EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000004644 (Gene tree)
Gene ID: -
Gene Symbol: LARP1
Alias: KIAA0731|LARP|MGC19556
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 51258 bases
Position: chrNBDQ01000003.1:36216619-36267876
Accession: 112926970
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000005943	La	PF05383.17	1.2e-20	1	1
ENSVVUP00000005949	La	PF05383.17	1.2e-20	1	1
ENSVVUP00000005959	La	PF05383.17	1.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000007990	LARP1-203	2867	-	ENSVVUP00000005959	895 (aa)	XP_025863904	UPI00005A082D
ENSVVUT00000007977	LARP1-202	3310	-	ENSVVUP00000005949	895 (aa)	XP_025863904	UPI00005A082D
ENSVVUT00000007969	LARP1-201	3242	-	ENSVVUP00000005943	895 (aa)	XP_025863904	UPI00005A082D

Gene Model

Click here to download ENSVVUG00000004644's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000004644's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000004644	LARP1	96	62.659	ENSVVUG00000011307	LARP1B	95	62.426

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000004644	LARP1	100	97.207	ENSG00000155506	LARP1	100	96.906	Homo_sapiens
ENSVVUG00000004644	LARP1	84	81.938	ENSAPOG00000020685	larp1	77	83.645	Acanthochromis_polyacanthus
ENSVVUG00000004644	LARP1	100	99.106	ENSAMEG00000016673	LARP1	94	99.106	Ailuropoda_melanoleuca
ENSVVUG00000004644	LARP1	89	74.633	ENSACIG00000012994	larp1	76	74.627	Amphilophus_citrinellus
ENSVVUG00000004644	LARP1	92	70.657	ENSAOCG00000007792	larp1	97	71.225	Amphiprion_ocellaris
ENSVVUG00000004644	LARP1	96	71.940	ENSAPEG00000022246	larp1	81	72.274	Amphiprion_percula
ENSVVUG00000004644	LARP1	96	70.336	ENSATEG00000013523	larp1	78	70.323	Anabas_testudineus
ENSVVUG00000004644	LARP1	92	84.736	ENSAPLG00000007559	LARP1	93	84.856	Anas_platyrhynchos
ENSVVUG00000004644	LARP1	100	80.371	ENSACAG00000004071	LARP1	100	79.913	Anolis_carolinensis
ENSVVUG00000004644	LARP1	100	97.654	ENSANAG00000029949	LARP1	94	94.444	Aotus_nancymaae
ENSVVUG00000004644	LARP1	99	69.836	ENSACLG00000015256	larp1	90	70.077	Astatotilapia_calliptera
ENSVVUG00000004644	LARP1	95	73.131	ENSAMXG00000000859	larp1	81	72.590	Astyanax_mexicanus
ENSVVUG00000004644	LARP1	100	97.654	ENSBTAG00000008443	LARP1	81	97.654	Bos_taurus
ENSVVUG00000004644	LARP1	100	97.654	ENSCJAG00000004454	LARP1	87	97.654	Callithrix_jacchus
ENSVVUG00000004644	LARP1	99	100.000	ENSCAFG00000017639	LARP1	94	100.000	Canis_familiaris
ENSVVUG00000004644	LARP1	100	100.000	ENSCAFG00020023860	LARP1	100	100.000	Canis_lupus_dingo
ENSVVUG00000004644	LARP1	100	97.095	ENSCHIG00000014414	LARP1	83	96.098	Capra_hircus
ENSVVUG00000004644	LARP1	100	96.425	ENSTSYG00000013732	LARP1	93	92.737	Carlito_syrichta
ENSVVUG00000004644	LARP1	92	94.794	ENSCAPG00000013865	LARP1	84	94.794	Cavia_aperea
ENSVVUG00000004644	LARP1	100	97.318	ENSCPOG00000003377	LARP1	94	97.318	Cavia_porcellus
ENSVVUG00000004644	LARP1	100	97.765	ENSCCAG00000025201	LARP1	87	97.765	Cebus_capucinus
ENSVVUG00000004644	LARP1	100	97.318	ENSCATG00000030675	LARP1	87	97.318	Cercocebus_atys
ENSVVUG00000004644	LARP1	100	97.318	ENSCLAG00000012755	LARP1	91	97.318	Chinchilla_lanigera
ENSVVUG00000004644	LARP1	100	93.631	ENSCSAG00000010800	LARP1	100	93.631	Chlorocebus_sabaeus
ENSVVUG00000004644	LARP1	91	93.284	ENSCHOG00000012716	LARP1	82	93.284	Choloepus_hoffmanni
ENSVVUG00000004644	LARP1	100	81.506	ENSCPBG00000002173	LARP1	88	81.506	Chrysemys_picta_bellii
ENSVVUG00000004644	LARP1	100	96.983	ENSCANG00000037418	LARP1	87	96.983	Colobus_angolensis_palliatus
ENSVVUG00000004644	LARP1	100	96.313	ENSCGRG00001016913	Larp1	84	96.313	Cricetulus_griseus_chok1gshd
ENSVVUG00000004644	LARP1	96	90.825	ENSCGRG00000009916	Larp1	93	91.173	Cricetulus_griseus_crigri
ENSVVUG00000004644	LARP1	97	70.134	ENSCSEG00000016431	larp1	81	70.078	Cynoglossus_semilaevis
ENSVVUG00000004644	LARP1	98	69.333	ENSCVAG00000022687	larp1	79	70.387	Cyprinodon_variegatus
ENSVVUG00000004644	LARP1	98	68.218	ENSDARG00000101722	larp1	87	67.986	Danio_rerio
ENSVVUG00000004644	LARP1	100	96.325	ENSDNOG00000012073	LARP1	81	96.325	Dasypus_novemcinctus
ENSVVUG00000004644	LARP1	100	93.743	ENSDORG00000002897	Larp1	92	93.743	Dipodomys_ordii
ENSVVUG00000004644	LARP1	92	97.094	ENSETEG00000020251	LARP1	94	97.094	Echinops_telfairi
ENSVVUG00000004644	LARP1	100	98.212	ENSEASG00005001070	LARP1	81	98.212	Equus_asinus_asinus
ENSVVUG00000004644	LARP1	100	98.212	ENSECAG00000017002	LARP1	66	98.212	Equus_caballus
ENSVVUG00000004644	LARP1	100	92.067	ENSEEUG00000001065	LARP1	96	92.067	Erinaceus_europaeus
ENSVVUG00000004644	LARP1	98	67.181	ENSELUG00000019403	larp1	81	69.855	Esox_lucius
ENSVVUG00000004644	LARP1	100	99.330	ENSFCAG00000000592	LARP1	89	97.765	Felis_catus
ENSVVUG00000004644	LARP1	93	80.851	ENSFALG00000008335	LARP1	99	81.257	Ficedula_albicollis
ENSVVUG00000004644	LARP1	100	97.318	ENSFDAG00000021125	LARP1	94	97.318	Fukomys_damarensis
ENSVVUG00000004644	LARP1	55	59.639	ENSFHEG00000020307	larp1	92	63.743	Fundulus_heteroclitus
ENSVVUG00000004644	LARP1	100	82.091	ENSGALG00000040109	LARP1	90	80.778	Gallus_gallus
ENSVVUG00000004644	LARP1	100	81.326	ENSGAGG00000025113	LARP1	97	80.952	Gopherus_agassizii
ENSVVUG00000004644	LARP1	100	97.207	ENSGGOG00000006048	LARP1	87	97.207	Gorilla_gorilla
ENSVVUG00000004644	LARP1	99	70.000	ENSHBUG00000020762	larp1	97	69.040	Haplochromis_burtoni
ENSVVUG00000004644	LARP1	100	96.425	ENSHGLG00000006267	LARP1	82	96.425	Heterocephalus_glaber_female
ENSVVUG00000004644	LARP1	98	79.455	ENSHGLG00100003395	-	81	79.796	Heterocephalus_glaber_male
ENSVVUG00000004644	LARP1	100	96.536	ENSHGLG00100014230	-	94	96.536	Heterocephalus_glaber_male
ENSVVUG00000004644	LARP1	90	79.108	ENSHCOG00000010786	larp1	80	78.873	Hippocampus_comes
ENSVVUG00000004644	LARP1	96	67.630	ENSIPUG00000019105	Larp1	85	67.627	Ictalurus_punctatus
ENSVVUG00000004644	LARP1	100	94.749	ENSSTOG00000005678	LARP1	93	94.749	Ictidomys_tridecemlineatus
ENSVVUG00000004644	LARP1	100	90.615	ENSJJAG00000016950	Larp1	84	90.615	Jaculus_jaculus
ENSVVUG00000004644	LARP1	95	71.379	ENSKMAG00000018468	larp1	87	71.543	Kryptolebias_marmoratus
ENSVVUG00000004644	LARP1	98	70.635	ENSLBEG00000027172	larp1	80	70.635	Labrus_bergylta
ENSVVUG00000004644	LARP1	92	76.179	ENSLOCG00000012457	larp1	85	77.146	Lepisosteus_oculatus
ENSVVUG00000004644	LARP1	100	95.866	ENSLAFG00000008991	LARP1	83	95.866	Loxodonta_africana
ENSVVUG00000004644	LARP1	100	96.872	ENSMFAG00000031651	LARP1	87	96.872	Macaca_fascicularis
ENSVVUG00000004644	LARP1	100	93.296	ENSMMUG00000009411	LARP1	93	93.296	Macaca_mulatta
ENSVVUG00000004644	LARP1	100	96.983	ENSMNEG00000039294	LARP1	100	96.983	Macaca_nemestrina
ENSVVUG00000004644	LARP1	100	97.207	ENSMLEG00000035142	LARP1	87	97.207	Mandrillus_leucophaeus
ENSVVUG00000004644	LARP1	99	71.685	ENSMAMG00000021788	larp1	82	71.685	Mastacembelus_armatus
ENSVVUG00000004644	LARP1	99	69.836	ENSMZEG00005009345	larp1	90	70.077	Maylandia_zebra
ENSVVUG00000004644	LARP1	100	80.989	ENSMGAG00000005696	LARP1	94	80.748	Meleagris_gallopavo
ENSVVUG00000004644	LARP1	100	96.313	ENSMAUG00000001385	Larp1	84	96.313	Mesocricetus_auratus
ENSVVUG00000004644	LARP1	99	97.427	ENSMICG00000000837	LARP1	99	97.427	Microcebus_murinus
ENSVVUG00000004644	LARP1	100	96.313	ENSMOCG00000008920	Larp1	84	96.313	Microtus_ochrogaster
ENSVVUG00000004644	LARP1	80	59.860	ENSMMOG00000013364	larp1	70	62.670	Mola_mola
ENSVVUG00000004644	LARP1	100	83.167	ENSMODG00000008663	LARP1	93	83.167	Monodelphis_domestica
ENSVVUG00000004644	LARP1	99	70.321	ENSMALG00000017180	larp1	93	68.013	Monopterus_albus
ENSVVUG00000004644	LARP1	100	95.978	MGP_CAROLIEiJ_G0016383	Larp1	83	95.978	Mus_caroli
ENSVVUG00000004644	LARP1	100	96.089	ENSMUSG00000037331	Larp1	83	96.089	Mus_musculus
ENSVVUG00000004644	LARP1	100	96.425	MGP_PahariEiJ_G0017518	Larp1	83	96.425	Mus_pahari
ENSVVUG00000004644	LARP1	100	96.089	MGP_SPRETEiJ_G0017225	Larp1	83	96.089	Mus_spretus
ENSVVUG00000004644	LARP1	78	99.284	ENSMPUG00000013564	LARP1	77	99.284	Mustela_putorius_furo
ENSVVUG00000004644	LARP1	99	93.946	ENSMLUG00000002608	LARP1	94	93.946	Myotis_lucifugus
ENSVVUG00000004644	LARP1	100	91.955	ENSNGAG00000001098	Larp1	92	91.844	Nannospalax_galili
ENSVVUG00000004644	LARP1	95	70.302	ENSNBRG00000008963	larp1	84	70.418	Neolamprologus_brichardi
ENSVVUG00000004644	LARP1	100	93.966	ENSNLEG00000016588	LARP1	93	90.615	Nomascus_leucogenys
ENSVVUG00000004644	LARP1	100	78.659	ENSMEUG00000002957	LARP1	93	78.883	Notamacropus_eugenii
ENSVVUG00000004644	LARP1	100	96.872	ENSOPRG00000013014	LARP1	94	96.872	Ochotona_princeps
ENSVVUG00000004644	LARP1	100	96.536	ENSODEG00000010824	LARP1	94	96.536	Octodon_degus
ENSVVUG00000004644	LARP1	98	71.348	ENSONIG00000017308	larp1	81	71.461	Oreochromis_niloticus
ENSVVUG00000004644	LARP1	100	82.838	ENSOANG00000005096	LARP1	92	83.516	Ornithorhynchus_anatinus
ENSVVUG00000004644	LARP1	100	98.212	ENSOCUG00000013066	LARP1	83	98.212	Oryctolagus_cuniculus
ENSVVUG00000004644	LARP1	95	70.046	ENSORLG00000000824	larp1	96	72.039	Oryzias_latipes
ENSVVUG00000004644	LARP1	95	70.046	ENSORLG00020022241	larp1	79	70.392	Oryzias_latipes_hni
ENSVVUG00000004644	LARP1	95	68.088	ENSORLG00015007538	larp1	79	68.312	Oryzias_latipes_hsok
ENSVVUG00000004644	LARP1	95	68.318	ENSOMEG00000003134	larp1	80	68.427	Oryzias_melastigma
ENSVVUG00000004644	LARP1	100	97.654	ENSOGAG00000016750	LARP1	94	97.654	Otolemur_garnettii
ENSVVUG00000004644	LARP1	100	95.196	ENSOARG00000009893	LARP1	93	95.196	Ovis_aries
ENSVVUG00000004644	LARP1	100	97.207	ENSPPAG00000042993	LARP1	87	97.207	Pan_paniscus
ENSVVUG00000004644	LARP1	100	97.765	ENSPPRG00000009780	LARP1	88	97.765	Panthera_pardus
ENSVVUG00000004644	LARP1	100	97.989	ENSPTIG00000007013	LARP1	88	97.989	Panthera_tigris_altaica
ENSVVUG00000004644	LARP1	100	96.983	ENSPTRG00000017447	LARP1	87	96.983	Pan_troglodytes
ENSVVUG00000004644	LARP1	100	97.318	ENSPANG00000008080	LARP1	87	97.318	Papio_anubis
ENSVVUG00000004644	LARP1	97	71.914	ENSPKIG00000010096	larp1	80	72.675	Paramormyrops_kingsleyae
ENSVVUG00000004644	LARP1	97	67.426	ENSPKIG00000017153	-	79	69.793	Paramormyrops_kingsleyae
ENSVVUG00000004644	LARP1	91	70.303	ENSPMGG00000011599	larp1	82	70.167	Periophthalmus_magnuspinnatus
ENSVVUG00000004644	LARP1	100	92.626	ENSPEMG00000022523	Larp1	93	92.514	Peromyscus_maniculatus_bairdii
ENSVVUG00000004644	LARP1	99	82.774	ENSPCIG00000019242	LARP1	69	90.936	Phascolarctos_cinereus
ENSVVUG00000004644	LARP1	95	70.771	ENSPFOG00000005836	larp1	77	70.938	Poecilia_formosa
ENSVVUG00000004644	LARP1	95	70.541	ENSPLAG00000008936	larp1	79	70.353	Poecilia_latipinna
ENSVVUG00000004644	LARP1	95	71.346	ENSPMEG00000013656	larp1	77	71.167	Poecilia_mexicana
ENSVVUG00000004644	LARP1	95	70.656	ENSPREG00000005726	larp1	86	70.595	Poecilia_reticulata
ENSVVUG00000004644	LARP1	100	92.514	ENSPCAG00000006407	LARP1	94	92.514	Procavia_capensis
ENSVVUG00000004644	LARP1	100	89.050	ENSPCOG00000016949	LARP1	93	92.849	Propithecus_coquereli
ENSVVUG00000004644	LARP1	100	97.656	ENSPVAG00000002262	LARP1	81	97.656	Pteropus_vampyrus
ENSVVUG00000004644	LARP1	99	69.836	ENSPNYG00000007938	larp1	90	70.077	Pundamilia_nyererei
ENSVVUG00000004644	LARP1	99	71.316	ENSPNAG00000021427	larp1	79	74.070	Pygocentrus_nattereri
ENSVVUG00000004644	LARP1	100	92.961	ENSRNOG00000031544	Larp1	92	92.961	Rattus_norvegicus
ENSVVUG00000004644	LARP1	100	96.983	ENSRBIG00000038005	LARP1	87	96.983	Rhinopithecus_bieti
ENSVVUG00000004644	LARP1	100	97.095	ENSRROG00000034073	LARP1	100	97.095	Rhinopithecus_roxellana
ENSVVUG00000004644	LARP1	100	97.654	ENSSBOG00000019816	LARP1	93	93.966	Saimiri_boliviensis_boliviensis
ENSVVUG00000004644	LARP1	100	84.615	ENSSHAG00000011115	LARP1	93	84.615	Sarcophilus_harrisii
ENSVVUG00000004644	LARP1	99	70.158	ENSSFOG00015018058	-	79	71.777	Scleropages_formosus
ENSVVUG00000004644	LARP1	95	70.169	ENSSFOG00015020304	larp1	85	69.710	Scleropages_formosus
ENSVVUG00000004644	LARP1	91	69.539	ENSSMAG00000007468	larp1	78	69.649	Scophthalmus_maximus
ENSVVUG00000004644	LARP1	98	70.419	ENSSDUG00000000268	larp1	95	70.383	Seriola_dumerili
ENSVVUG00000004644	LARP1	98	69.231	ENSSLDG00000016505	larp1	95	70.267	Seriola_lalandi_dorsalis
ENSVVUG00000004644	LARP1	68	93.640	ENSSARG00000013907	-	89	94.785	Sorex_araneus
ENSVVUG00000004644	LARP1	100	81.347	ENSSPUG00000012179	-	80	81.395	Sphenodon_punctatus
ENSVVUG00000004644	LARP1	99	69.880	ENSSPAG00000003910	larp1	81	69.880	Stegastes_partitus
ENSVVUG00000004644	LARP1	100	97.879	ENSSSCG00000017069	LARP1	100	97.879	Sus_scrofa
ENSVVUG00000004644	LARP1	96	83.527	ENSTGUG00000000704	LARP1	94	83.527	Taeniopygia_guttata
ENSVVUG00000004644	LARP1	99	68.147	ENSTRUG00000009470	larp1	82	67.763	Takifugu_rubripes
ENSVVUG00000004644	LARP1	92	94.673	ENSTBEG00000003381	LARP1	93	94.673	Tupaia_belangeri
ENSVVUG00000004644	LARP1	100	97.989	ENSTTRG00000015934	LARP1	94	97.989	Tursiops_truncatus
ENSVVUG00000004644	LARP1	100	99.218	ENSUAMG00000019334	LARP1	81	99.218	Ursus_americanus
ENSVVUG00000004644	LARP1	99	95.745	ENSUMAG00000002934	LARP1	93	95.745	Ursus_maritimus
ENSVVUG00000004644	LARP1	99	76.386	ENSXETG00000008413	larp1	86	76.386	Xenopus_tropicalis
ENSVVUG00000004644	LARP1	82	73.144	ENSXCOG00000004022	larp1	76	75.070	Xiphophorus_couchianus
ENSVVUG00000004644	LARP1	95	70.656	ENSXMAG00000018780	larp1	77	71.001	Xiphophorus_maculatus