EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000004987 (Gene tree)
Gene ID: -
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 33628 bases
Position: chrNBDQ01000250.1:776301-809928
Accession: 112911054
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000006439	CPSF_A	PF03178.15	6e-86	1	1
ENSVVUP00000006429	CPSF_A	PF03178.15	6.3e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000008592	DDB1-202	3925	-	ENSVVUP00000006439	1066 (aa)	-	-
ENSVVUT00000008581	DDB1-201	4663	XM_025987374	ENSVVUP00000006429	1140 (aa)	XP_025843159	UPI000DF6988D

Gene Model

Click here to download ENSVVUG00000004987's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000004987's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000004987	DDB1	100	99.825	ENSG00000167986	DDB1	100	100.000	Homo_sapiens
ENSVVUG00000004987	DDB1	98	91.465	ENSAPOG00000005036	ddb1	99	91.531	Acanthochromis_polyacanthus
ENSVVUG00000004987	DDB1	100	99.912	ENSAMEG00000016518	DDB1	100	99.912	Ailuropoda_melanoleuca
ENSVVUG00000004987	DDB1	86	91.837	ENSACIG00000020624	ddb1	99	91.837	Amphilophus_citrinellus
ENSVVUG00000004987	DDB1	100	91.140	ENSAOCG00000003066	ddb1	100	91.140	Amphiprion_ocellaris
ENSVVUG00000004987	DDB1	100	91.228	ENSAPEG00000000092	ddb1	100	91.228	Amphiprion_percula
ENSVVUG00000004987	DDB1	94	91.721	ENSATEG00000020571	ddb1	97	91.721	Anabas_testudineus
ENSVVUG00000004987	DDB1	98	96.533	ENSAPLG00000007174	DDB1	99	96.533	Anas_platyrhynchos
ENSVVUG00000004987	DDB1	100	96.930	ENSACAG00000017758	DDB1	100	96.930	Anolis_carolinensis
ENSVVUG00000004987	DDB1	100	99.825	ENSANAG00000021878	DDB1	100	99.825	Aotus_nancymaae
ENSVVUG00000004987	DDB1	100	91.491	ENSACLG00000012401	ddb1	100	91.491	Astatotilapia_calliptera
ENSVVUG00000004987	DDB1	100	99.737	ENSBTAG00000021569	DDB1	93	99.737	Bos_taurus
ENSVVUG00000004987	DDB1	100	37.211	WBGene00010890	ddb-1	100	37.126	Caenorhabditis_elegans
ENSVVUG00000004987	DDB1	100	99.825	ENSCJAG00000019319	DDB1	100	99.825	Callithrix_jacchus
ENSVVUG00000004987	DDB1	100	99.912	ENSCAFG00000016264	DDB1	100	99.912	Canis_familiaris
ENSVVUG00000004987	DDB1	94	99.628	ENSCAFG00020012722	DDB1	99	99.628	Canis_lupus_dingo
ENSVVUG00000004987	DDB1	100	99.737	ENSCHIG00000014969	DDB1	100	99.737	Capra_hircus
ENSVVUG00000004987	DDB1	100	99.123	ENSTSYG00000008027	DDB1	100	99.123	Carlito_syrichta
ENSVVUG00000004987	DDB1	98	99.106	ENSCAPG00000010786	DDB1	100	99.106	Cavia_aperea
ENSVVUG00000004987	DDB1	100	99.123	ENSCPOG00000009956	DDB1	100	99.123	Cavia_porcellus
ENSVVUG00000004987	DDB1	100	99.825	ENSCCAG00000035883	DDB1	100	99.825	Cebus_capucinus
ENSVVUG00000004987	DDB1	100	97.309	ENSCATG00000044495	DDB1	100	97.309	Cercocebus_atys
ENSVVUG00000004987	DDB1	100	99.211	ENSCLAG00000004126	DDB1	100	99.211	Chinchilla_lanigera
ENSVVUG00000004987	DDB1	100	99.825	ENSCSAG00000006392	DDB1	100	99.825	Chlorocebus_sabaeus
ENSVVUG00000004987	DDB1	88	92.614	ENSCHOG00000011377	DDB1	90	92.614	Choloepus_hoffmanni
ENSVVUG00000004987	DDB1	100	97.632	ENSCPBG00000017728	DDB1	100	97.632	Chrysemys_picta_bellii
ENSVVUG00000004987	DDB1	100	61.979	ENSCING00000007437	-	100	61.892	Ciona_intestinalis
ENSVVUG00000004987	DDB1	94	60.700	ENSCSAVG00000004783	-	100	60.276	Ciona_savignyi
ENSVVUG00000004987	DDB1	100	99.825	ENSCANG00000019948	DDB1	100	99.825	Colobus_angolensis_palliatus
ENSVVUG00000004987	DDB1	100	99.825	ENSCGRG00001016599	Ddb1	100	99.825	Cricetulus_griseus_chok1gshd
ENSVVUG00000004987	DDB1	100	99.825	ENSCGRG00000013427	Ddb1	100	99.825	Cricetulus_griseus_crigri
ENSVVUG00000004987	DDB1	93	91.235	ENSCSEG00000012499	ddb1	99	89.676	Cynoglossus_semilaevis
ENSVVUG00000004987	DDB1	94	91.426	ENSCVAG00000019531	ddb1	99	91.426	Cyprinodon_variegatus
ENSVVUG00000004987	DDB1	100	88.266	ENSDARG00000074431	ddb1	100	88.384	Danio_rerio
ENSVVUG00000004987	DDB1	94	99.442	ENSDNOG00000014884	DDB1	97	99.442	Dasypus_novemcinctus
ENSVVUG00000004987	DDB1	89	95.763	ENSDORG00000000127	Ddb1	100	100.000	Dipodomys_ordii
ENSVVUG00000004987	DDB1	100	61.890	FBgn0260962	pic	100	60.839	Drosophila_melanogaster
ENSVVUG00000004987	DDB1	71	100.000	ENSETEG00000001053	-	71	100.000	Echinops_telfairi
ENSVVUG00000004987	DDB1	78	85.152	ENSEBUG00000014593	ddb1	97	85.152	Eptatretus_burgeri
ENSVVUG00000004987	DDB1	100	99.737	ENSEASG00005008184	DDB1	100	99.737	Equus_asinus_asinus
ENSVVUG00000004987	DDB1	100	99.649	ENSECAG00000012136	DDB1	100	99.649	Equus_caballus
ENSVVUG00000004987	DDB1	85	97.475	ENSEEUG00000003194	DDB1	85	97.475	Erinaceus_europaeus
ENSVVUG00000004987	DDB1	100	91.228	ENSELUG00000023868	ddb1	100	91.228	Esox_lucius
ENSVVUG00000004987	DDB1	100	99.912	ENSFCAG00000029716	DDB1	100	99.912	Felis_catus
ENSVVUG00000004987	DDB1	100	96.938	ENSFALG00000011981	DDB1	100	96.938	Ficedula_albicollis
ENSVVUG00000004987	DDB1	100	99.123	ENSFDAG00000005128	DDB1	100	99.123	Fukomys_damarensis
ENSVVUG00000004987	DDB1	91	90.588	ENSFHEG00000022133	ddb1	98	90.670	Fundulus_heteroclitus
ENSVVUG00000004987	DDB1	79	94.649	ENSGMOG00000019386	ddb1	94	94.649	Gadus_morhua
ENSVVUG00000004987	DDB1	100	97.105	ENSGALG00000042333	DDB1	100	97.105	Gallus_gallus
ENSVVUG00000004987	DDB1	94	91.240	ENSGAFG00000013142	ddb1	99	91.240	Gambusia_affinis
ENSVVUG00000004987	DDB1	96	90.651	ENSGACG00000017182	ddb1	100	90.651	Gasterosteus_aculeatus
ENSVVUG00000004987	DDB1	95	97.694	ENSGAGG00000014124	DDB1	100	97.694	Gopherus_agassizii
ENSVVUG00000004987	DDB1	100	99.825	ENSGGOG00000004052	DDB1	100	99.825	Gorilla_gorilla
ENSVVUG00000004987	DDB1	100	91.491	ENSHBUG00000008873	ddb1	100	91.491	Haplochromis_burtoni
ENSVVUG00000004987	DDB1	100	99.035	ENSHGLG00000018430	DDB1	100	99.035	Heterocephalus_glaber_female
ENSVVUG00000004987	DDB1	100	97.982	ENSHGLG00100014475	DDB1	100	97.982	Heterocephalus_glaber_male
ENSVVUG00000004987	DDB1	94	90.985	ENSHCOG00000018670	ddb1	98	90.985	Hippocampus_comes
ENSVVUG00000004987	DDB1	100	90.526	ENSIPUG00000005612	DDB1	100	90.526	Ictalurus_punctatus
ENSVVUG00000004987	DDB1	100	99.825	ENSSTOG00000007552	DDB1	100	99.825	Ictidomys_tridecemlineatus
ENSVVUG00000004987	DDB1	100	99.649	ENSJJAG00000017769	Ddb1	100	99.649	Jaculus_jaculus
ENSVVUG00000004987	DDB1	94	91.333	ENSKMAG00000002315	ddb1	99	91.333	Kryptolebias_marmoratus
ENSVVUG00000004987	DDB1	85	91.503	ENSLBEG00000017065	ddb1	99	91.503	Labrus_bergylta
ENSVVUG00000004987	DDB1	100	93.520	ENSLACG00000017611	DDB1	100	93.520	Latimeria_chalumnae
ENSVVUG00000004987	DDB1	100	80.917	ENSLOCG00000000012	ddb1	100	83.333	Lepisosteus_oculatus
ENSVVUG00000004987	DDB1	100	99.649	ENSLAFG00000011513	DDB1	100	99.649	Loxodonta_africana
ENSVVUG00000004987	DDB1	100	99.825	ENSMFAG00000042035	DDB1	100	99.825	Macaca_fascicularis
ENSVVUG00000004987	DDB1	99	99.823	ENSMMUG00000002691	DDB1	99	99.823	Macaca_mulatta
ENSVVUG00000004987	DDB1	100	99.825	ENSMNEG00000031559	DDB1	100	99.825	Macaca_nemestrina
ENSVVUG00000004987	DDB1	100	99.825	ENSMLEG00000044136	DDB1	100	99.825	Mandrillus_leucophaeus
ENSVVUG00000004987	DDB1	100	91.491	ENSMAMG00000014372	ddb1	100	91.491	Mastacembelus_armatus
ENSVVUG00000004987	DDB1	100	91.404	ENSMZEG00005013835	ddb1	100	91.404	Maylandia_zebra
ENSVVUG00000004987	DDB1	94	96.462	ENSMGAG00000004990	DDB1	100	96.462	Meleagris_gallopavo
ENSVVUG00000004987	DDB1	100	99.825	ENSMAUG00000012926	Ddb1	100	99.825	Mesocricetus_auratus
ENSVVUG00000004987	DDB1	100	99.825	ENSMICG00000013703	DDB1	100	99.825	Microcebus_murinus
ENSVVUG00000004987	DDB1	100	99.561	ENSMOCG00000020499	Ddb1	100	99.561	Microtus_ochrogaster
ENSVVUG00000004987	DDB1	86	91.837	ENSMMOG00000001758	ddb1	99	91.837	Mola_mola
ENSVVUG00000004987	DDB1	100	89.187	ENSMODG00000020353	DDB1	100	89.187	Monodelphis_domestica
ENSVVUG00000004987	DDB1	100	91.491	ENSMALG00000014071	ddb1	100	91.491	Monopterus_albus
ENSVVUG00000004987	DDB1	100	99.737	MGP_CAROLIEiJ_G0022695	Ddb1	100	99.737	Mus_caroli
ENSVVUG00000004987	DDB1	100	99.649	ENSMUSG00000024740	Ddb1	100	99.649	Mus_musculus
ENSVVUG00000004987	DDB1	100	99.737	MGP_PahariEiJ_G0014189	Ddb1	100	99.737	Mus_pahari
ENSVVUG00000004987	DDB1	100	99.737	MGP_SPRETEiJ_G0023609	Ddb1	100	99.737	Mus_spretus
ENSVVUG00000004987	DDB1	100	96.579	ENSMPUG00000014200	DDB1	100	96.579	Mustela_putorius_furo
ENSVVUG00000004987	DDB1	100	99.298	ENSMLUG00000013232	DDB1	100	99.298	Myotis_lucifugus
ENSVVUG00000004987	DDB1	100	99.386	ENSNGAG00000009384	Ddb1	100	99.386	Nannospalax_galili
ENSVVUG00000004987	DDB1	100	91.579	ENSNBRG00000019581	ddb1	100	91.579	Neolamprologus_brichardi
ENSVVUG00000004987	DDB1	100	96.701	ENSNLEG00000002022	DDB1	100	96.701	Nomascus_leucogenys
ENSVVUG00000004987	DDB1	91	99.648	ENSMEUG00000001099	DDB1	93	99.648	Notamacropus_eugenii
ENSVVUG00000004987	DDB1	90	90.980	ENSOPRG00000008254	DDB1	90	90.980	Ochotona_princeps
ENSVVUG00000004987	DDB1	100	99.035	ENSODEG00000002419	DDB1	100	99.035	Octodon_degus
ENSVVUG00000004987	DDB1	100	91.491	ENSONIG00000005804	ddb1	100	91.491	Oreochromis_niloticus
ENSVVUG00000004987	DDB1	91	98.062	ENSOANG00000004897	DDB1	100	98.062	Ornithorhynchus_anatinus
ENSVVUG00000004987	DDB1	100	99.825	ENSOCUG00000001667	DDB1	100	99.825	Oryctolagus_cuniculus
ENSVVUG00000004987	DDB1	96	89.918	ENSORLG00000001399	ddb1	98	91.162	Oryzias_latipes
ENSVVUG00000004987	DDB1	96	89.826	ENSORLG00020001277	ddb1	97	89.826	Oryzias_latipes_hni
ENSVVUG00000004987	DDB1	94	90.977	ENSORLG00015002080	ddb1	99	90.977	Oryzias_latipes_hsok
ENSVVUG00000004987	DDB1	96	89.790	ENSOMEG00000006181	ddb1	99	89.790	Oryzias_melastigma
ENSVVUG00000004987	DDB1	100	99.649	ENSOGAG00000016103	DDB1	100	99.649	Otolemur_garnettii
ENSVVUG00000004987	DDB1	99	99.733	ENSOARG00000011716	DDB1	98	99.733	Ovis_aries
ENSVVUG00000004987	DDB1	100	99.825	ENSPPAG00000035343	DDB1	100	99.825	Pan_paniscus
ENSVVUG00000004987	DDB1	100	99.912	ENSPPRG00000013300	DDB1	100	99.912	Panthera_pardus
ENSVVUG00000004987	DDB1	98	99.911	ENSPTIG00000006909	DDB1	98	99.911	Panthera_tigris_altaica
ENSVVUG00000004987	DDB1	100	99.825	ENSPTRG00000003737	DDB1	100	99.825	Pan_troglodytes
ENSVVUG00000004987	DDB1	100	99.825	ENSPANG00000000242	DDB1	100	99.825	Papio_anubis
ENSVVUG00000004987	DDB1	94	91.333	ENSPKIG00000019213	ddb1	94	91.333	Paramormyrops_kingsleyae
ENSVVUG00000004987	DDB1	98	96.975	ENSPSIG00000013275	DDB1	100	96.975	Pelodiscus_sinensis
ENSVVUG00000004987	DDB1	86	91.531	ENSPMGG00000021179	ddb1	99	91.531	Periophthalmus_magnuspinnatus
ENSVVUG00000004987	DDB1	100	99.825	ENSPEMG00000012241	Ddb1	100	99.825	Peromyscus_maniculatus_bairdii
ENSVVUG00000004987	DDB1	89	86.935	ENSPMAG00000008479	ddb1	100	86.935	Petromyzon_marinus
ENSVVUG00000004987	DDB1	100	98.947	ENSPCIG00000002643	DDB1	100	98.947	Phascolarctos_cinereus
ENSVVUG00000004987	DDB1	100	90.885	ENSPFOG00000002768	ddb1	100	90.885	Poecilia_formosa
ENSVVUG00000004987	DDB1	100	90.702	ENSPLAG00000017227	ddb1	100	90.702	Poecilia_latipinna
ENSVVUG00000004987	DDB1	100	90.702	ENSPMEG00000011398	ddb1	100	90.702	Poecilia_mexicana
ENSVVUG00000004987	DDB1	94	91.349	ENSPREG00000004440	ddb1	98	91.349	Poecilia_reticulata
ENSVVUG00000004987	DDB1	100	94.852	ENSPPYG00000003193	DDB1	100	94.852	Pongo_abelii
ENSVVUG00000004987	DDB1	91	99.552	ENSPCAG00000011040	DDB1	85	99.552	Procavia_capensis
ENSVVUG00000004987	DDB1	100	98.336	ENSPCOG00000015176	DDB1	100	98.336	Propithecus_coquereli
ENSVVUG00000004987	DDB1	100	99.737	ENSPVAG00000003847	DDB1	100	99.737	Pteropus_vampyrus
ENSVVUG00000004987	DDB1	52	90.036	ENSPNYG00000010482	ddb1	100	90.036	Pundamilia_nyererei
ENSVVUG00000004987	DDB1	94	91.333	ENSPNAG00000006635	ddb1	97	91.333	Pygocentrus_nattereri
ENSVVUG00000004987	DDB1	100	99.737	ENSRNOG00000020715	Ddb1	100	99.737	Rattus_norvegicus
ENSVVUG00000004987	DDB1	100	99.825	ENSRBIG00000033611	DDB1	100	99.825	Rhinopithecus_bieti
ENSVVUG00000004987	DDB1	100	99.825	ENSRROG00000041407	DDB1	100	99.825	Rhinopithecus_roxellana
ENSVVUG00000004987	DDB1	100	99.737	ENSSBOG00000019775	DDB1	100	99.737	Saimiri_boliviensis_boliviensis
ENSVVUG00000004987	DDB1	94	96.916	ENSSHAG00000011600	DDB1	100	96.916	Sarcophilus_harrisii
ENSVVUG00000004987	DDB1	94	91.450	ENSSFOG00015011151	ddb1	97	91.450	Scleropages_formosus
ENSVVUG00000004987	DDB1	100	91.053	ENSSMAG00000009495	ddb1	100	91.053	Scophthalmus_maximus
ENSVVUG00000004987	DDB1	100	91.404	ENSSDUG00000004642	ddb1	100	91.404	Seriola_dumerili
ENSVVUG00000004987	DDB1	100	91.404	ENSSLDG00000015804	ddb1	100	91.404	Seriola_lalandi_dorsalis
ENSVVUG00000004987	DDB1	70	100.000	ENSSARG00000003290	-	72	100.000	Sorex_araneus
ENSVVUG00000004987	DDB1	100	97.807	ENSSPUG00000019338	DDB1	100	97.807	Sphenodon_punctatus
ENSVVUG00000004987	DDB1	94	91.628	ENSSPAG00000009888	ddb1	99	91.628	Stegastes_partitus
ENSVVUG00000004987	DDB1	100	98.860	ENSSSCG00000013094	DDB1	100	98.860	Sus_scrofa
ENSVVUG00000004987	DDB1	100	97.105	ENSTGUG00000006414	DDB1	100	97.105	Taeniopygia_guttata
ENSVVUG00000004987	DDB1	94	90.308	ENSTRUG00000016682	ddb1	98	90.308	Takifugu_rubripes
ENSVVUG00000004987	DDB1	90	85.312	ENSTNIG00000009565	ddb1	99	85.030	Tetraodon_nigroviridis
ENSVVUG00000004987	DDB1	89	100.000	ENSTTRG00000011055	DDB1	94	94.778	Tursiops_truncatus
ENSVVUG00000004987	DDB1	94	99.628	ENSUAMG00000017793	DDB1	93	99.628	Ursus_americanus
ENSVVUG00000004987	DDB1	94	99.628	ENSUMAG00000011788	DDB1	98	99.628	Ursus_maritimus
ENSVVUG00000004987	DDB1	90	100.000	ENSVPAG00000007963	DDB1	92	100.000	Vicugna_pacos
ENSVVUG00000004987	DDB1	100	93.269	ENSXETG00000008820	ddb1	100	93.269	Xenopus_tropicalis
ENSVVUG00000004987	DDB1	86	91.327	ENSXCOG00000013956	ddb1	99	91.327	Xiphophorus_couchianus
ENSVVUG00000004987	DDB1	94	91.240	ENSXMAG00000000022	ddb1	99	91.240	Xiphophorus_maculatus