMEG00000015529	-	100	68.791	Poecilia_mexicana
ENSVVUG00000002504	A1CF	100	74.430	ENSPREG00000016298	a1cf	100	75.896	Poecilia_reticulata
ENSVVUG00000002504	A1CF	100	95.911	ENSPPYG00000002819	A1CF	100	95.911	Pongo_abelii
ENSVVUG00000002504	A1CF	79	73.922	ENSPCAG00000006463	A1CF	70	89.796	Procavia_capensis
ENSVVUG00000002504	A1CF	100	92.953	ENSPCOG00000024172	A1CF	100	93.121	Propithecus_coquereli
ENSVVUG00000002504	A1CF	100	74.715	ENSPNYG00000017944	a1cf	100	76.346	Pundamilia_nyererei
ENSVVUG00000002504	A1CF	100	80.705	ENSPNAG00000007704	a1cf	100	80.705	Pygocentrus_nattereri
ENSVVUG00000002504	A1CF	100	92.504	ENSRNOG00000033195	A1cf	100	92.334	Rattus_norvegicus
ENSVVUG00000002504	A1CF	100	87.710	ENSRBIG00000042892	A1CF	100	93.600	Rhinopithecus_bieti
ENSVVUG00000002504	A1CF	100	94.426	ENSRROG00000041398	A1CF	100	94.257	Rhinopithecus_roxellana
ENSVVUG00000002504	A1CF	100	94.286	ENSSBOG00000021930	A1CF	100	94.632	Saimiri_boliviensis_boliviensis
ENSVVUG00000002504	A1CF	99	90.672	ENSSHAG00000005096	A1CF	100	89.402	Sarcophilus_harrisii
ENSVVUG00000002504	A1CF	100	79.664	ENSSFOG00015011774	a1cf	100	79.832	Scleropages_formosus
ENSVVUG00000002504	A1CF	100	73.616	ENSSMAG00000013271	a1cf	100	74.104	Scophthalmus_maximus
ENSVVUG00000002504	A1CF	100	75.124	ENSSDUG00000013930	a1cf	100	75.960	Seriola_dumerili
ENSVVUG00000002504	A1CF	100	69.900	ENSSLDG00000004290	a1cf	100	71.212	Seriola_lalandi_dorsalis
ENSVVUG00000002504	A1CF	95	84.229	ENSSARG00000005940	A1CF	96	84.229	Sorex_araneus
ENSVVUG00000002504	A1CF	94	87.938	ENSSPUG00000006797	A1CF	95	86.372	Sphenodon_punctatus
ENSVVUG00000002504	A1CF	73	83.740	ENSSPAG00000017066	-	89	80.153	Stegastes_partitus
ENSVVUG00000002504	A1CF	100	94.286	ENSSSCG00000010431	A1CF	100	94.286	Sus_scrofa
ENSVVUG00000002504	A1CF	99	88.603	ENSTGUG00000005090	A1CF	100	86.789	Taeniopygia_guttata
ENSVVUG00000002504	A1CF	100	72.920	ENSTRUG00000001982	a1cf	100	72.920	Takifugu_rubripes
ENSVVUG00000002504	A1CF	100	73.496	ENSTNIG00000003580	a1cf	100	73.171	Tetraodon_nigroviridis
ENSVVUG00000002504	A1CF	97	87.873	ENSTTRG00000013190	A1CF	95	88.049	Tursiops_truncatus
ENSVVUG00000002504	A1CF	100	97.432	ENSUAMG00000020065	A1CF	100	97.432	Ursus_americanus
ENSVVUG00000002504	A1CF	100	95.939	ENSUMAG00000011162	A1CF	100	95.939	Ursus_maritimus
ENSVVUG00000002504	A1CF	83	94.843	ENSVPAG00000006130	A1CF	86	90.448	Vicugna_pacos
ENSVVUG00000002504	A1CF	100	78.188	ENSXETG00000006611	a1cf	100	78.188	Xenopus_tropicalis
ENSVVUG00000002504	A1CF	100	76.578	ENSXCOG00000003302	a1cf	100	77.741	Xiphophorus_couchianus
ENSVVUG00000002504	A1CF	100	75.574	ENSXMAG00000016703	a1cf	100	76.721	Xiphophorus_maculatus