EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000002953 (Gene tree)
Gene ID: -
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 35809 bases
Position: chrNBDQ01000205.1:2388498-2424306
Accession: 19304
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000003760	RRM_1	PF00076.22	4.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000005148	SCAF4-201	3375	-	ENSVVUP00000003760	1120 (aa)	-	UPI000BAA0689

Gene Model

Click here to download ENSVVUG00000002953's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000002953's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000002953	SCAF4	100	94.797	ENSG00000156304	SCAF4	99	94.797	Homo_sapiens
ENSVVUG00000002953	SCAF4	76	97.183	ENSAMEG00000014987	SCAF4	100	97.183	Ailuropoda_melanoleuca
ENSVVUG00000002953	SCAF4	100	76.346	ENSAPLG00000002509	SCAF4	58	83.699	Anas_platyrhynchos
ENSVVUG00000002953	SCAF4	100	64.530	ENSACAG00000002569	SCAF4	51	84.146	Anolis_carolinensis
ENSVVUG00000002953	SCAF4	100	94.009	ENSANAG00000037494	SCAF4	99	94.009	Aotus_nancymaae
ENSVVUG00000002953	SCAF4	93	49.817	ENSAMXG00000008585	scaf4a	59	62.016	Astyanax_mexicanus
ENSVVUG00000002953	SCAF4	100	94.154	ENSBTAG00000018855	SCAF4	99	94.420	Bos_taurus
ENSVVUG00000002953	SCAF4	100	94.102	ENSCJAG00000008993	SCAF4	98	95.244	Callithrix_jacchus
ENSVVUG00000002953	SCAF4	100	100.000	ENSCAFG00000008863	SCAF4	99	100.000	Canis_familiaris
ENSVVUG00000002953	SCAF4	100	97.768	ENSCAFG00020026019	SCAF4	100	100.000	Canis_lupus_dingo
ENSVVUG00000002953	SCAF4	100	93.628	ENSCHIG00000008385	SCAF4	99	93.805	Capra_hircus
ENSVVUG00000002953	SCAF4	92	94.845	ENSTSYG00000011344	SCAF4	98	94.866	Carlito_syrichta
ENSVVUG00000002953	SCAF4	100	89.753	ENSCPOG00000012443	SCAF4	99	89.841	Cavia_porcellus
ENSVVUG00000002953	SCAF4	100	94.523	ENSCCAG00000033727	SCAF4	99	94.523	Cebus_capucinus
ENSVVUG00000002953	SCAF4	100	93.146	ENSCATG00000030379	SCAF4	100	93.322	Cercocebus_atys
ENSVVUG00000002953	SCAF4	100	90.443	ENSCLAG00000006298	SCAF4	100	90.009	Chinchilla_lanigera
ENSVVUG00000002953	SCAF4	100	92.876	ENSCSAG00000009438	SCAF4	99	92.876	Chlorocebus_sabaeus
ENSVVUG00000002953	SCAF4	100	93.816	ENSCANG00000029847	SCAF4	99	93.993	Colobus_angolensis_palliatus
ENSVVUG00000002953	SCAF4	68	90.130	ENSCGRG00001020821	Scaf4	65	90.260	Cricetulus_griseus_chok1gshd
ENSVVUG00000002953	SCAF4	68	89.290	ENSCGRG00000014360	Scaf4	100	81.765	Cricetulus_griseus_crigri
ENSVVUG00000002953	SCAF4	79	51.679	ENSCSEG00000019549	scaf4a	52	54.688	Cynoglossus_semilaevis
ENSVVUG00000002953	SCAF4	79	53.159	ENSDARG00000077093	scaf4a	56	60.345	Danio_rerio
ENSVVUG00000002953	SCAF4	100	91.208	ENSDNOG00000019014	SCAF4	93	91.385	Dasypus_novemcinctus
ENSVVUG00000002953	SCAF4	96	80.939	ENSETEG00000000583	SCAF4	99	80.847	Echinops_telfairi
ENSVVUG00000002953	SCAF4	100	97.691	ENSEASG00005007756	SCAF4	99	97.691	Equus_asinus_asinus
ENSVVUG00000002953	SCAF4	100	97.516	ENSECAG00000014248	SCAF4	99	97.516	Equus_caballus
ENSVVUG00000002953	SCAF4	58	52.128	ENSELUG00000002779	SCAF8	66	68.841	Esox_lucius
ENSVVUG00000002953	SCAF4	100	97.520	ENSFCAG00000002228	SCAF4	99	97.520	Felis_catus
ENSVVUG00000002953	SCAF4	100	89.369	ENSFDAG00000017780	SCAF4	100	89.542	Fukomys_damarensis
ENSVVUG00000002953	SCAF4	100	77.305	ENSGALG00000033965	SCAF4	58	83.386	Gallus_gallus
ENSVVUG00000002953	SCAF4	91	90.590	ENSGGOG00000015557	SCAF4	99	93.925	Gorilla_gorilla
ENSVVUG00000002953	SCAF4	100	91.484	ENSHGLG00000010582	SCAF4	99	91.835	Heterocephalus_glaber_female
ENSVVUG00000002953	SCAF4	100	91.484	ENSHGLG00100009441	SCAF4	100	91.835	Heterocephalus_glaber_male
ENSVVUG00000002953	SCAF4	100	87.014	ENSSTOG00000004450	SCAF4	100	87.279	Ictidomys_tridecemlineatus
ENSVVUG00000002953	SCAF4	100	89.618	ENSJJAG00000019447	Scaf4	99	89.418	Jaculus_jaculus
ENSVVUG00000002953	SCAF4	98	61.871	ENSLACG00000013913	SCAF4	59	66.667	Latimeria_chalumnae
ENSVVUG00000002953	SCAF4	95	57.819	ENSLOCG00000009162	scaf4a	58	66.667	Lepisosteus_oculatus
ENSVVUG00000002953	SCAF4	100	94.595	ENSLAFG00000010710	SCAF4	99	94.044	Loxodonta_africana
ENSVVUG00000002953	SCAF4	100	92.901	ENSMFAG00000037668	SCAF4	99	92.813	Macaca_fascicularis
ENSVVUG00000002953	SCAF4	100	92.813	ENSMMUG00000001712	SCAF4	99	92.726	Macaca_mulatta
ENSVVUG00000002953	SCAF4	100	92.820	ENSMNEG00000032966	SCAF4	99	92.557	Macaca_nemestrina
ENSVVUG00000002953	SCAF4	100	92.976	ENSMLEG00000039674	SCAF4	99	93.327	Mandrillus_leucophaeus
ENSVVUG00000002953	SCAF4	100	77.148	ENSMGAG00000014515	SCAF4	58	84.038	Meleagris_gallopavo
ENSVVUG00000002953	SCAF4	100	87.996	ENSMAUG00000013307	Scaf4	100	88.731	Mesocricetus_auratus
ENSVVUG00000002953	SCAF4	100	95.128	ENSMICG00000005256	SCAF4	99	95.128	Microcebus_murinus
ENSVVUG00000002953	SCAF4	98	91.523	ENSMOCG00000012087	Scaf4	94	92.057	Microtus_ochrogaster
ENSVVUG00000002953	SCAF4	100	85.765	ENSMODG00000021040	SCAF4	99	85.231	Monodelphis_domestica
ENSVVUG00000002953	SCAF4	100	89.345	MGP_CAROLIEiJ_G0020944	Scaf4	94	89.345	Mus_caroli
ENSVVUG00000002953	SCAF4	100	89.032	ENSMUSG00000022983	Scaf4	94	89.419	Mus_musculus
ENSVVUG00000002953	SCAF4	98	88.220	MGP_PahariEiJ_G0016649	Scaf4	95	87.277	Mus_pahari
ENSVVUG00000002953	SCAF4	100	83.375	MGP_SPRETEiJ_G0021850	Scaf4	99	85.337	Mus_spretus
ENSVVUG00000002953	SCAF4	100	96.306	ENSMPUG00000001078	SCAF4	99	96.306	Mustela_putorius_furo
ENSVVUG00000002953	SCAF4	99	79.337	ENSMLUG00000011472	SCAF4	77	85.304	Myotis_lucifugus
ENSVVUG00000002953	SCAF4	100	90.018	ENSNGAG00000005214	Scaf4	99	91.013	Nannospalax_galili
ENSVVUG00000002953	SCAF4	100	94.621	ENSNLEG00000003569	SCAF4	99	94.621	Nomascus_leucogenys
ENSVVUG00000002953	SCAF4	79	89.674	ENSOPRG00000007016	SCAF4	77	89.674	Ochotona_princeps
ENSVVUG00000002953	SCAF4	100	89.419	ENSODEG00000002718	SCAF4	99	89.332	Octodon_degus
ENSVVUG00000002953	SCAF4	100	88.256	ENSOCUG00000008336	SCAF4	99	88.344	Oryctolagus_cuniculus
ENSVVUG00000002953	SCAF4	70	95.954	ENSOGAG00000014653	SCAF4	93	95.954	Otolemur_garnettii
ENSVVUG00000002953	SCAF4	100	93.210	ENSOARG00000013894	SCAF4	98	93.386	Ovis_aries
ENSVVUG00000002953	SCAF4	100	94.797	ENSPPAG00000028535	SCAF4	99	94.797	Pan_paniscus
ENSVVUG00000002953	SCAF4	100	97.693	ENSPPRG00000000635	SCAF4	99	97.693	Panthera_pardus
ENSVVUG00000002953	SCAF4	100	94.563	ENSPTIG00000021578	SCAF4	99	94.563	Panthera_tigris_altaica
ENSVVUG00000002953	SCAF4	100	94.797	ENSPTRG00000013848	SCAF4	99	94.797	Pan_troglodytes
ENSVVUG00000002953	SCAF4	100	93.091	ENSPANG00000017332	SCAF4	99	93.252	Papio_anubis
ENSVVUG00000002953	SCAF4	64	62.888	ENSPKIG00000022408	scaf4a	88	65.644	Paramormyrops_kingsleyae
ENSVVUG00000002953	SCAF4	100	77.975	ENSPSIG00000014242	SCAF4	57	84.639	Pelodiscus_sinensis
ENSVVUG00000002953	SCAF4	61	87.936	ENSPCIG00000028183	SCAF4	91	83.393	Phascolarctos_cinereus
ENSVVUG00000002953	SCAF4	53	55.515	ENSPREG00000013510	scaf4b	57	66.837	Poecilia_reticulata
ENSVVUG00000002953	SCAF4	100	94.537	ENSPPYG00000011355	SCAF4	100	94.537	Pongo_abelii
ENSVVUG00000002953	SCAF4	100	83.599	ENSPCAG00000009998	SCAF4	99	81.472	Procavia_capensis
ENSVVUG00000002953	SCAF4	100	94.459	ENSPCOG00000018710	SCAF4	99	94.459	Propithecus_coquereli
ENSVVUG00000002953	SCAF4	100	96.527	ENSPVAG00000005220	SCAF4	99	96.527	Pteropus_vampyrus
ENSVVUG00000002953	SCAF4	76	57.551	ENSPNAG00000016892	scaf4a	58	63.553	Pygocentrus_nattereri
ENSVVUG00000002953	SCAF4	98	85.000	ENSRNOG00000002104	Scaf4	94	83.733	Rattus_norvegicus
ENSVVUG00000002953	SCAF4	100	92.049	ENSRBIG00000040007	SCAF4	61	94.368	Rhinopithecus_bieti
ENSVVUG00000002953	SCAF4	100	94.164	ENSRROG00000029488	SCAF4	99	94.253	Rhinopithecus_roxellana
ENSVVUG00000002953	SCAF4	100	85.829	ENSSHAG00000001581	SCAF4	99	85.027	Sarcophilus_harrisii
ENSVVUG00000002953	SCAF4	88	47.947	ENSSFOG00015006338	scaf4a	54	58.442	Scleropages_formosus
ENSVVUG00000002953	SCAF4	66	59.387	ENSSMAG00000003738	scaf4b	52	72.152	Scophthalmus_maximus
ENSVVUG00000002953	SCAF4	80	52.654	ENSSMAG00000017901	scaf4a	52	52.727	Scophthalmus_maximus
ENSVVUG00000002953	SCAF4	57	61.132	ENSSDUG00000012380	scaf4b	52	70.886	Seriola_dumerili
ENSVVUG00000002953	SCAF4	100	89.701	ENSSARG00000009994	SCAF4	99	90.053	Sorex_araneus
ENSVVUG00000002953	SCAF4	100	91.776	ENSSSCG00000021023	SCAF4	99	91.514	Sus_scrofa
ENSVVUG00000002953	SCAF4	75	71.987	ENSTGUG00000013464	SCAF4	57	85.382	Taeniopygia_guttata
ENSVVUG00000002953	SCAF4	50	58.077	ENSTRUG00000009536	-	63	58.065	Takifugu_rubripes
ENSVVUG00000002953	SCAF4	100	95.637	ENSTTRG00000010963	SCAF4	99	95.637	Tursiops_truncatus
ENSVVUG00000002953	SCAF4	100	96.610	ENSUAMG00000008860	SCAF4	99	96.610	Ursus_americanus
ENSVVUG00000002953	SCAF4	100	95.629	ENSUMAG00000016962	SCAF4	100	95.629	Ursus_maritimus
ENSVVUG00000002953	SCAF4	99	55.867	ENSXETG00000007351	scaf4	61	65.598	Xenopus_tropicalis