EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000004598 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA2
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 138407 bases
Position: chrNBDQ01000038.1:12197475-12335881
Accession: 11098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000006096	ResIII	PF04851.15	2e-08	1	1
ENSVVUP00000006096	BRK	PF07533.16	6.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000008262	SMARCA2-203	783	-	ENSVVUP00000006179	260 (aa)	-	UPI0005BAB69F
ENSVVUT00000008293	SMARCA2-205	765	-	ENSVVUP00000006204	254 (aa)	-	UPI000059FD00
ENSVVUT00000008256	SMARCA2-202	831	-	ENSVVUP00000006174	276 (aa)	-	UPI000059FD02
ENSVVUT00000008154	SMARCA2-201	3534	-	ENSVVUP00000006096	1177 (aa)	-	-
ENSVVUT00000008284	SMARCA2-204	747	-	ENSVVUP00000006197	248 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000004598's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000004598's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000004598	SMARCA2	97	82.170	ENSVVUG00000017820	SMARCA4	71	82.598

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000004598	SMARCA2	99	95.913	ENSG00000080503	SMARCA2	100	100.000	Homo_sapiens
ENSVVUG00000004598	SMARCA2	96	86.021	ENSAPOG00000002641	SMARCA2	77	86.497	Acanthochromis_polyacanthus
ENSVVUG00000004598	SMARCA2	99	94.253	ENSAMEG00000012325	SMARCA2	95	94.253	Ailuropoda_melanoleuca
ENSVVUG00000004598	SMARCA2	96	85.277	ENSACIG00000015607	SMARCA2	75	85.702	Amphilophus_citrinellus
ENSVVUG00000004598	SMARCA2	96	86.106	ENSAOCG00000009647	-	75	85.518	Amphiprion_ocellaris
ENSVVUG00000004598	SMARCA2	96	86.106	ENSAPEG00000007646	SMARCA2	77	85.768	Amphiprion_percula
ENSVVUG00000004598	SMARCA2	96	86.878	ENSATEG00000006916	SMARCA2	73	87.050	Anabas_testudineus
ENSVVUG00000004598	SMARCA2	89	93.142	ENSAPLG00000013873	SMARCA2	72	93.142	Anas_platyrhynchos
ENSVVUG00000004598	SMARCA2	96	93.053	ENSACAG00000002423	SMARCA2	75	93.568	Anolis_carolinensis
ENSVVUG00000004598	SMARCA2	99	95.913	ENSANAG00000026498	SMARCA2	76	95.913	Aotus_nancymaae
ENSVVUG00000004598	SMARCA2	96	86.609	ENSACLG00000004248	SMARCA2	75	86.867	Astatotilapia_calliptera
ENSVVUG00000004598	SMARCA2	96	87.675	ENSAMXG00000012404	smarca2	75	87.587	Astyanax_mexicanus
ENSVVUG00000004598	SMARCA2	99	95.830	ENSBTAG00000007494	SMARCA2	77	95.830	Bos_taurus
ENSVVUG00000004598	SMARCA2	99	95.913	ENSCJAG00000010710	SMARCA2	76	96.093	Callithrix_jacchus
ENSVVUG00000004598	SMARCA2	99	96.080	ENSCAFG00000002013	SMARCA2	77	96.080	Canis_familiaris
ENSVVUG00000004598	SMARCA2	98	97.344	ENSCAFG00020026802	SMARCA2	96	97.344	Canis_lupus_dingo
ENSVVUG00000004598	SMARCA2	99	95.746	ENSCHIG00000025863	SMARCA2	77	95.746	Capra_hircus
ENSVVUG00000004598	SMARCA2	99	95.913	ENSTSYG00000003858	SMARCA2	76	95.913	Carlito_syrichta
ENSVVUG00000004598	SMARCA2	99	93.491	ENSCAPG00000002890	SMARCA2	76	93.491	Cavia_aperea
ENSVVUG00000004598	SMARCA2	99	95.746	ENSCPOG00000005475	SMARCA2	76	95.746	Cavia_porcellus
ENSVVUG00000004598	SMARCA2	99	95.913	ENSCCAG00000030636	SMARCA2	76	95.913	Cebus_capucinus
ENSVVUG00000004598	SMARCA2	99	95.830	ENSCATG00000031470	SMARCA2	76	95.830	Cercocebus_atys
ENSVVUG00000004598	SMARCA2	99	95.580	ENSCLAG00000014484	SMARCA2	76	95.580	Chinchilla_lanigera
ENSVVUG00000004598	SMARCA2	95	96.070	ENSCSAG00000008650	SMARCA2	78	96.070	Chlorocebus_sabaeus
ENSVVUG00000004598	SMARCA2	86	92.607	ENSCHOG00000004316	SMARCA2	65	92.607	Choloepus_hoffmanni
ENSVVUG00000004598	SMARCA2	96	94.511	ENSCPBG00000025463	SMARCA2	80	94.940	Chrysemys_picta_bellii
ENSVVUG00000004598	SMARCA2	99	95.913	ENSCANG00000039597	SMARCA2	77	95.913	Colobus_angolensis_palliatus
ENSVVUG00000004598	SMARCA2	95	92.287	ENSCGRG00001002323	Smarca2	74	92.726	Cricetulus_griseus_chok1gshd
ENSVVUG00000004598	SMARCA2	96	82.597	ENSCSEG00000019311	SMARCA2	73	82.759	Cynoglossus_semilaevis
ENSVVUG00000004598	SMARCA2	83	86.276	ENSCVAG00000016571	SMARCA2	73	86.364	Cyprinodon_variegatus
ENSVVUG00000004598	SMARCA2	96	87.210	ENSDARG00000008904	smarca2	74	87.039	Danio_rerio
ENSVVUG00000004598	SMARCA2	99	95.496	ENSDNOG00000006402	SMARCA2	76	95.496	Dasypus_novemcinctus
ENSVVUG00000004598	SMARCA2	99	95.580	ENSDORG00000014832	Smarca2	76	95.580	Dipodomys_ordii
ENSVVUG00000004598	SMARCA2	96	61.702	FBgn0000212	brm	69	63.636	Drosophila_melanogaster
ENSVVUG00000004598	SMARCA2	97	66.892	ENSEBUG00000002449	-	81	68.793	Eptatretus_burgeri
ENSVVUG00000004598	SMARCA2	97	77.082	ENSEBUG00000011442	-	76	76.877	Eptatretus_burgeri
ENSVVUG00000004598	SMARCA2	99	95.913	ENSEASG00005010312	SMARCA2	77	95.913	Equus_asinus_asinus
ENSVVUG00000004598	SMARCA2	72	100.000	ENSEEUG00000015540	-	58	100.000	Erinaceus_europaeus
ENSVVUG00000004598	SMARCA2	96	85.714	ENSELUG00000010318	smarca2	78	85.495	Esox_lucius
ENSVVUG00000004598	SMARCA2	99	95.746	ENSFCAG00000001568	SMARCA2	77	95.746	Felis_catus
ENSVVUG00000004598	SMARCA2	96	94.768	ENSFALG00000010416	SMARCA2	80	95.026	Ficedula_albicollis
ENSVVUG00000004598	SMARCA2	99	95.663	ENSFDAG00000010502	SMARCA2	76	95.663	Fukomys_damarensis
ENSVVUG00000004598	SMARCA2	99	86.441	ENSFHEG00000021250	SMARCA2	75	85.508	Fundulus_heteroclitus
ENSVVUG00000004598	SMARCA2	96	83.319	ENSGMOG00000014229	SMARCA2	75	83.362	Gadus_morhua
ENSVVUG00000004598	SMARCA2	99	94.583	ENSGALG00000010164	SMARCA2	77	94.583	Gallus_gallus
ENSVVUG00000004598	SMARCA2	96	81.890	ENSGAFG00000001164	SMARCA2	73	81.627	Gambusia_affinis
ENSVVUG00000004598	SMARCA2	96	84.247	ENSGACG00000014488	SMARCA2	74	84.075	Gasterosteus_aculeatus
ENSVVUG00000004598	SMARCA2	96	94.511	ENSGAGG00000024412	SMARCA2	74	95.026	Gopherus_agassizii
ENSVVUG00000004598	SMARCA2	98	97.116	ENSGGOG00000000513	SMARCA2	79	97.116	Gorilla_gorilla
ENSVVUG00000004598	SMARCA2	96	86.609	ENSHBUG00000006691	SMARCA2	74	86.781	Haplochromis_burtoni
ENSVVUG00000004598	SMARCA2	99	95.830	ENSHGLG00000005215	SMARCA2	75	95.830	Heterocephalus_glaber_female
ENSVVUG00000004598	SMARCA2	99	95.830	ENSHGLG00100010496	SMARCA2	78	95.830	Heterocephalus_glaber_male
ENSVVUG00000004598	SMARCA2	84	87.298	ENSHCOG00000015348	-	74	87.399	Hippocampus_comes
ENSVVUG00000004598	SMARCA2	96	86.867	ENSIPUG00000011060	smarca2	76	87.274	Ictalurus_punctatus
ENSVVUG00000004598	SMARCA2	99	95.580	ENSSTOG00000006812	SMARCA2	77	95.580	Ictidomys_tridecemlineatus
ENSVVUG00000004598	SMARCA2	99	95.663	ENSJJAG00000010867	Smarca2	76	95.663	Jaculus_jaculus
ENSVVUG00000004598	SMARCA2	96	86.713	ENSKMAG00000015844	-	72	86.885	Kryptolebias_marmoratus
ENSVVUG00000004598	SMARCA2	96	88.176	ENSLOCG00000011499	smarca2	74	88.176	Lepisosteus_oculatus
ENSVVUG00000004598	SMARCA2	99	95.329	ENSLAFG00000014061	SMARCA2	76	95.329	Loxodonta_africana
ENSVVUG00000004598	SMARCA2	99	95.830	ENSMFAG00000003814	SMARCA2	78	95.830	Macaca_fascicularis
ENSVVUG00000004598	SMARCA2	99	95.830	ENSMMUG00000015279	SMARCA2	77	95.830	Macaca_mulatta
ENSVVUG00000004598	SMARCA2	99	95.830	ENSMNEG00000041069	SMARCA2	77	95.830	Macaca_nemestrina
ENSVVUG00000004598	SMARCA2	99	95.830	ENSMLEG00000027418	SMARCA2	79	95.830	Mandrillus_leucophaeus
ENSVVUG00000004598	SMARCA2	96	87.221	ENSMAMG00000003056	SMARCA2	76	87.311	Mastacembelus_armatus
ENSVVUG00000004598	SMARCA2	96	86.609	ENSMZEG00005020709	SMARCA2	74	86.781	Maylandia_zebra
ENSVVUG00000004598	SMARCA2	68	75.199	ENSMGAG00000005160	-	71	75.199	Meleagris_gallopavo
ENSVVUG00000004598	SMARCA2	99	95.663	ENSMICG00000005162	SMARCA2	77	95.663	Microcebus_murinus
ENSVVUG00000004598	SMARCA2	99	95.496	ENSMOCG00000001611	Smarca2	76	95.496	Microtus_ochrogaster
ENSVVUG00000004598	SMARCA2	97	85.517	ENSMMOG00000014196	SMARCA2	74	86.937	Mola_mola
ENSVVUG00000004598	SMARCA2	99	94.996	ENSMODG00000003578	SMARCA2	76	94.996	Monodelphis_domestica
ENSVVUG00000004598	SMARCA2	96	87.446	ENSMALG00000009611	SMARCA2	74	87.533	Monopterus_albus
ENSVVUG00000004598	SMARCA2	99	95.496	MGP_CAROLIEiJ_G0022841	Smarca2	75	95.496	Mus_caroli
ENSVVUG00000004598	SMARCA2	99	95.413	ENSMUSG00000024921	Smarca2	99	99.441	Mus_musculus
ENSVVUG00000004598	SMARCA2	99	95.413	MGP_PahariEiJ_G0014334	Smarca2	76	95.413	Mus_pahari
ENSVVUG00000004598	SMARCA2	99	95.329	MGP_SPRETEiJ_G0023759	Smarca2	84	100.000	Mus_spretus
ENSVVUG00000004598	SMARCA2	99	94.412	ENSMPUG00000005171	SMARCA2	89	94.412	Mustela_putorius_furo
ENSVVUG00000004598	SMARCA2	99	90.721	ENSMLUG00000002342	SMARCA2	75	90.721	Myotis_lucifugus
ENSVVUG00000004598	SMARCA2	99	93.673	ENSNGAG00000000108	Smarca2	77	93.673	Nannospalax_galili
ENSVVUG00000004598	SMARCA2	92	76.944	ENSNBRG00000017998	SMARCA2	94	83.085	Neolamprologus_brichardi
ENSVVUG00000004598	SMARCA2	99	95.329	ENSNLEG00000008575	SMARCA2	78	95.329	Nomascus_leucogenys
ENSVVUG00000004598	SMARCA2	95	87.522	ENSMEUG00000009812	SMARCA2	75	87.522	Notamacropus_eugenii
ENSVVUG00000004598	SMARCA2	99	90.242	ENSOPRG00000013474	SMARCA2	76	90.242	Ochotona_princeps
ENSVVUG00000004598	SMARCA2	99	95.250	ENSODEG00000005452	SMARCA2	75	95.250	Octodon_degus
ENSVVUG00000004598	SMARCA2	96	87.158	ENSONIG00000014163	SMARCA2	73	87.243	Oreochromis_niloticus
ENSVVUG00000004598	SMARCA2	64	91.528	ENSOANG00000008299	-	95	95.418	Ornithorhynchus_anatinus
ENSVVUG00000004598	SMARCA2	99	95.830	ENSOCUG00000006320	SMARCA2	76	95.830	Oryctolagus_cuniculus
ENSVVUG00000004598	SMARCA2	96	86.364	ENSORLG00000020820	SMARCA2	77	85.161	Oryzias_latipes
ENSVVUG00000004598	SMARCA2	96	86.535	ENSORLG00015006289	SMARCA2	76	85.133	Oryzias_latipes_hsok
ENSVVUG00000004598	SMARCA2	96	86.524	ENSOMEG00000009736	-	77	85.963	Oryzias_melastigma
ENSVVUG00000004598	SMARCA2	99	95.830	ENSOGAG00000017053	SMARCA2	75	95.830	Otolemur_garnettii
ENSVVUG00000004598	SMARCA2	99	95.333	ENSOARG00000013265	SMARCA2	77	95.333	Ovis_aries
ENSVVUG00000004598	SMARCA2	99	95.913	ENSPPAG00000038717	SMARCA2	80	95.913	Pan_paniscus
ENSVVUG00000004598	SMARCA2	99	95.913	ENSPPRG00000001879	SMARCA2	77	95.913	Panthera_pardus
ENSVVUG00000004598	SMARCA2	99	95.913	ENSPTRG00000051168	SMARCA2	76	96.089	Pan_troglodytes
ENSVVUG00000004598	SMARCA2	96	93.182	ENSPANG00000025121	SMARCA2	74	93.636	Papio_anubis
ENSVVUG00000004598	SMARCA2	97	87.853	ENSPKIG00000018469	-	76	87.983	Paramormyrops_kingsleyae
ENSVVUG00000004598	SMARCA2	96	94.430	ENSPSIG00000006284	SMARCA2	74	94.944	Pelodiscus_sinensis
ENSVVUG00000004598	SMARCA2	94	82.177	ENSPMGG00000013696	-	75	82.090	Periophthalmus_magnuspinnatus
ENSVVUG00000004598	SMARCA2	99	94.829	ENSPEMG00000019821	Smarca2	76	94.829	Peromyscus_maniculatus_bairdii
ENSVVUG00000004598	SMARCA2	58	78.601	ENSPMAG00000001030	-	100	79.272	Petromyzon_marinus
ENSVVUG00000004598	SMARCA2	95	78.073	ENSPMAG00000005337	-	76	77.934	Petromyzon_marinus
ENSVVUG00000004598	SMARCA2	99	94.746	ENSPCIG00000015658	SMARCA2	78	94.746	Phascolarctos_cinereus
ENSVVUG00000004598	SMARCA2	99	84.679	ENSPFOG00000001856	SMARCA2	73	86.364	Poecilia_formosa
ENSVVUG00000004598	SMARCA2	99	84.679	ENSPLAG00000017829	SMARCA2	73	84.549	Poecilia_latipinna
ENSVVUG00000004598	SMARCA2	99	84.596	ENSPMEG00000001815	-	72	86.278	Poecilia_mexicana
ENSVVUG00000004598	SMARCA2	99	84.846	ENSPREG00000013800	SMARCA2	72	86.535	Poecilia_reticulata
ENSVVUG00000004598	SMARCA2	99	95.413	ENSPPYG00000019258	SMARCA2	76	95.413	Pongo_abelii
ENSVVUG00000004598	SMARCA2	96	92.967	ENSPCOG00000025709	SMARCA2	76	92.697	Propithecus_coquereli
ENSVVUG00000004598	SMARCA2	93	95.709	ENSPVAG00000000901	SMARCA2	75	95.709	Pteropus_vampyrus
ENSVVUG00000004598	SMARCA2	96	82.904	ENSPNYG00000004533	SMARCA2	73	82.990	Pundamilia_nyererei
ENSVVUG00000004598	SMARCA2	96	88.498	ENSPNAG00000014635	smarca2	73	88.412	Pygocentrus_nattereri
ENSVVUG00000004598	SMARCA2	99	94.002	ENSRNOG00000011931	Smarca2	76	94.002	Rattus_norvegicus
ENSVVUG00000004598	SMARCA2	99	95.913	ENSRBIG00000038618	SMARCA2	89	95.833	Rhinopithecus_bieti
ENSVVUG00000004598	SMARCA2	99	96.390	ENSRROG00000019271	SMARCA2	78	96.390	Rhinopithecus_roxellana
ENSVVUG00000004598	SMARCA2	99	95.913	ENSSBOG00000034827	SMARCA2	77	95.913	Saimiri_boliviensis_boliviensis
ENSVVUG00000004598	SMARCA2	96	95.107	ENSSHAG00000007884	SMARCA2	74	95.193	Sarcophilus_harrisii
ENSVVUG00000004598	SMARCA2	89	88.290	ENSSFOG00015014870	SMARCA2	76	88.383	Scleropages_formosus
ENSVVUG00000004598	SMARCA2	96	85.491	ENSSMAG00000013707	SMARCA2	74	86.111	Scophthalmus_maximus
ENSVVUG00000004598	SMARCA2	96	87.249	ENSSDUG00000008852	-	73	87.958	Seriola_dumerili
ENSVVUG00000004598	SMARCA2	96	86.900	ENSSLDG00000025449	SMARCA2	72	86.998	Seriola_lalandi_dorsalis
ENSVVUG00000004598	SMARCA2	93	92.857	ENSSARG00000007888	SMARCA2	73	92.857	Sorex_araneus
ENSVVUG00000004598	SMARCA2	96	90.746	ENSSPUG00000001629	SMARCA2	76	91.174	Sphenodon_punctatus
ENSVVUG00000004598	SMARCA2	96	87.511	ENSSPAG00000020091	-	76	87.511	Stegastes_partitus
ENSVVUG00000004598	SMARCA2	99	95.913	ENSSSCG00000005232	SMARCA2	77	95.913	Sus_scrofa
ENSVVUG00000004598	SMARCA2	99	94.417	ENSTGUG00000005460	SMARCA2	76	94.417	Taeniopygia_guttata
ENSVVUG00000004598	SMARCA2	96	86.840	ENSTRUG00000015619	SMARCA2	74	85.951	Takifugu_rubripes
ENSVVUG00000004598	SMARCA2	65	100.000	ENSTBEG00000008767	SMARCA2	54	100.000	Tupaia_belangeri
ENSVVUG00000004598	SMARCA2	98	94.362	ENSTTRG00000002033	SMARCA2	76	94.362	Tursiops_truncatus
ENSVVUG00000004598	SMARCA2	89	96.279	ENSUAMG00000024701	SMARCA2	79	96.276	Ursus_americanus
ENSVVUG00000004598	SMARCA2	96	86.137	ENSVPAG00000001204	SMARCA2	81	86.560	Vicugna_pacos
ENSVVUG00000004598	SMARCA2	96	87.564	ENSXETG00000015299	smarca2	73	87.734	Xenopus_tropicalis
ENSVVUG00000004598	SMARCA2	89	86.093	ENSXCOG00000011073	SMARCA2	76	86.093	Xiphophorus_couchianus
ENSVVUG00000004598	SMARCA2	99	84.763	ENSXMAG00000015611	SMARCA2	76	86.364	Xiphophorus_maculatus