EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000002640 (Gene tree)
Gene ID: -
Gene Symbol: LSM7
Alias: YNL147W
Full Name: LSM7 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 4486 bases
Position: chrNBDQ01000164.1:1464869-1469354
Accession: 20470
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000003399	LSM	PF01423.22	5.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000004636	LSM7-201	829	-	ENSVVUP00000003399	109 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000002640's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000002640's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000002640	LSM7	65	98.592	ENSG00000130332	LSM7	100	100.000	Homo_sapiens
ENSVVUG00000002640	LSM7	59	95.312	ENSAPOG00000015573	lsm7	55	95.312	Acanthochromis_polyacanthus
ENSVVUG00000002640	LSM7	65	100.000	ENSAMEG00000005484	LSM7	69	100.000	Ailuropoda_melanoleuca
ENSVVUG00000002640	LSM7	61	95.522	ENSACIG00000006498	lsm7	53	95.522	Amphilophus_citrinellus
ENSVVUG00000002640	LSM7	65	94.366	ENSAOCG00000001077	lsm7	65	94.366	Amphiprion_ocellaris
ENSVVUG00000002640	LSM7	64	95.714	ENSAPEG00000000694	lsm7	69	94.366	Amphiprion_percula
ENSVVUG00000002640	LSM7	65	94.366	ENSAPEG00000024447	lsm7	65	94.366	Amphiprion_percula
ENSVVUG00000002640	LSM7	65	94.366	ENSATEG00000008557	lsm7	69	94.366	Anabas_testudineus
ENSVVUG00000002640	LSM7	65	87.324	ENSANAG00000022222	-	67	87.324	Aotus_nancymaae
ENSVVUG00000002640	LSM7	65	98.592	ENSANAG00000037196	-	69	98.592	Aotus_nancymaae
ENSVVUG00000002640	LSM7	65	94.366	ENSACLG00000021021	lsm7	69	94.366	Astatotilapia_calliptera
ENSVVUG00000002640	LSM7	65	94.366	ENSAMXG00000037622	lsm7	69	94.366	Astyanax_mexicanus
ENSVVUG00000002640	LSM7	65	98.592	ENSBTAG00000004521	LSM7	69	98.592	Bos_taurus
ENSVVUG00000002640	LSM7	64	52.857	WBGene00003081	lsm-7	67	52.857	Caenorhabditis_elegans
ENSVVUG00000002640	LSM7	65	100.000	ENSCAFG00000019409	LSM7	69	100.000	Canis_familiaris
ENSVVUG00000002640	LSM7	65	100.000	ENSCAFG00020018168	LSM7	52	100.000	Canis_lupus_dingo
ENSVVUG00000002640	LSM7	65	98.592	ENSCHIG00000023663	LSM7	69	98.592	Capra_hircus
ENSVVUG00000002640	LSM7	65	98.592	ENSCAPG00000014534	LSM7	100	98.592	Cavia_aperea
ENSVVUG00000002640	LSM7	65	98.592	ENSCPOG00000014025	LSM7	70	98.592	Cavia_porcellus
ENSVVUG00000002640	LSM7	65	98.592	ENSCCAG00000035456	LSM7	70	98.592	Cebus_capucinus
ENSVVUG00000002640	LSM7	65	98.592	ENSCATG00000023543	LSM7	69	98.592	Cercocebus_atys
ENSVVUG00000002640	LSM7	65	98.592	ENSCLAG00000011635	LSM7	69	98.592	Chinchilla_lanigera
ENSVVUG00000002640	LSM7	65	98.592	ENSCSAG00000011599	LSM7	69	98.592	Chlorocebus_sabaeus
ENSVVUG00000002640	LSM7	67	91.781	ENSCPBG00000021317	LSM7	80	89.333	Chrysemys_picta_bellii
ENSVVUG00000002640	LSM7	62	80.882	ENSCING00000022134	-	69	80.882	Ciona_intestinalis
ENSVVUG00000002640	LSM7	65	98.592	ENSCANG00000035525	LSM7	69	98.592	Colobus_angolensis_palliatus
ENSVVUG00000002640	LSM7	65	97.183	ENSCGRG00001000807	-	69	97.183	Cricetulus_griseus_chok1gshd
ENSVVUG00000002640	LSM7	55	86.667	ENSCGRG00001016005	-	60	86.667	Cricetulus_griseus_chok1gshd
ENSVVUG00000002640	LSM7	55	86.667	ENSCGRG00000006821	-	60	86.667	Cricetulus_griseus_crigri
ENSVVUG00000002640	LSM7	65	97.183	ENSCGRG00000014355	-	68	97.183	Cricetulus_griseus_crigri
ENSVVUG00000002640	LSM7	65	94.366	ENSCSEG00000014900	lsm7	60	94.366	Cynoglossus_semilaevis
ENSVVUG00000002640	LSM7	65	94.366	ENSCVAG00000021091	lsm7	66	94.366	Cyprinodon_variegatus
ENSVVUG00000002640	LSM7	65	95.775	ENSDARG00000058328	lsm7	69	95.775	Danio_rerio
ENSVVUG00000002640	LSM7	65	98.592	ENSDORG00000024460	Lsm7	70	98.592	Dipodomys_ordii
ENSVVUG00000002640	LSM7	62	76.812	FBgn0261068	LSm7	63	76.812	Drosophila_melanogaster
ENSVVUG00000002640	LSM7	65	97.183	ENSETEG00000012788	LSM7	70	97.183	Echinops_telfairi
ENSVVUG00000002640	LSM7	65	84.507	ENSEBUG00000016992	lsm7	68	84.507	Eptatretus_burgeri
ENSVVUG00000002640	LSM7	60	60.000	ENSEBUG00000010470	-	61	60.000	Eptatretus_burgeri
ENSVVUG00000002640	LSM7	65	100.000	ENSFCAG00000003445	LSM7	69	100.000	Felis_catus
ENSVVUG00000002640	LSM7	65	94.366	ENSFALG00000011912	LSM7	70	94.366	Ficedula_albicollis
ENSVVUG00000002640	LSM7	65	98.592	ENSFDAG00000007661	LSM7	74	98.592	Fukomys_damarensis
ENSVVUG00000002640	LSM7	65	94.366	ENSFHEG00000006349	lsm7	63	94.366	Fundulus_heteroclitus
ENSVVUG00000002640	LSM7	65	91.549	ENSGMOG00000013320	lsm7	69	91.549	Gadus_morhua
ENSVVUG00000002640	LSM7	65	94.366	ENSGAFG00000013902	lsm7	69	94.366	Gambusia_affinis
ENSVVUG00000002640	LSM7	65	92.958	ENSGACG00000010390	lsm7	69	92.958	Gasterosteus_aculeatus
ENSVVUG00000002640	LSM7	65	98.592	ENSGGOG00000010172	LSM7	69	98.592	Gorilla_gorilla
ENSVVUG00000002640	LSM7	65	94.366	ENSHBUG00000004616	lsm7	69	94.366	Haplochromis_burtoni
ENSVVUG00000002640	LSM7	65	98.592	ENSHGLG00000010587	LSM7	69	98.592	Heterocephalus_glaber_female
ENSVVUG00000002640	LSM7	65	98.592	ENSHGLG00100000852	LSM7	69	98.592	Heterocephalus_glaber_male
ENSVVUG00000002640	LSM7	65	94.366	ENSHCOG00000020252	lsm7	70	94.366	Hippocampus_comes
ENSVVUG00000002640	LSM7	65	92.958	ENSIPUG00000024724	lsm7	69	92.958	Ictalurus_punctatus
ENSVVUG00000002640	LSM7	65	98.592	ENSSTOG00000028372	LSM7	70	98.592	Ictidomys_tridecemlineatus
ENSVVUG00000002640	LSM7	65	95.775	ENSJJAG00000001936	Lsm7	69	95.775	Jaculus_jaculus
ENSVVUG00000002640	LSM7	65	94.366	ENSKMAG00000022151	lsm7	69	94.366	Kryptolebias_marmoratus
ENSVVUG00000002640	LSM7	65	94.366	ENSLBEG00000005203	lsm7	69	94.366	Labrus_bergylta
ENSVVUG00000002640	LSM7	65	97.183	ENSLACG00000015700	LSM7	69	97.183	Latimeria_chalumnae
ENSVVUG00000002640	LSM7	65	97.183	ENSLOCG00000004356	lsm7	69	97.183	Lepisosteus_oculatus
ENSVVUG00000002640	LSM7	65	98.592	ENSLAFG00000029302	LSM7	69	98.592	Loxodonta_africana
ENSVVUG00000002640	LSM7	65	98.592	ENSMFAG00000044572	LSM7	69	98.592	Macaca_fascicularis
ENSVVUG00000002640	LSM7	65	98.592	ENSMMUG00000000452	LSM7	70	98.592	Macaca_mulatta
ENSVVUG00000002640	LSM7	65	98.592	ENSMNEG00000004393	LSM7	69	98.592	Macaca_nemestrina
ENSVVUG00000002640	LSM7	65	98.592	ENSMLEG00000030852	LSM7	70	98.592	Mandrillus_leucophaeus
ENSVVUG00000002640	LSM7	65	94.366	ENSMAMG00000005410	lsm7	69	94.366	Mastacembelus_armatus
ENSVVUG00000002640	LSM7	65	94.366	ENSMZEG00005028055	lsm7	69	94.366	Maylandia_zebra
ENSVVUG00000002640	LSM7	65	95.775	ENSMGAG00000000750	LSM7	61	95.775	Meleagris_gallopavo
ENSVVUG00000002640	LSM7	65	97.183	ENSMAUG00000009276	Lsm7	69	97.183	Mesocricetus_auratus
ENSVVUG00000002640	LSM7	65	98.592	ENSMICG00000028619	-	69	98.592	Microcebus_murinus
ENSVVUG00000002640	LSM7	65	98.592	ENSMICG00000009988	-	69	98.592	Microcebus_murinus
ENSVVUG00000002640	LSM7	65	97.183	ENSMOCG00000016925	Lsm7	69	97.183	Microtus_ochrogaster
ENSVVUG00000002640	LSM7	65	94.366	ENSMMOG00000019645	lsm7	68	94.366	Mola_mola
ENSVVUG00000002640	LSM7	65	97.183	ENSMODG00000004722	LSM7	69	97.183	Monodelphis_domestica
ENSVVUG00000002640	LSM7	65	94.366	ENSMALG00000014511	lsm7	55	94.366	Monopterus_albus
ENSVVUG00000002640	LSM7	65	95.775	MGP_CAROLIEiJ_G0015607	Lsm7	69	95.775	Mus_caroli
ENSVVUG00000002640	LSM7	65	95.775	ENSMUSG00000035215	Lsm7	69	95.775	Mus_musculus
ENSVVUG00000002640	LSM7	65	95.775	MGP_PahariEiJ_G0031020	Lsm7	69	95.775	Mus_pahari
ENSVVUG00000002640	LSM7	65	95.775	MGP_SPRETEiJ_G0016425	Lsm7	69	95.775	Mus_spretus
ENSVVUG00000002640	LSM7	65	90.141	ENSMLUG00000024002	-	66	90.141	Myotis_lucifugus
ENSVVUG00000002640	LSM7	65	97.183	ENSMLUG00000013097	-	69	97.183	Myotis_lucifugus
ENSVVUG00000002640	LSM7	65	95.775	ENSNGAG00000021637	Lsm7	69	95.775	Nannospalax_galili
ENSVVUG00000002640	LSM7	64	95.714	ENSNBRG00000001237	-	56	95.714	Neolamprologus_brichardi
ENSVVUG00000002640	LSM7	65	94.366	ENSNBRG00000015770	lsm7	61	94.366	Neolamprologus_brichardi
ENSVVUG00000002640	LSM7	65	98.592	ENSNLEG00000002265	LSM7	69	98.592	Nomascus_leucogenys
ENSVVUG00000002640	LSM7	65	98.592	ENSODEG00000013590	-	69	98.592	Octodon_degus
ENSVVUG00000002640	LSM7	65	91.549	ENSODEG00000018769	-	69	91.549	Octodon_degus
ENSVVUG00000002640	LSM7	65	85.915	ENSODEG00000008190	-	75	85.915	Octodon_degus
ENSVVUG00000002640	LSM7	65	94.366	ENSONIG00000001801	lsm7	61	94.366	Oreochromis_niloticus
ENSVVUG00000002640	LSM7	65	94.366	ENSORLG00000023951	lsm7	69	94.366	Oryzias_latipes
ENSVVUG00000002640	LSM7	65	94.366	ENSORLG00020022226	lsm7	69	94.366	Oryzias_latipes_hni
ENSVVUG00000002640	LSM7	65	94.366	ENSORLG00015020044	lsm7	66	94.366	Oryzias_latipes_hsok
ENSVVUG00000002640	LSM7	65	94.366	ENSOMEG00000012806	lsm7	69	94.366	Oryzias_melastigma
ENSVVUG00000002640	LSM7	65	84.507	ENSOGAG00000024373	-	70	84.507	Otolemur_garnettii
ENSVVUG00000002640	LSM7	65	95.775	ENSOGAG00000000144	-	70	95.775	Otolemur_garnettii
ENSVVUG00000002640	LSM7	65	98.592	ENSOARG00000014013	LSM7	69	98.592	Ovis_aries
ENSVVUG00000002640	LSM7	65	98.592	ENSPPAG00000026500	LSM7	69	98.592	Pan_paniscus
ENSVVUG00000002640	LSM7	65	100.000	ENSPPRG00000008624	LSM7	69	100.000	Panthera_pardus
ENSVVUG00000002640	LSM7	65	100.000	ENSPTIG00000016252	LSM7	69	100.000	Panthera_tigris_altaica
ENSVVUG00000002640	LSM7	65	98.592	ENSPTRG00000010233	LSM7	69	98.592	Pan_troglodytes
ENSVVUG00000002640	LSM7	65	98.592	ENSPANG00000020668	LSM7	69	98.592	Papio_anubis
ENSVVUG00000002640	LSM7	65	95.775	ENSPKIG00000011325	lsm7	69	95.775	Paramormyrops_kingsleyae
ENSVVUG00000002640	LSM7	65	95.775	ENSPSIG00000017149	LSM7	62	95.775	Pelodiscus_sinensis
ENSVVUG00000002640	LSM7	65	94.366	ENSPMGG00000006498	lsm7	69	94.366	Periophthalmus_magnuspinnatus
ENSVVUG00000002640	LSM7	65	97.183	ENSPCIG00000030454	LSM7	70	97.183	Phascolarctos_cinereus
ENSVVUG00000002640	LSM7	65	92.958	ENSPFOG00000012467	lsm7	63	92.958	Poecilia_formosa
ENSVVUG00000002640	LSM7	65	92.958	ENSPLAG00000000252	lsm7	66	92.958	Poecilia_latipinna
ENSVVUG00000002640	LSM7	65	92.958	ENSPMEG00000000587	lsm7	66	92.958	Poecilia_mexicana
ENSVVUG00000002640	LSM7	65	98.592	ENSPCOG00000017177	LSM7	70	98.592	Propithecus_coquereli
ENSVVUG00000002640	LSM7	65	94.366	ENSPNYG00000006938	lsm7	69	94.366	Pundamilia_nyererei
ENSVVUG00000002640	LSM7	65	94.366	ENSPNAG00000010141	lsm7	70	94.366	Pygocentrus_nattereri
ENSVVUG00000002640	LSM7	65	95.775	ENSRNOG00000019552	Lsm7	69	95.775	Rattus_norvegicus
ENSVVUG00000002640	LSM7	65	98.592	ENSRBIG00000035978	LSM7	69	98.592	Rhinopithecus_bieti
ENSVVUG00000002640	LSM7	65	98.592	ENSRROG00000034044	LSM7	69	98.592	Rhinopithecus_roxellana
ENSVVUG00000002640	LSM7	54	46.774	YNL147W	-	54	46.774	Saccharomyces_cerevisiae
ENSVVUG00000002640	LSM7	65	98.592	ENSSBOG00000034899	LSM7	69	98.592	Saimiri_boliviensis_boliviensis
ENSVVUG00000002640	LSM7	66	93.056	ENSSFOG00015006728	lsm7	69	92.958	Scleropages_formosus
ENSVVUG00000002640	LSM7	65	94.366	ENSSMAG00000004195	lsm7	65	94.366	Scophthalmus_maximus
ENSVVUG00000002640	LSM7	65	94.366	ENSSDUG00000001863	lsm7	69	94.366	Seriola_dumerili
ENSVVUG00000002640	LSM7	65	94.366	ENSSLDG00000016339	lsm7	69	94.366	Seriola_lalandi_dorsalis
ENSVVUG00000002640	LSM7	65	94.366	ENSSPAG00000015221	lsm7	69	94.366	Stegastes_partitus
ENSVVUG00000002640	LSM7	65	98.592	ENSSSCG00000013463	LSM7	70	98.592	Sus_scrofa
ENSVVUG00000002640	LSM7	65	94.366	ENSTGUG00000000067	LSM7	70	94.366	Taeniopygia_guttata
ENSVVUG00000002640	LSM7	65	94.366	ENSTRUG00000022913	lsm7	69	94.366	Takifugu_rubripes
ENSVVUG00000002640	LSM7	65	94.366	ENSTNIG00000015525	lsm7	69	94.366	Tetraodon_nigroviridis
ENSVVUG00000002640	LSM7	64	87.143	ENSTBEG00000016602	LSM7	100	87.143	Tupaia_belangeri
ENSVVUG00000002640	LSM7	65	100.000	ENSUAMG00000000912	LSM7	59	100.000	Ursus_americanus
ENSVVUG00000002640	LSM7	65	100.000	ENSUMAG00000006556	LSM7	55	100.000	Ursus_maritimus
ENSVVUG00000002640	LSM7	65	92.958	ENSXETG00000022166	lsm7	70	92.958	Xenopus_tropicalis
ENSVVUG00000002640	LSM7	65	94.366	ENSXCOG00000002572	lsm7	70	94.366	Xiphophorus_couchianus
ENSVVUG00000002640	LSM7	65	94.366	ENSXMAG00000018630	lsm7	69	94.366	Xiphophorus_maculatus