EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000002608 (Gene tree)
Gene ID: -
Gene Symbol: NOM1
Alias: C7orf3|PPP1R113|SGD1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 17096 bases
Position: chrNBDQ01000015.1:18990305-19007400
Accession: 112916184
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000003370	MA3	PF02847.17	1.5e-22	1	1
ENSVVUP00000003362	MA3	PF02847.17	1.9e-22	1	1
ENSVVUP00000003370	MIF4G	PF02854.19	1.4e-17	1	1
ENSVVUP00000003362	MIF4G	PF02854.19	1.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000004587	NOM1-201	4510	XM_025993732	ENSVVUP00000003362	863 (aa)	XP_025849517	UPI000DF6AAF1
ENSVVUT00000004597	NOM1-202	4342	-	ENSVVUP00000003370	807 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000002608's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000002608's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000002608	NOM1	100	71.510	ENSG00000146909	NOM1	96	72.760	Homo_sapiens
ENSVVUG00000002608	NOM1	60	67.304	ENSAPOG00000012073	nom1	75	69.124	Acanthochromis_polyacanthus
ENSVVUG00000002608	NOM1	83	82.555	ENSAMEG00000001412	NOM1	99	82.579	Ailuropoda_melanoleuca
ENSVVUG00000002608	NOM1	68	71.084	ENSACIG00000018050	nom1	72	68.203	Amphilophus_citrinellus
ENSVVUG00000002608	NOM1	62	65.169	ENSAOCG00000006229	nom1	75	67.123	Amphiprion_ocellaris
ENSVVUG00000002608	NOM1	62	65.356	ENSAPEG00000015994	nom1	74	69.091	Amphiprion_percula
ENSVVUG00000002608	NOM1	80	68.203	ENSATEG00000005405	nom1	74	68.203	Anabas_testudineus
ENSVVUG00000002608	NOM1	76	63.705	ENSAPLG00000006585	NOM1	99	62.689	Anas_platyrhynchos
ENSVVUG00000002608	NOM1	80	58.300	ENSACAG00000011192	NOM1	84	61.227	Anolis_carolinensis
ENSVVUG00000002608	NOM1	62	65.543	ENSACLG00000000033	nom1	78	70.303	Astatotilapia_calliptera
ENSVVUG00000002608	NOM1	59	66.920	ENSAMXG00000041486	nom1	81	57.224	Astyanax_mexicanus
ENSVVUG00000002608	NOM1	96	70.968	ENSBTAG00000016435	NOM1	96	70.096	Bos_taurus
ENSVVUG00000002608	NOM1	74	37.912	WBGene00013129	Y52B11A.10	71	37.705	Caenorhabditis_elegans
ENSVVUG00000002608	NOM1	96	73.716	ENSCJAG00000004336	NOM1	96	71.429	Callithrix_jacchus
ENSVVUG00000002608	NOM1	64	95.568	ENSCAFG00000029845	-	100	95.568	Canis_familiaris
ENSVVUG00000002608	NOM1	100	97.113	ENSCAFG00020005121	NOM1	100	97.113	Canis_lupus_dingo
ENSVVUG00000002608	NOM1	95	70.241	ENSCHIG00000020102	NOM1	95	70.299	Capra_hircus
ENSVVUG00000002608	NOM1	95	74.970	ENSTSYG00000000227	NOM1	95	73.430	Carlito_syrichta
ENSVVUG00000002608	NOM1	61	80.115	ENSCAPG00000016273	NOM1	100	80.115	Cavia_aperea
ENSVVUG00000002608	NOM1	96	64.048	ENSCPOG00000025538	NOM1	97	64.048	Cavia_porcellus
ENSVVUG00000002608	NOM1	96	61.364	ENSCCAG00000014944	NOM1	100	87.921	Cebus_capucinus
ENSVVUG00000002608	NOM1	83	69.348	ENSCLAG00000000267	NOM1	84	68.975	Chinchilla_lanigera
ENSVVUG00000002608	NOM1	68	71.887	ENSCPBG00000018215	NOM1	88	56.783	Chrysemys_picta_bellii
ENSVVUG00000002608	NOM1	60	41.333	ENSCING00000005248	-	97	36.016	Ciona_intestinalis
ENSVVUG00000002608	NOM1	59	86.996	ENSCANG00000041984	NOM1	91	83.835	Colobus_angolensis_palliatus
ENSVVUG00000002608	NOM1	95	69.139	ENSCGRG00001020293	Nom1	97	68.683	Cricetulus_griseus_chok1gshd
ENSVVUG00000002608	NOM1	61	81.698	ENSCGRG00000005405	Nom1	99	81.698	Cricetulus_griseus_crigri
ENSVVUG00000002608	NOM1	72	68.617	ENSCSEG00000000932	nom1	70	68.617	Cynoglossus_semilaevis
ENSVVUG00000002608	NOM1	95	67.742	ENSCVAG00000007562	nom1	78	67.742	Cyprinodon_variegatus
ENSVVUG00000002608	NOM1	96	68.203	ENSDARG00000060027	nom1	99	67.775	Danio_rerio
ENSVVUG00000002608	NOM1	64	68.384	ENSDORG00000015682	Nom1	98	64.399	Dipodomys_ordii
ENSVVUG00000002608	NOM1	60	39.474	FBgn0035336	CG9004	80	36.035	Drosophila_melanogaster
ENSVVUG00000002608	NOM1	84	82.192	ENSETEG00000003104	NOM1	84	74.725	Echinops_telfairi
ENSVVUG00000002608	NOM1	50	48.148	ENSEBUG00000010077	nom1	95	48.148	Eptatretus_burgeri
ENSVVUG00000002608	NOM1	96	73.887	ENSEASG00005001489	NOM1	96	74.792	Equus_asinus_asinus
ENSVVUG00000002608	NOM1	65	84.192	ENSECAG00000007596	NOM1	90	73.770	Equus_caballus
ENSVVUG00000002608	NOM1	58	70.445	ENSELUG00000006266	nom1	74	66.210	Esox_lucius
ENSVVUG00000002608	NOM1	100	89.686	ENSFCAG00000006467	NOM1	100	77.356	Felis_catus
ENSVVUG00000002608	NOM1	60	70.328	ENSFALG00000006904	NOM1	97	61.437	Ficedula_albicollis
ENSVVUG00000002608	NOM1	98	66.280	ENSFDAG00000016241	NOM1	98	65.947	Fukomys_damarensis
ENSVVUG00000002608	NOM1	95	66.820	ENSFHEG00000015974	nom1	74	66.820	Fundulus_heteroclitus
ENSVVUG00000002608	NOM1	60	62.741	ENSGMOG00000005129	nom1	89	54.820	Gadus_morhua
ENSVVUG00000002608	NOM1	98	56.098	ENSGALG00000006437	NOM1	92	54.708	Gallus_gallus
ENSVVUG00000002608	NOM1	95	66.359	ENSGAFG00000003211	nom1	74	66.359	Gambusia_affinis
ENSVVUG00000002608	NOM1	95	59.587	ENSGAGG00000014347	NOM1	97	58.263	Gopherus_agassizii
ENSVVUG00000002608	NOM1	96	72.695	ENSGGOG00000010920	NOM1	88	71.649	Gorilla_gorilla
ENSVVUG00000002608	NOM1	62	65.543	ENSHBUG00000014616	nom1	78	67.580	Haplochromis_burtoni
ENSVVUG00000002608	NOM1	96	84.753	ENSHGLG00000007392	NOM1	91	84.753	Heterocephalus_glaber_female
ENSVVUG00000002608	NOM1	96	84.753	ENSHGLG00100014407	NOM1	89	92.105	Heterocephalus_glaber_male
ENSVVUG00000002608	NOM1	63	61.273	ENSIPUG00000013980	nom1	82	56.403	Ictalurus_punctatus
ENSVVUG00000002608	NOM1	63	86.099	ENSSTOG00000031736	NOM1	99	79.787	Ictidomys_tridecemlineatus
ENSVVUG00000002608	NOM1	57	83.231	ENSJJAG00000011716	Nom1	99	83.231	Jaculus_jaculus
ENSVVUG00000002608	NOM1	60	65.517	ENSLBEG00000009252	nom1	82	55.994	Labrus_bergylta
ENSVVUG00000002608	NOM1	80	60.888	ENSLACG00000011777	NOM1	82	59.827	Latimeria_chalumnae
ENSVVUG00000002608	NOM1	95	67.580	ENSLOCG00000012452	nom1	83	59.593	Lepisosteus_oculatus
ENSVVUG00000002608	NOM1	96	64.593	ENSLAFG00000007119	NOM1	98	64.593	Loxodonta_africana
ENSVVUG00000002608	NOM1	100	68.013	ENSMMUG00000039033	NOM1	95	68.198	Macaca_mulatta
ENSVVUG00000002608	NOM1	62	83.804	ENSMLEG00000037062	NOM1	100	83.804	Mandrillus_leucophaeus
ENSVVUG00000002608	NOM1	95	66.820	ENSMAMG00000004118	nom1	79	66.820	Mastacembelus_armatus
ENSVVUG00000002608	NOM1	62	65.543	ENSMZEG00005000384	nom1	79	67.123	Maylandia_zebra
ENSVVUG00000002608	NOM1	79	52.241	ENSMGAG00000005051	NOM1	97	62.023	Meleagris_gallopavo
ENSVVUG00000002608	NOM1	96	70.375	ENSMAUG00000017988	Nom1	96	70.688	Mesocricetus_auratus
ENSVVUG00000002608	NOM1	100	73.333	ENSMICG00000017531	NOM1	96	74.190	Microcebus_murinus
ENSVVUG00000002608	NOM1	97	69.303	ENSMOCG00000015962	Nom1	79	75.731	Microtus_ochrogaster
ENSVVUG00000002608	NOM1	57	70.120	ENSMMOG00000004419	nom1	80	54.585	Mola_mola
ENSVVUG00000002608	NOM1	64	76.396	ENSMODG00000005177	NOM1	99	63.837	Monodelphis_domestica
ENSVVUG00000002608	NOM1	73	70.455	ENSMALG00000008800	nom1	85	56.741	Monopterus_albus
ENSVVUG00000002608	NOM1	98	66.282	MGP_CAROLIEiJ_G0027043	Nom1	95	66.393	Mus_caroli
ENSVVUG00000002608	NOM1	97	67.409	ENSMUSG00000001569	Nom1	95	66.548	Mus_musculus
ENSVVUG00000002608	NOM1	97	67.938	MGP_SPRETEiJ_G0028039	Nom1	95	67.223	Mus_spretus
ENSVVUG00000002608	NOM1	79	77.114	ENSMPUG00000009745	NOM1	99	77.405	Mustela_putorius_furo
ENSVVUG00000002608	NOM1	71	76.129	ENSMLUG00000009129	NOM1	89	83.799	Myotis_lucifugus
ENSVVUG00000002608	NOM1	82	67.580	ENSNBRG00000016429	nom1	94	66.922	Neolamprologus_brichardi
ENSVVUG00000002608	NOM1	96	70.784	ENSNLEG00000000238	NOM1	96	70.560	Nomascus_leucogenys
ENSVVUG00000002608	NOM1	72	65.934	ENSMEUG00000001108	NOM1	86	65.934	Notamacropus_eugenii
ENSVVUG00000002608	NOM1	86	63.768	ENSOPRG00000014676	NOM1	86	63.768	Ochotona_princeps
ENSVVUG00000002608	NOM1	77	78.027	ENSODEG00000009399	NOM1	97	71.325	Octodon_degus
ENSVVUG00000002608	NOM1	82	66.667	ENSONIG00000005958	nom1	84	66.667	Oreochromis_niloticus
ENSVVUG00000002608	NOM1	54	76.190	ENSOANG00000006139	-	97	76.190	Ornithorhynchus_anatinus
ENSVVUG00000002608	NOM1	93	59.333	ENSOCUG00000021448	-	92	62.311	Oryctolagus_cuniculus
ENSVVUG00000002608	NOM1	96	74.880	ENSOCUG00000004071	-	96	74.337	Oryctolagus_cuniculus
ENSVVUG00000002608	NOM1	77	67.464	ENSORLG00000010541	nom1	83	55.556	Oryzias_latipes
ENSVVUG00000002608	NOM1	77	67.464	ENSORLG00020010789	nom1	90	55.731	Oryzias_latipes_hni
ENSVVUG00000002608	NOM1	77	67.464	ENSORLG00015010475	nom1	90	55.301	Oryzias_latipes_hsok
ENSVVUG00000002608	NOM1	58	67.464	ENSOMEG00000004219	nom1	76	66.359	Oryzias_melastigma
ENSVVUG00000002608	NOM1	67	78.238	ENSOGAG00000001124	NOM1	100	75.082	Otolemur_garnettii
ENSVVUG00000002608	NOM1	79	73.043	ENSOARG00000007261	NOM1	98	71.196	Ovis_aries
ENSVVUG00000002608	NOM1	96	72.414	ENSPPAG00000041374	NOM1	96	73.413	Pan_paniscus
ENSVVUG00000002608	NOM1	81	88.839	ENSPTIG00000013532	NOM1	90	88.839	Panthera_tigris_altaica
ENSVVUG00000002608	NOM1	96	72.295	ENSPTRG00000019917	NOM1	96	73.054	Pan_troglodytes
ENSVVUG00000002608	NOM1	100	71.284	ENSPANG00000007605	NOM1	96	71.868	Papio_anubis
ENSVVUG00000002608	NOM1	97	61.751	ENSPKIG00000005825	nom1	82	55.298	Paramormyrops_kingsleyae
ENSVVUG00000002608	NOM1	63	71.402	ENSPSIG00000017848	NOM1	88	72.368	Pelodiscus_sinensis
ENSVVUG00000002608	NOM1	78	66.359	ENSPMGG00000002577	nom1	81	59.205	Periophthalmus_magnuspinnatus
ENSVVUG00000002608	NOM1	96	70.799	ENSPEMG00000024180	Nom1	95	70.264	Peromyscus_maniculatus_bairdii
ENSVVUG00000002608	NOM1	98	63.277	ENSPCIG00000027941	NOM1	95	65.398	Phascolarctos_cinereus
ENSVVUG00000002608	NOM1	57	70.040	ENSPFOG00000015771	nom1	81	57.994	Poecilia_formosa
ENSVVUG00000002608	NOM1	57	70.040	ENSPLAG00000007856	nom1	80	58.382	Poecilia_latipinna
ENSVVUG00000002608	NOM1	57	69.231	ENSPMEG00000014155	nom1	81	59.145	Poecilia_mexicana
ENSVVUG00000002608	NOM1	95	67.281	ENSPREG00000008850	nom1	74	67.281	Poecilia_reticulata
ENSVVUG00000002608	NOM1	99	66.818	ENSPPYG00000018222	NOM1	95	67.219	Pongo_abelii
ENSVVUG00000002608	NOM1	91	60.648	ENSPCAG00000000440	NOM1	96	59.487	Procavia_capensis
ENSVVUG00000002608	NOM1	59	88.341	ENSPCOG00000015222	NOM1	100	82.486	Propithecus_coquereli
ENSVVUG00000002608	NOM1	100	72.924	ENSPVAG00000014760	NOM1	96	74.167	Pteropus_vampyrus
ENSVVUG00000002608	NOM1	62	65.421	ENSPNYG00000006975	nom1	95	65.849	Pundamilia_nyererei
ENSVVUG00000002608	NOM1	62	62.222	ENSPNAG00000011085	nom1	78	55.524	Pygocentrus_nattereri
ENSVVUG00000002608	NOM1	96	63.701	ENSRNOG00000048969	AABR07059041.1	100	62.635	Rattus_norvegicus
ENSVVUG00000002608	NOM1	98	71.183	ENSRBIG00000037042	NOM1	95	71.209	Rhinopithecus_bieti
ENSVVUG00000002608	NOM1	100	70.079	ENSRROG00000037293	NOM1	95	70.972	Rhinopithecus_roxellana
ENSVVUG00000002608	NOM1	86	65.240	ENSSHAG00000017998	-	98	69.308	Sarcophilus_harrisii
ENSVVUG00000002608	NOM1	56	64.730	ENSSFOG00015003196	nom1	99	64.730	Scleropages_formosus
ENSVVUG00000002608	NOM1	96	52.241	ENSSMAG00000011047	nom1	81	58.730	Scophthalmus_maximus
ENSVVUG00000002608	NOM1	95	68.664	ENSSDUG00000006834	nom1	74	68.664	Seriola_dumerili
ENSVVUG00000002608	NOM1	95	68.664	ENSSLDG00000021812	nom1	74	68.664	Seriola_lalandi_dorsalis
ENSVVUG00000002608	NOM1	84	53.307	ENSSPUG00000002556	NOM1	99	58.836	Sphenodon_punctatus
ENSVVUG00000002608	NOM1	57	70.683	ENSSPAG00000000953	nom1	75	68.664	Stegastes_partitus
ENSVVUG00000002608	NOM1	83	60.331	ENSTGUG00000000702	-	97	59.291	Taeniopygia_guttata
ENSVVUG00000002608	NOM1	78	67.580	ENSTRUG00000010239	nom1	81	57.910	Takifugu_rubripes
ENSVVUG00000002608	NOM1	82	55.878	ENSTNIG00000012783	nom1	90	55.878	Tetraodon_nigroviridis
ENSVVUG00000002608	NOM1	97	73.122	ENSTTRG00000009691	NOM1	96	71.360	Tursiops_truncatus
ENSVVUG00000002608	NOM1	100	81.435	ENSUAMG00000025450	NOM1	100	80.730	Ursus_americanus
ENSVVUG00000002608	NOM1	87	80.552	ENSUMAG00000014275	NOM1	100	82.197	Ursus_maritimus
ENSVVUG00000002608	NOM1	85	55.482	ENSXETG00000021611	nom1	92	70.259	Xenopus_tropicalis
ENSVVUG00000002608	NOM1	95	67.281	ENSXMAG00000002451	nom1	74	67.281	Xiphophorus_maculatus