EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000004522 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 1229 bases
Position: chrNBDQ01000060.1:6569255-6570483
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000005773	zf-CCCH	PF00642.24	1.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000007744	-	1128	-	ENSVVUP00000005773	297 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000004522's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000004522's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000004522	-	83	72.619	ENSVVUG00000011662	-	71	73.016

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000004522	-	83	73.387	ENSG00000125352	RNF113A	71	69.758	Homo_sapiens
ENSVVUG00000004522	-	82	57.600	ENSG00000139797	RNF113B	72	53.200	Homo_sapiens
ENSVVUG00000004522	-	77	58.874	ENSAPOG00000017510	rnf113a	57	65.079	Acanthochromis_polyacanthus
ENSVVUG00000004522	-	83	72.691	ENSAMEG00000019845	-	71	73.092	Ailuropoda_melanoleuca
ENSVVUG00000004522	-	82	53.086	ENSACIG00000007458	rnf113a	53	70.968	Amphilophus_citrinellus
ENSVVUG00000004522	-	77	59.389	ENSAOCG00000003485	rnf113a	57	65.775	Amphiprion_ocellaris
ENSVVUG00000004522	-	77	59.389	ENSAPEG00000001084	rnf113a	58	65.775	Amphiprion_percula
ENSVVUG00000004522	-	82	56.557	ENSATEG00000022950	rnf113a	57	64.362	Anabas_testudineus
ENSVVUG00000004522	-	52	77.419	ENSAPLG00000012510	-	57	77.419	Anas_platyrhynchos
ENSVVUG00000004522	-	79	62.869	ENSACAG00000012485	-	61	66.667	Anolis_carolinensis
ENSVVUG00000004522	-	83	70.968	ENSANAG00000013925	-	71	68.145	Aotus_nancymaae
ENSVVUG00000004522	-	82	72.541	ENSANAG00000024332	-	73	68.952	Aotus_nancymaae
ENSVVUG00000004522	-	82	58.704	ENSANAG00000020431	RNF113B	72	57.895	Aotus_nancymaae
ENSVVUG00000004522	-	82	55.556	ENSACLG00000025256	rnf113a	52	72.258	Astatotilapia_calliptera
ENSVVUG00000004522	-	80	53.975	ENSAMXG00000011273	rnf113a	57	63.636	Astyanax_mexicanus
ENSVVUG00000004522	-	83	71.371	ENSBTAG00000006034	RNF113A	71	68.952	Bos_taurus
ENSVVUG00000004522	-	83	68.651	ENSBTAG00000008684	-	72	66.667	Bos_taurus
ENSVVUG00000004522	-	83	72.581	ENSCJAG00000022327	RNF113A	71	69.355	Callithrix_jacchus
ENSVVUG00000004522	-	82	58.537	ENSCJAG00000004501	RNF113B	50	68.712	Callithrix_jacchus
ENSVVUG00000004522	-	83	72.619	ENSCAFG00000018430	-	71	73.016	Canis_familiaris
ENSVVUG00000004522	-	83	73.228	ENSCAFG00000018373	-	71	73.622	Canis_familiaris
ENSVVUG00000004522	-	82	73.600	ENSCAFG00020020280	-	71	74.409	Canis_lupus_dingo
ENSVVUG00000004522	-	83	72.619	ENSCAFG00020004044	-	71	73.016	Canis_lupus_dingo
ENSVVUG00000004522	-	83	69.231	ENSCHIG00000015616	-	71	65.992	Capra_hircus
ENSVVUG00000004522	-	83	71.774	ENSCHIG00000018820	-	71	69.200	Capra_hircus
ENSVVUG00000004522	-	83	72.289	ENSTSYG00000001308	RNF113A	71	69.076	Carlito_syrichta
ENSVVUG00000004522	-	83	71.660	ENSCPOG00000038517	-	72	68.421	Cavia_porcellus
ENSVVUG00000004522	-	83	72.581	ENSCCAG00000013617	RNF113A	71	69.355	Cebus_capucinus
ENSVVUG00000004522	-	82	60.324	ENSCCAG00000021327	RNF113B	72	60.081	Cebus_capucinus
ENSVVUG00000004522	-	83	74.194	ENSCATG00000002702	RNF113A	71	70.565	Cercocebus_atys
ENSVVUG00000004522	-	83	72.000	ENSCLAG00000017479	-	71	68.000	Chinchilla_lanigera
ENSVVUG00000004522	-	82	57.490	ENSCSAG00000000222	RNF113B	69	53.200	Chlorocebus_sabaeus
ENSVVUG00000004522	-	83	59.677	ENSCSAG00000019472	-	70	54.980	Chlorocebus_sabaeus
ENSVVUG00000004522	-	82	72.428	ENSCHOG00000008711	-	89	69.959	Choloepus_hoffmanni
ENSVVUG00000004522	-	79	65.957	ENSCPBG00000026980	-	59	69.634	Chrysemys_picta_bellii
ENSVVUG00000004522	-	74	56.951	ENSCING00000009197	-	58	60.526	Ciona_intestinalis
ENSVVUG00000004522	-	64	58.947	ENSCSAVG00000006210	-	58	59.474	Ciona_savignyi
ENSVVUG00000004522	-	82	57.377	ENSCANG00000041552	RNF113B	72	53.441	Colobus_angolensis_palliatus
ENSVVUG00000004522	-	83	74.194	ENSCANG00000037715	RNF113A	71	70.565	Colobus_angolensis_palliatus
ENSVVUG00000004522	-	83	72.470	ENSCGRG00001002251	Rnf113a1	70	69.636	Cricetulus_griseus_chok1gshd
ENSVVUG00000004522	-	82	69.672	ENSCGRG00000016675	Rnf113a2	72	64.800	Cricetulus_griseus_crigri
ENSVVUG00000004522	-	83	72.065	ENSCGRG00000019441	Rnf113a1	70	69.231	Cricetulus_griseus_crigri
ENSVVUG00000004522	-	82	56.557	ENSCVAG00000011305	rnf113a	57	63.830	Cyprinodon_variegatus
ENSVVUG00000004522	-	82	60.082	ENSDARG00000037930	rnf113a	71	59.259	Danio_rerio
ENSVVUG00000004522	-	82	67.623	ENSDORG00000027624	Rnf113a2	72	64.000	Dipodomys_ordii
ENSVVUG00000004522	-	75	49.554	FBgn0038772	mdlc	51	54.891	Drosophila_melanogaster
ENSVVUG00000004522	-	83	68.826	ENSETEG00000018346	-	71	67.206	Echinops_telfairi
ENSVVUG00000004522	-	78	57.328	ENSEBUG00000016079	rnf113a	56	65.775	Eptatretus_burgeri
ENSVVUG00000004522	-	83	72.581	ENSEASG00005010538	-	71	68.952	Equus_asinus_asinus
ENSVVUG00000004522	-	83	71.371	ENSECAG00000004638	-	76	68.952	Equus_caballus
ENSVVUG00000004522	-	83	72.177	ENSECAG00000003934	-	71	69.758	Equus_caballus
ENSVVUG00000004522	-	82	56.327	ENSELUG00000020657	rnf113a	71	54.694	Esox_lucius
ENSVVUG00000004522	-	82	71.605	ENSFCAG00000028962	-	71	70.850	Felis_catus
ENSVVUG00000004522	-	83	72.470	ENSFCAG00000025700	-	71	72.874	Felis_catus
ENSVVUG00000004522	-	83	71.660	ENSFCAG00000024392	-	69	72.065	Felis_catus
ENSVVUG00000004522	-	70	66.184	ENSFALG00000004633	-	63	68.586	Ficedula_albicollis
ENSVVUG00000004522	-	77	55.652	ENSFHEG00000023305	rnf113a	57	63.830	Fundulus_heteroclitus
ENSVVUG00000004522	-	77	59.130	ENSGMOG00000004541	rnf113a	55	66.667	Gadus_morhua
ENSVVUG00000004522	-	79	63.830	ENSGALG00000000538	RNF113A	53	73.913	Gallus_gallus
ENSVVUG00000004522	-	78	58.621	ENSGAFG00000011863	rnf113a	57	65.079	Gambusia_affinis
ENSVVUG00000004522	-	77	58.515	ENSGACG00000009738	rnf113a	56	64.706	Gasterosteus_aculeatus
ENSVVUG00000004522	-	79	65.532	ENSGAGG00000020490	-	59	69.634	Gopherus_agassizii
ENSVVUG00000004522	-	83	73.387	ENSGGOG00000002324	RNF113A	71	69.758	Gorilla_gorilla
ENSVVUG00000004522	-	82	58.400	ENSGGOG00000023052	RNF113B	72	54.000	Gorilla_gorilla
ENSVVUG00000004522	-	82	55.556	ENSHBUG00000008626	rnf113a	57	65.054	Haplochromis_burtoni
ENSVVUG00000004522	-	83	71.255	ENSHGLG00000019571	-	71	68.016	Heterocephalus_glaber_female
ENSVVUG00000004522	-	83	70.635	ENSHGLG00100019582	-	71	66.667	Heterocephalus_glaber_male
ENSVVUG00000004522	-	77	57.205	ENSHCOG00000003421	rnf113a	57	63.102	Hippocampus_comes
ENSVVUG00000004522	-	77	57.391	ENSIPUG00000013431	RNF113A	57	65.775	Ictalurus_punctatus
ENSVVUG00000004522	-	83	72.984	ENSSTOG00000019866	-	71	68.952	Ictidomys_tridecemlineatus
ENSVVUG00000004522	-	77	58.515	ENSKMAG00000009830	rnf113a	57	63.830	Kryptolebias_marmoratus
ENSVVUG00000004522	-	82	56.790	ENSLBEG00000004627	rnf113a	57	65.241	Labrus_bergylta
ENSVVUG00000004522	-	81	58.750	ENSLACG00000013178	rnf113a	57	66.667	Latimeria_chalumnae
ENSVVUG00000004522	-	80	57.500	ENSLOCG00000011785	rnf113a	57	65.241	Lepisosteus_oculatus
ENSVVUG00000004522	-	83	71.255	ENSLAFG00000013906	-	71	67.611	Loxodonta_africana
ENSVVUG00000004522	-	83	74.194	ENSMFAG00000018472	RNF113A	71	70.565	Macaca_fascicularis
ENSVVUG00000004522	-	83	74.194	ENSMMUG00000020223	RNF113A	71	70.565	Macaca_mulatta
ENSVVUG00000004522	-	83	74.194	ENSMNEG00000019778	RNF113A	71	70.565	Macaca_nemestrina
ENSVVUG00000004522	-	51	67.105	ENSMLEG00000038757	RNF113B	51	67.105	Mandrillus_leucophaeus
ENSVVUG00000004522	-	83	74.194	ENSMLEG00000020750	RNF113A	71	70.565	Mandrillus_leucophaeus
ENSVVUG00000004522	-	82	55.144	ENSMAMG00000021895	rnf113a	57	63.492	Mastacembelus_armatus
ENSVVUG00000004522	-	82	55.556	ENSMZEG00005023086	rnf113a	57	65.054	Maylandia_zebra
ENSVVUG00000004522	-	67	67.337	ENSMGAG00000001753	-	65	67.708	Meleagris_gallopavo
ENSVVUG00000004522	-	83	72.065	ENSMICG00000038084	-	71	68.421	Microcebus_murinus
ENSVVUG00000004522	-	83	72.800	ENSMICG00000001750	-	71	69.200	Microcebus_murinus
ENSVVUG00000004522	-	83	69.880	ENSMOCG00000005370	-	69	67.068	Microtus_ochrogaster
ENSVVUG00000004522	-	77	56.710	ENSMMOG00000016954	rnf113a	59	61.340	Mola_mola
ENSVVUG00000004522	-	71	55.714	ENSMALG00000007938	rnf113a	53	62.275	Monopterus_albus
ENSVVUG00000004522	-	82	70.902	MGP_CAROLIEiJ_G0017943	Rnf113a2	72	65.600	Mus_caroli
ENSVVUG00000004522	-	82	70.902	ENSMUSG00000098134	Rnf113a2	72	65.600	Mus_musculus
ENSVVUG00000004522	-	83	71.660	ENSMUSG00000036537	Rnf113a1	71	68.826	Mus_musculus
ENSVVUG00000004522	-	82	70.902	MGP_PahariEiJ_G0029702	Rnf113a2	72	65.600	Mus_pahari
ENSVVUG00000004522	-	83	70.445	MGP_PahariEiJ_G0031547	Rnf113a1	71	67.611	Mus_pahari
ENSVVUG00000004522	-	83	71.660	MGP_SPRETEiJ_G0034156	Rnf113a1	71	68.826	Mus_spretus
ENSVVUG00000004522	-	82	70.902	MGP_SPRETEiJ_G0018788	Rnf113a2	72	65.600	Mus_spretus
ENSVVUG00000004522	-	83	72.000	ENSMPUG00000019358	-	71	71.200	Mustela_putorius_furo
ENSVVUG00000004522	-	82	70.565	ENSMLUG00000016812	-	71	66.270	Myotis_lucifugus
ENSVVUG00000004522	-	82	70.445	ENSMLUG00000010856	-	72	67.331	Myotis_lucifugus
ENSVVUG00000004522	-	82	55.556	ENSNBRG00000004314	rnf113a	57	65.054	Neolamprologus_brichardi
ENSVVUG00000004522	-	82	57.317	ENSNLEG00000007844	RNF113B	72	53.012	Nomascus_leucogenys
ENSVVUG00000004522	-	83	72.984	ENSNLEG00000018333	RNF113A	71	69.355	Nomascus_leucogenys
ENSVVUG00000004522	-	82	64.372	ENSMEUG00000001855	-	73	62.753	Notamacropus_eugenii
ENSVVUG00000004522	-	82	55.556	ENSONIG00000000741	rnf113a	57	65.054	Oreochromis_niloticus
ENSVVUG00000004522	-	80	65.966	ENSOANG00000002592	-	55	69.519	Ornithorhynchus_anatinus
ENSVVUG00000004522	-	83	71.315	ENSOCUG00000016207	-	71	68.924	Oryctolagus_cuniculus
ENSVVUG00000004522	-	78	58.621	ENSORLG00000002442	rnf113a	57	64.894	Oryzias_latipes
ENSVVUG00000004522	-	78	58.190	ENSORLG00020011512	rnf113a	54	68.452	Oryzias_latipes_hni
ENSVVUG00000004522	-	78	58.621	ENSORLG00015004382	rnf113a	57	64.894	Oryzias_latipes_hsok
ENSVVUG00000004522	-	82	57.377	ENSOMEG00000020197	rnf113a	71	54.918	Oryzias_melastigma
ENSVVUG00000004522	-	83	70.445	ENSOGAG00000011638	RNF113B	71	65.587	Otolemur_garnettii
ENSVVUG00000004522	-	83	71.486	ENSOGAG00000031602	RNF113A	71	68.273	Otolemur_garnettii
ENSVVUG00000004522	-	83	71.774	ENSOARG00000009771	-	71	69.200	Ovis_aries
ENSVVUG00000004522	-	83	69.355	ENSOARG00000015294	-	71	66.802	Ovis_aries
ENSVVUG00000004522	-	82	58.400	ENSPPAG00000040641	RNF113B	72	54.000	Pan_paniscus
ENSVVUG00000004522	-	83	73.387	ENSPPAG00000009537	RNF113A	71	69.758	Pan_paniscus
ENSVVUG00000004522	-	83	72.470	ENSPPRG00000011512	-	71	72.874	Panthera_pardus
ENSVVUG00000004522	-	82	71.193	ENSPPRG00000020640	-	71	70.850	Panthera_pardus
ENSVVUG00000004522	-	83	72.470	ENSPTIG00000007986	-	71	72.874	Panthera_tigris_altaica
ENSVVUG00000004522	-	83	73.387	ENSPTRG00000022231	RNF113A	71	69.758	Pan_troglodytes
ENSVVUG00000004522	-	82	58.400	ENSPTRG00000005987	RNF113B	72	54.000	Pan_troglodytes
ENSVVUG00000004522	-	83	74.194	ENSPANG00000011522	RNF113A	71	70.565	Papio_anubis
ENSVVUG00000004522	-	82	57.787	ENSPKIG00000016796	rnf113a	57	64.706	Paramormyrops_kingsleyae
ENSVVUG00000004522	-	68	69.652	ENSPSIG00000012676	-	66	69.271	Pelodiscus_sinensis
ENSVVUG00000004522	-	77	58.515	ENSPMGG00000009668	rnf113a	57	64.171	Periophthalmus_magnuspinnatus
ENSVVUG00000004522	-	83	71.255	ENSPEMG00000002490	Rnf113a1	71	68.421	Peromyscus_maniculatus_bairdii
ENSVVUG00000004522	-	65	62.371	ENSPMAG00000005184	rnf113a	62	63.636	Petromyzon_marinus
ENSVVUG00000004522	-	82	67.470	ENSPCIG00000028916	-	71	64.516	Phascolarctos_cinereus
ENSVVUG00000004522	-	78	57.328	ENSPFOG00000014248	rnf113a	57	64.211	Poecilia_formosa
ENSVVUG00000004522	-	78	57.328	ENSPLAG00000010435	rnf113a	57	64.211	Poecilia_latipinna
ENSVVUG00000004522	-	78	58.369	ENSPMEG00000010641	rnf113a	57	64.737	Poecilia_mexicana
ENSVVUG00000004522	-	78	58.190	ENSPREG00000009900	rnf113a	57	64.550	Poecilia_reticulata
ENSVVUG00000004522	-	82	57.490	ENSPPYG00000005460	RNF113B	73	55.870	Pongo_abelii
ENSVVUG00000004522	-	83	72.984	ENSPPYG00000020676	RNF113A	71	69.355	Pongo_abelii
ENSVVUG00000004522	-	83	70.281	ENSPCAG00000014633	-	70	69.231	Procavia_capensis
ENSVVUG00000004522	-	83	69.200	ENSPCOG00000005671	-	70	65.600	Propithecus_coquereli
ENSVVUG00000004522	-	82	55.556	ENSPNYG00000013863	rnf113a	57	65.054	Pundamilia_nyererei
ENSVVUG00000004522	-	80	55.230	ENSPNAG00000017428	rnf113a	57	66.138	Pygocentrus_nattereri
ENSVVUG00000004522	-	83	71.084	ENSRNOG00000034040	LOC108348079	71	68.826	Rattus_norvegicus
ENSVVUG00000004522	-	83	71.084	ENSRNOG00000059412	Rnf113a1	71	68.826	Rattus_norvegicus
ENSVVUG00000004522	-	82	56.680	ENSRBIG00000036094	RNF113B	72	54.000	Rhinopithecus_bieti
ENSVVUG00000004522	-	83	73.790	ENSRBIG00000017389	RNF113A	71	70.565	Rhinopithecus_bieti
ENSVVUG00000004522	-	82	56.275	ENSRROG00000045661	RNF113B	72	53.600	Rhinopithecus_roxellana
ENSVVUG00000004522	-	83	73.790	ENSRROG00000012149	RNF113A	71	70.565	Rhinopithecus_roxellana
ENSVVUG00000004522	-	83	72.581	ENSSBOG00000017704	RNF113A	71	69.355	Saimiri_boliviensis_boliviensis
ENSVVUG00000004522	-	82	56.911	ENSSBOG00000029719	RNF113B	72	59.919	Saimiri_boliviensis_boliviensis
ENSVVUG00000004522	-	82	64.919	ENSSHAG00000008839	-	70	65.323	Sarcophilus_harrisii
ENSVVUG00000004522	-	81	56.432	ENSSFOG00015016567	rnf113a	56	62.903	Scleropages_formosus
ENSVVUG00000004522	-	77	55.022	ENSSMAG00000009235	rnf113a	57	64.171	Scophthalmus_maximus
ENSVVUG00000004522	-	82	55.556	ENSSDUG00000022244	rnf113a	57	64.021	Seriola_dumerili
ENSVVUG00000004522	-	82	55.556	ENSSLDG00000018582	rnf113a	57	64.021	Seriola_lalandi_dorsalis
ENSVVUG00000004522	-	82	73.361	ENSSARG00000010436	-	71	69.758	Sorex_araneus
ENSVVUG00000004522	-	79	64.135	ENSSPUG00000018786	-	53	68.063	Sphenodon_punctatus
ENSVVUG00000004522	-	77	58.079	ENSSPAG00000013187	rnf113a	57	65.241	Stegastes_partitus
ENSVVUG00000004522	-	83	71.486	ENSSSCG00000032973	-	70	69.076	Sus_scrofa
ENSVVUG00000004522	-	79	64.681	ENSTGUG00000001947	-	58	69.634	Taeniopygia_guttata
ENSVVUG00000004522	-	80	54.167	ENSTRUG00000011142	rnf113a	57	63.636	Takifugu_rubripes
ENSVVUG00000004522	-	79	54.894	ENSTNIG00000014938	rnf113a	57	63.298	Tetraodon_nigroviridis
ENSVVUG00000004522	-	83	72.691	ENSTBEG00000012687	-	71	69.478	Tupaia_belangeri
ENSVVUG00000004522	-	82	73.663	ENSUAMG00000024564	-	71	73.279	Ursus_americanus
ENSVVUG00000004522	-	77	73.043	ENSUMAG00000002167	-	69	72.222	Ursus_maritimus
ENSVVUG00000004522	-	70	67.925	ENSVPAG00000004521	-	62	68.557	Vicugna_pacos
ENSVVUG00000004522	-	82	57.317	ENSXETG00000002042	rnf113a	58	65.608	Xenopus_tropicalis
ENSVVUG00000004522	-	78	58.190	ENSXCOG00000017542	rnf113a	59	64.550	Xiphophorus_couchianus
ENSVVUG00000004522	-	78	58.190	ENSXMAG00000008169	rnf113a	57	64.550	Xiphophorus_maculatus