EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000004436 (Gene tree)
Gene ID: -
Gene Symbol: SLIRP
Alias: C14orf156|DC50
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 8718 bases
Position: chrNBDQ01000022.1:19055252-19063969
Accession: 112918313
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000005672	RRM_1	PF00076.22	9.3e-14	1	1
ENSVVUP00000005676	RRM_1	PF00076.22	1.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000007598	SLIRP-201	1161	-	ENSVVUP00000005672	111 (aa)	XP_025852220	UPI000DF6B9AE
ENSVVUT00000007602	SLIRP-202	1221	-	ENSVVUP00000005676	131 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000004436's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000004436's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000004436	SLIRP	74	30.233	ENSVVUG00000003364	-	71	30.233
ENSVVUG00000004436	SLIRP	87	33.846	ENSVVUG00000001047	-	52	33.846

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000004436	SLIRP	85	74.468	ENSG00000119705	SLIRP	97	78.378	Homo_sapiens
ENSVVUG00000004436	SLIRP	68	59.211	ENSAPOG00000001298	slirp	76	59.211	Acanthochromis_polyacanthus
ENSVVUG00000004436	SLIRP	82	85.714	ENSAMEG00000003975	SLIRP	84	88.158	Ailuropoda_melanoleuca
ENSVVUG00000004436	SLIRP	79	53.933	ENSACIG00000023083	slirp	85	53.933	Amphilophus_citrinellus
ENSVVUG00000004436	SLIRP	81	54.945	ENSAOCG00000006342	slirp	89	54.945	Amphiprion_ocellaris
ENSVVUG00000004436	SLIRP	81	54.945	ENSAPEG00000015917	slirp	89	54.945	Amphiprion_percula
ENSVVUG00000004436	SLIRP	81	54.945	ENSAPEG00000015719	-	90	54.945	Amphiprion_percula
ENSVVUG00000004436	SLIRP	67	54.054	ENSATEG00000013525	slirp	74	54.054	Anabas_testudineus
ENSVVUG00000004436	SLIRP	79	51.136	ENSAMXG00000018693	slirp	88	51.136	Astyanax_mexicanus
ENSVVUG00000004436	SLIRP	100	75.676	ENSCJAG00000016946	SLIRP	84	82.051	Callithrix_jacchus
ENSVVUG00000004436	SLIRP	100	90.090	ENSCAFG00020015876	-	86	92.708	Canis_lupus_dingo
ENSVVUG00000004436	SLIRP	100	76.577	ENSCCAG00000030130	SLIRP	85	80.000	Cebus_capucinus
ENSVVUG00000004436	SLIRP	100	72.072	ENSCATG00000036327	SLIRP	83	79.221	Cercocebus_atys
ENSVVUG00000004436	SLIRP	100	74.775	ENSCSAG00000011736	SLIRP	86	73.958	Chlorocebus_sabaeus
ENSVVUG00000004436	SLIRP	63	58.571	ENSCPBG00000026327	SLIRP	71	60.000	Chrysemys_picta_bellii
ENSVVUG00000004436	SLIRP	67	82.432	ENSCANG00000032892	SLIRP	85	75.904	Colobus_angolensis_palliatus
ENSVVUG00000004436	SLIRP	100	68.468	ENSCGRG00001024068	Slirp	83	70.652	Cricetulus_griseus_chok1gshd
ENSVVUG00000004436	SLIRP	100	68.468	ENSCGRG00000017440	Slirp	83	70.652	Cricetulus_griseus_crigri
ENSVVUG00000004436	SLIRP	81	50.000	ENSCSEG00000015766	slirp	79	55.128	Cynoglossus_semilaevis
ENSVVUG00000004436	SLIRP	73	53.086	ENSCVAG00000012504	slirp	67	61.765	Cyprinodon_variegatus
ENSVVUG00000004436	SLIRP	68	56.000	ENSDARG00000097753	slirp	72	56.757	Danio_rerio
ENSVVUG00000004436	SLIRP	80	70.787	ENSDNOG00000007721	SLIRP	80	70.787	Dasypus_novemcinctus
ENSVVUG00000004436	SLIRP	98	74.312	ENSDORG00000012379	Slirp	85	77.660	Dipodomys_ordii
ENSVVUG00000004436	SLIRP	90	67.000	ENSETEG00000010345	SLIRP	86	66.667	Echinops_telfairi
ENSVVUG00000004436	SLIRP	100	84.685	ENSEASG00005020193	SLIRP	86	85.417	Equus_asinus_asinus
ENSVVUG00000004436	SLIRP	83	66.304	ENSEEUG00000007257	SLIRP	90	66.304	Erinaceus_europaeus
ENSVVUG00000004436	SLIRP	77	52.326	ENSELUG00000016800	slirp	84	52.326	Esox_lucius
ENSVVUG00000004436	SLIRP	79	84.091	ENSFCAG00000036326	SLIRP	72	88.732	Felis_catus
ENSVVUG00000004436	SLIRP	64	52.113	ENSFALG00000012583	SLIRP	75	50.633	Ficedula_albicollis
ENSVVUG00000004436	SLIRP	97	68.142	ENSFDAG00000008347	SLIRP	79	74.157	Fukomys_damarensis
ENSVVUG00000004436	SLIRP	59	56.716	ENSFHEG00000004709	slirp	73	56.716	Fundulus_heteroclitus
ENSVVUG00000004436	SLIRP	78	52.809	ENSGMOG00000016948	slirp	85	52.809	Gadus_morhua
ENSVVUG00000004436	SLIRP	67	48.649	ENSGALG00000031238	SLIRP	71	52.239	Gallus_gallus
ENSVVUG00000004436	SLIRP	82	54.348	ENSGAFG00000010998	slirp	89	54.348	Gambusia_affinis
ENSVVUG00000004436	SLIRP	65	55.556	ENSGACG00000020137	slirp	84	55.556	Gasterosteus_aculeatus
ENSVVUG00000004436	SLIRP	81	54.444	ENSGAGG00000009953	SLIRP	62	54.444	Gopherus_agassizii
ENSVVUG00000004436	SLIRP	85	73.404	ENSGGOG00000011059	-	83	77.922	Gorilla_gorilla
ENSVVUG00000004436	SLIRP	100	67.568	ENSHGLG00000018491	SLIRP	85	69.149	Heterocephalus_glaber_female
ENSVVUG00000004436	SLIRP	100	67.568	ENSHGLG00100014153	SLIRP	85	69.149	Heterocephalus_glaber_male
ENSVVUG00000004436	SLIRP	81	51.111	ENSHCOG00000006795	slirp	90	51.111	Hippocampus_comes
ENSVVUG00000004436	SLIRP	68	56.579	ENSIPUG00000010214	SLIRP	76	56.579	Ictalurus_punctatus
ENSVVUG00000004436	SLIRP	90	82.000	ENSSTOG00000034316	SLIRP	86	83.333	Ictidomys_tridecemlineatus
ENSVVUG00000004436	SLIRP	65	45.833	ENSKMAG00000002038	slirp	69	45.833	Kryptolebias_marmoratus
ENSVVUG00000004436	SLIRP	68	56.579	ENSLBEG00000007564	slirp	76	56.579	Labrus_bergylta
ENSVVUG00000004436	SLIRP	82	52.747	ENSLACG00000013434	SLIRP	87	52.747	Latimeria_chalumnae
ENSVVUG00000004436	SLIRP	100	72.973	ENSMFAG00000042960	SLIRP	83	79.221	Macaca_fascicularis
ENSVVUG00000004436	SLIRP	100	73.874	ENSMMUG00000029256	SLIRP	83	79.221	Macaca_mulatta
ENSVVUG00000004436	SLIRP	100	72.973	ENSMNEG00000028921	SLIRP	83	79.221	Macaca_nemestrina
ENSVVUG00000004436	SLIRP	79	80.682	ENSMLEG00000043644	SLIRP	85	74.699	Mandrillus_leucophaeus
ENSVVUG00000004436	SLIRP	78	56.818	ENSMZEG00005004617	slirp	88	55.556	Maylandia_zebra
ENSVVUG00000004436	SLIRP	100	73.874	ENSMAUG00000003857	Slirp	83	77.174	Mesocricetus_auratus
ENSVVUG00000004436	SLIRP	100	69.369	ENSMICG00000012080	SLIRP	86	70.833	Microcebus_murinus
ENSVVUG00000004436	SLIRP	98	75.229	ENSMOCG00000016019	Slirp	83	78.495	Microtus_ochrogaster
ENSVVUG00000004436	SLIRP	72	56.790	ENSMMOG00000018268	slirp	88	53.409	Mola_mola
ENSVVUG00000004436	SLIRP	63	61.429	ENSMODG00000005207	-	99	62.857	Monodelphis_domestica
ENSVVUG00000004436	SLIRP	81	52.222	ENSMALG00000012581	slirp	90	52.222	Monopterus_albus
ENSVVUG00000004436	SLIRP	97	78.704	MGP_CAROLIEiJ_G0017995	Slirp	85	83.696	Mus_caroli
ENSVVUG00000004436	SLIRP	98	78.899	ENSMUSG00000021040	Slirp	83	83.871	Mus_musculus
ENSVVUG00000004436	SLIRP	98	78.899	MGP_SPRETEiJ_G0018840	Slirp	83	83.871	Mus_spretus
ENSVVUG00000004436	SLIRP	86	80.000	ENSMLUG00000024998	-	86	80.000	Myotis_lucifugus
ENSVVUG00000004436	SLIRP	90	79.000	ENSMLUG00000029544	-	85	82.105	Myotis_lucifugus
ENSVVUG00000004436	SLIRP	97	73.148	ENSNGAG00000016363	Slirp	89	76.344	Nannospalax_galili
ENSVVUG00000004436	SLIRP	93	65.049	ENSNLEG00000027238	-	89	69.231	Nomascus_leucogenys
ENSVVUG00000004436	SLIRP	100	68.468	ENSNLEG00000032459	-	84	73.077	Nomascus_leucogenys
ENSVVUG00000004436	SLIRP	98	75.229	ENSODEG00000012580	SLIRP	84	76.596	Octodon_degus
ENSVVUG00000004436	SLIRP	78	55.172	ENSONIG00000011692	slirp	88	53.933	Oreochromis_niloticus
ENSVVUG00000004436	SLIRP	80	61.798	ENSOANG00000022366	SLIRP	67	68.919	Ornithorhynchus_anatinus
ENSVVUG00000004436	SLIRP	81	53.846	ENSORLG00000010761	slirp	68	53.846	Oryzias_latipes
ENSVVUG00000004436	SLIRP	81	54.945	ENSORLG00020022188	slirp	88	54.945	Oryzias_latipes_hni
ENSVVUG00000004436	SLIRP	100	48.214	ENSORLG00015020171	slirp	87	53.846	Oryzias_latipes_hsok
ENSVVUG00000004436	SLIRP	81	54.945	ENSOMEG00000019321	slirp	88	54.945	Oryzias_melastigma
ENSVVUG00000004436	SLIRP	86	70.833	ENSPPAG00000040710	-	83	77.922	Pan_paniscus
ENSVVUG00000004436	SLIRP	79	84.091	ENSPPRG00000014350	SLIRP	72	88.732	Panthera_pardus
ENSVVUG00000004436	SLIRP	79	84.091	ENSPTIG00000014196	SLIRP	72	88.732	Panthera_tigris_altaica
ENSVVUG00000004436	SLIRP	85	73.404	ENSPTRG00000030691	SLIRP	83	77.922	Pan_troglodytes
ENSVVUG00000004436	SLIRP	100	73.874	ENSPANG00000026323	SLIRP	83	80.519	Papio_anubis
ENSVVUG00000004436	SLIRP	64	50.000	ENSPKIG00000008831	slirp	73	50.000	Paramormyrops_kingsleyae
ENSVVUG00000004436	SLIRP	62	63.768	ENSPMGG00000010541	slirp	78	66.176	Periophthalmus_magnuspinnatus
ENSVVUG00000004436	SLIRP	88	70.707	ENSPEMG00000013234	Slirp	83	70.588	Peromyscus_maniculatus_bairdii
ENSVVUG00000004436	SLIRP	61	48.529	ENSPMAG00000009355	slirp	76	48.529	Petromyzon_marinus
ENSVVUG00000004436	SLIRP	80	53.933	ENSPCIG00000026842	-	73	63.235	Phascolarctos_cinereus
ENSVVUG00000004436	SLIRP	82	52.174	ENSPFOG00000006758	slirp	77	58.442	Poecilia_formosa
ENSVVUG00000004436	SLIRP	82	53.261	ENSPLAG00000011140	slirp	89	53.261	Poecilia_latipinna
ENSVVUG00000004436	SLIRP	82	52.174	ENSPMEG00000019535	slirp	77	58.442	Poecilia_mexicana
ENSVVUG00000004436	SLIRP	68	58.442	ENSPREG00000011673	slirp	77	58.442	Poecilia_reticulata
ENSVVUG00000004436	SLIRP	98	70.642	ENSPPYG00000006030	SLIRP	83	70.213	Pongo_abelii
ENSVVUG00000004436	SLIRP	100	71.171	ENSPCOG00000015159	SLIRP	86	72.917	Propithecus_coquereli
ENSVVUG00000004436	SLIRP	81	58.889	ENSPNAG00000008633	slirp	90	58.889	Pygocentrus_nattereri
ENSVVUG00000004436	SLIRP	90	74.000	ENSRBIG00000032222	-	83	79.221	Rhinopithecus_bieti
ENSVVUG00000004436	SLIRP	69	79.221	ENSRBIG00000032998	-	77	72.289	Rhinopithecus_bieti
ENSVVUG00000004436	SLIRP	88	69.388	ENSRBIG00000035817	-	85	70.213	Rhinopithecus_bieti
ENSVVUG00000004436	SLIRP	77	81.395	ENSRBIG00000031396	-	79	75.949	Rhinopithecus_bieti
ENSVVUG00000004436	SLIRP	77	82.558	ENSRROG00000035604	-	79	77.215	Rhinopithecus_roxellana
ENSVVUG00000004436	SLIRP	79	80.682	ENSRROG00000017133	-	82	78.481	Rhinopithecus_roxellana
ENSVVUG00000004436	SLIRP	100	74.775	ENSRROG00000036656	-	83	79.221	Rhinopithecus_roxellana
ENSVVUG00000004436	SLIRP	93	72.816	ENSRROG00000041312	-	84	71.591	Rhinopithecus_roxellana
ENSVVUG00000004436	SLIRP	79	77.273	ENSSBOG00000020014	SLIRP	82	80.263	Saimiri_boliviensis_boliviensis
ENSVVUG00000004436	SLIRP	63	62.857	ENSSFOG00015011165	slirp	71	62.857	Scleropages_formosus
ENSVVUG00000004436	SLIRP	99	40.000	ENSSMAG00000012930	slirp	87	42.697	Scophthalmus_maximus
ENSVVUG00000004436	SLIRP	81	54.444	ENSSDUG00000021883	slirp	58	54.444	Seriola_dumerili
ENSVVUG00000004436	SLIRP	81	54.444	ENSSLDG00000023136	slirp	80	54.444	Seriola_lalandi_dorsalis
ENSVVUG00000004436	SLIRP	65	52.778	ENSSPUG00000009346	SLIRP	73	52.778	Sphenodon_punctatus
ENSVVUG00000004436	SLIRP	67	54.054	ENSSPAG00000013477	slirp	74	54.054	Stegastes_partitus
ENSVVUG00000004436	SLIRP	100	77.477	ENSSSCG00000028167	SLIRP	86	81.250	Sus_scrofa
ENSVVUG00000004436	SLIRP	77	44.186	ENSTGUG00000012337	SLIRP	80	47.059	Taeniopygia_guttata
ENSVVUG00000004436	SLIRP	68	53.947	ENSTRUG00000020127	slirp	88	48.889	Takifugu_rubripes
ENSVVUG00000004436	SLIRP	100	84.685	ENSUAMG00000022445	SLIRP	86	85.417	Ursus_americanus
ENSVVUG00000004436	SLIRP	100	85.586	ENSUMAG00000007166	SLIRP	86	86.458	Ursus_maritimus
ENSVVUG00000004436	SLIRP	100	78.378	ENSVPAG00000001781	SLIRP	86	80.208	Vicugna_pacos
ENSVVUG00000004436	SLIRP	64	57.746	ENSXETG00000030343	SLIRP	80	59.155	Xenopus_tropicalis
ENSVVUG00000004436	SLIRP	82	51.087	ENSXCOG00000009422	slirp	89	51.087	Xiphophorus_couchianus
ENSVVUG00000004436	SLIRP	82	52.174	ENSXMAG00000015655	slirp	89	52.174	Xiphophorus_maculatus