EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000004434 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: nuclease-sensitive element-binding protein 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 1338 bases
Position: chrNBDQ01000080.1:7743157-7744494
Accession: 112928235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000005687	CSD	PF00313.22	2.3e-12	1	1
ENSVVUP00000005708	CSD	PF00313.22	3.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000007612	-	1248	-	ENSVVUP00000005687	290 (aa)	XP_025865653	UPI000DF68775
ENSVVUT00000007642	-	1196	-	ENSVVUP00000005708	367 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000004434's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000004434's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000004434	-	68	55.310	ENSVVUG00000006706	-	80	60.700
ENSVVUG00000004434	-	80	42.491	ENSVVUG00000004956	YBX3	100	40.351

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000004434	-	97	78.778	ENSANAG00000025655	-	93	78.457	Aotus_nancymaae
ENSVVUG00000004434	-	97	69.427	ENSTSYG00000027684	-	100	69.427	Carlito_syrichta
ENSVVUG00000004434	-	87	91.304	ENSECAG00000023284	-	75	91.304	Equus_caballus
ENSVVUG00000004434	-	99	73.567	ENSGGOG00000026071	-	96	74.841	Gorilla_gorilla
ENSVVUG00000004434	-	88	76.786	ENSGGOG00000023840	-	98	76.703	Gorilla_gorilla
ENSVVUG00000004434	-	98	72.381	ENSSTOG00000024314	-	98	72.698	Ictidomys_tridecemlineatus
ENSVVUG00000004434	-	80	74.713	ENSMAUG00000016728	-	73	83.636	Mesocricetus_auratus
ENSVVUG00000004434	-	100	71.028	ENSMICG00000044390	-	100	68.847	Microcebus_murinus
ENSVVUG00000004434	-	70	81.702	ENSMICG00000047992	-	98	81.624	Microcebus_murinus
ENSVVUG00000004434	-	74	79.918	ENSMOCG00000000975	-	87	79.681	Microtus_ochrogaster
ENSVVUG00000004434	-	73	83.607	ENSOGAG00000006784	-	99	85.656	Otolemur_garnettii
ENSVVUG00000004434	-	96	76.375	ENSPPAG00000027455	-	100	76.375	Pan_paniscus
ENSVVUG00000004434	-	99	62.145	ENSSSCG00000008860	-	99	61.059	Sus_scrofa