EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000004956 (Gene tree)
Gene ID: -
Gene Symbol: YBX3
Alias: CSDA|CSDA1|ZONAB|dbpA
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 19145 bases
Position: chrNBDQ01000019.1:16666840-16685984
Accession: 2428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000006471	CSD	PF00313.22	1.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000008633	YBX3-201	807	-	ENSVVUP00000006471	268 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000004956's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000004956's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000004956	YBX3	100	40.351	ENSVVUG00000004434	-	80	42.491

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000004956	YBX3	100	89.209	ENSG00000060138	YBX3	79	97.260	Homo_sapiens
ENSVVUG00000004956	YBX3	100	93.841	ENSAMEG00000009393	YBX3	79	93.841	Ailuropoda_melanoleuca
ENSVVUG00000004956	YBX3	100	65.468	ENSAPLG00000003147	YBX3	98	65.468	Anas_platyrhynchos
ENSVVUG00000004956	YBX3	100	89.209	ENSANAG00000024492	-	88	89.209	Aotus_nancymaae
ENSVVUG00000004956	YBX3	100	92.279	ENSBTAG00000009663	YBX3	73	92.279	Bos_taurus
ENSVVUG00000004956	YBX3	100	89.209	ENSCJAG00000021660	-	75	88.489	Callithrix_jacchus
ENSVVUG00000004956	YBX3	69	89.873	ENSCJAG00000033824	-	71	89.041	Callithrix_jacchus
ENSVVUG00000004956	YBX3	100	95.652	ENSCAFG00000013401	YBX3	82	95.312	Canis_familiaris
ENSVVUG00000004956	YBX3	100	99.627	ENSCAFG00020006412	YBX3	74	99.627	Canis_lupus_dingo
ENSVVUG00000004956	YBX3	100	90.580	ENSCHIG00000010863	YBX3	78	90.217	Capra_hircus
ENSVVUG00000004956	YBX3	100	90.647	ENSTSYG00000004204	-	85	91.007	Carlito_syrichta
ENSVVUG00000004956	YBX3	100	54.348	ENSTSYG00000035821	-	70	48.084	Carlito_syrichta
ENSVVUG00000004956	YBX3	100	85.921	ENSCAPG00000015039	YBX3	90	85.921	Cavia_aperea
ENSVVUG00000004956	YBX3	100	85.921	ENSCPOG00000011329	YBX3	82	85.560	Cavia_porcellus
ENSVVUG00000004956	YBX3	100	88.489	ENSCCAG00000016469	YBX3	75	87.770	Cebus_capucinus
ENSVVUG00000004956	YBX3	100	89.209	ENSCATG00000034411	YBX3	75	88.489	Cercocebus_atys
ENSVVUG00000004956	YBX3	100	87.004	ENSCLAG00000016030	YBX3	91	87.004	Chinchilla_lanigera
ENSVVUG00000004956	YBX3	100	88.849	ENSCSAG00000008744	YBX3	75	88.129	Chlorocebus_sabaeus
ENSVVUG00000004956	YBX3	100	76.534	ENSCPBG00000014147	YBX3	77	76.173	Chrysemys_picta_bellii
ENSVVUG00000004956	YBX3	100	88.849	ENSCANG00000036801	YBX3	88	89.209	Colobus_angolensis_palliatus
ENSVVUG00000004956	YBX3	100	89.531	ENSCGRG00001016148	Ybx3	76	89.170	Cricetulus_griseus_chok1gshd
ENSVVUG00000004956	YBX3	100	88.652	ENSCGRG00000004563	Ybx3	95	88.652	Cricetulus_griseus_crigri
ENSVVUG00000004956	YBX3	100	90.975	ENSDORG00000009103	Ybx3	78	90.975	Dipodomys_ordii
ENSVVUG00000004956	YBX3	100	81.786	ENSETEG00000002557	YBX3	98	79.856	Echinops_telfairi
ENSVVUG00000004956	YBX3	100	93.657	ENSEASG00005014726	YBX3	74	93.657	Equus_asinus_asinus
ENSVVUG00000004956	YBX3	100	97.761	ENSECAG00000013777	YBX3	74	97.761	Equus_caballus
ENSVVUG00000004956	YBX3	100	88.489	ENSEEUG00000010415	YBX3	98	88.849	Erinaceus_europaeus
ENSVVUG00000004956	YBX3	100	94.224	ENSFCAG00000027748	YBX3	74	94.224	Felis_catus
ENSVVUG00000004956	YBX3	100	62.857	ENSFALG00000003661	YBX3	97	60.000	Ficedula_albicollis
ENSVVUG00000004956	YBX3	100	83.755	ENSFDAG00000021192	YBX3	89	83.755	Fukomys_damarensis
ENSVVUG00000004956	YBX3	100	57.246	ENSGALG00000031890	YBX3	71	54.317	Gallus_gallus
ENSVVUG00000004956	YBX3	100	75.451	ENSGAGG00000017780	YBX3	77	75.090	Gopherus_agassizii
ENSVVUG00000004956	YBX3	100	89.209	ENSGGOG00000001352	YBX3	75	88.489	Gorilla_gorilla
ENSVVUG00000004956	YBX3	92	75.875	ENSHGLG00000015495	-	75	73.438	Heterocephalus_glaber_female
ENSVVUG00000004956	YBX3	100	72.954	ENSHGLG00000014798	-	82	74.021	Heterocephalus_glaber_female
ENSVVUG00000004956	YBX3	80	89.286	ENSHGLG00100003589	YBX3	84	62.816	Heterocephalus_glaber_male
ENSVVUG00000004956	YBX3	100	85.560	ENSSTOG00000032577	-	78	85.560	Ictidomys_tridecemlineatus
ENSVVUG00000004956	YBX3	100	84.477	ENSSTOG00000002108	-	85	85.199	Ictidomys_tridecemlineatus
ENSVVUG00000004956	YBX3	100	65.591	ENSJJAG00000014239	Ybx3	87	67.606	Jaculus_jaculus
ENSVVUG00000004956	YBX3	100	92.780	ENSLAFG00000017247	YBX3	80	91.418	Loxodonta_africana
ENSVVUG00000004956	YBX3	100	90.876	ENSMFAG00000039369	YBX3	74	90.511	Macaca_fascicularis
ENSVVUG00000004956	YBX3	100	88.849	ENSMMUG00000022469	YBX3	86	88.849	Macaca_mulatta
ENSVVUG00000004956	YBX3	100	90.876	ENSMNEG00000045109	YBX3	74	90.511	Macaca_nemestrina
ENSVVUG00000004956	YBX3	100	91.336	ENSMLEG00000033618	YBX3	78	91.336	Mandrillus_leucophaeus
ENSVVUG00000004956	YBX3	100	63.309	ENSMGAG00000014224	YBX3	97	62.230	Meleagris_gallopavo
ENSVVUG00000004956	YBX3	100	89.170	ENSMAUG00000012185	Ybx3	86	89.170	Mesocricetus_auratus
ENSVVUG00000004956	YBX3	100	92.058	ENSMICG00000038002	-	75	91.697	Microcebus_murinus
ENSVVUG00000004956	YBX3	93	75.248	ENSMICG00000031459	-	72	80.000	Microcebus_murinus
ENSVVUG00000004956	YBX3	100	89.531	ENSMOCG00000016291	Ybx3	90	89.531	Microtus_ochrogaster
ENSVVUG00000004956	YBX3	100	82.014	ENSMODG00000018248	YBX3	88	82.014	Monodelphis_domestica
ENSVVUG00000004956	YBX3	100	89.531	MGP_CAROLIEiJ_G0028947	Ybx3	76	89.170	Mus_caroli
ENSVVUG00000004956	YBX3	100	89.531	ENSMUSG00000030189	Ybx3	76	89.170	Mus_musculus
ENSVVUG00000004956	YBX3	100	89.531	MGP_PahariEiJ_G0022709	Ybx3	76	89.531	Mus_pahari
ENSVVUG00000004956	YBX3	100	89.892	MGP_SPRETEiJ_G0029994	Ybx3	76	89.531	Mus_spretus
ENSVVUG00000004956	YBX3	93	81.467	ENSMPUG00000011810	YBX3	68	80.695	Mustela_putorius_furo
ENSVVUG00000004956	YBX3	93	95.294	ENSMLUG00000007476	YBX3	95	95.294	Myotis_lucifugus
ENSVVUG00000004956	YBX3	93	91.235	ENSNGAG00000000710	Ybx3	55	91.235	Nannospalax_galili
ENSVVUG00000004956	YBX3	100	86.691	ENSNLEG00000034844	YBX3	79	84.173	Nomascus_leucogenys
ENSVVUG00000004956	YBX3	59	78.788	ENSMEUG00000002507	-	77	78.788	Notamacropus_eugenii
ENSVVUG00000004956	YBX3	100	81.588	ENSODEG00000017957	YBX3	81	81.588	Octodon_degus
ENSVVUG00000004956	YBX3	93	95.219	ENSOCUG00000001889	YBX3	73	95.219	Oryctolagus_cuniculus
ENSVVUG00000004956	YBX3	100	90.493	ENSOGAG00000013245	YBX3	75	90.493	Otolemur_garnettii
ENSVVUG00000004956	YBX3	100	81.655	ENSOARG00000020919	YBX3	94	81.655	Ovis_aries
ENSVVUG00000004956	YBX3	100	89.209	ENSPPAG00000039068	YBX3	77	89.209	Pan_paniscus
ENSVVUG00000004956	YBX3	100	94.585	ENSPPRG00000005859	YBX3	74	94.585	Panthera_pardus
ENSVVUG00000004956	YBX3	100	95.290	ENSPTIG00000005322	YBX3	78	95.290	Panthera_tigris_altaica
ENSVVUG00000004956	YBX3	100	89.209	ENSPTRG00000004681	YBX3	74	88.489	Pan_troglodytes
ENSVVUG00000004956	YBX3	100	89.209	ENSPANG00000010280	YBX3	75	88.489	Papio_anubis
ENSVVUG00000004956	YBX3	73	88.660	ENSPSIG00000009247	YBX3	91	88.095	Pelodiscus_sinensis
ENSVVUG00000004956	YBX3	100	89.892	ENSPEMG00000012132	-	87	89.892	Peromyscus_maniculatus_bairdii
ENSVVUG00000004956	YBX3	80	87.387	ENSPEMG00000010391	-	78	61.957	Peromyscus_maniculatus_bairdii
ENSVVUG00000004956	YBX3	93	82.470	ENSPCIG00000029949	YBX3	97	82.470	Phascolarctos_cinereus
ENSVVUG00000004956	YBX3	100	88.849	ENSPPYG00000004279	YBX3	75	88.129	Pongo_abelii
ENSVVUG00000004956	YBX3	71	90.863	ENSPCAG00000001397	YBX3	67	90.576	Procavia_capensis
ENSVVUG00000004956	YBX3	59	94.937	ENSPCOG00000011663	YBX3	64	94.937	Propithecus_coquereli
ENSVVUG00000004956	YBX3	100	75.451	ENSPVAG00000006740	YBX3	51	92.147	Pteropus_vampyrus
ENSVVUG00000004956	YBX3	100	89.892	ENSRNOG00000005480	Ybx3	76	89.892	Rattus_norvegicus
ENSVVUG00000004956	YBX3	100	88.849	ENSRBIG00000039208	YBX3	75	88.489	Rhinopithecus_bieti
ENSVVUG00000004956	YBX3	100	88.849	ENSRROG00000029638	YBX3	75	88.489	Rhinopithecus_roxellana
ENSVVUG00000004956	YBX3	100	91.336	ENSSBOG00000030573	YBX3	80	91.336	Saimiri_boliviensis_boliviensis
ENSVVUG00000004956	YBX3	100	77.817	ENSSHAG00000003262	YBX3	95	78.873	Sarcophilus_harrisii
ENSVVUG00000004956	YBX3	100	93.502	ENSSSCG00000000633	YBX3	73	93.502	Sus_scrofa
ENSVVUG00000004956	YBX3	100	63.669	ENSTGUG00000012047	YBX3	98	62.950	Taeniopygia_guttata
ENSVVUG00000004956	YBX3	100	90.647	ENSTBEG00000012570	YBX3	77	91.007	Tupaia_belangeri
ENSVVUG00000004956	YBX3	93	84.706	ENSTTRG00000008045	YBX3	96	84.314	Tursiops_truncatus
ENSVVUG00000004956	YBX3	100	95.604	ENSUAMG00000016662	YBX3	100	95.604	Ursus_americanus
ENSVVUG00000004956	YBX3	100	94.565	ENSUMAG00000016118	YBX3	91	94.565	Ursus_maritimus
ENSVVUG00000004956	YBX3	100	65.704	ENSVPAG00000000876	YBX3	98	68.953	Vicugna_pacos
ENSVVUG00000004956	YBX3	90	63.889	ENSXETG00000016239	ybx3	87	51.712	Xenopus_tropicalis