EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000004996 (Gene tree)
Gene ID: -
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 18907 bases
Position: chrNBDQ01000031.1:16876156-16895062
Accession: 112920560
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000006445	zf-U11-48K	PF05253.12	3.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000008598	SNRNP48-201	2509	-	ENSVVUP00000006445	340 (aa)	XP_025855174	UPI000DF6F2B8

Gene Model

Click here to download ENSVVUG00000004996's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000004996's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000004996	SNRNP48	99	91.691	ENSG00000168566	SNRNP48	99	91.691	Homo_sapiens
ENSVVUG00000004996	SNRNP48	81	46.853	ENSAPOG00000021430	snrnp48	96	43.143	Acanthochromis_polyacanthus
ENSVVUG00000004996	SNRNP48	99	93.043	ENSAMEG00000017349	SNRNP48	99	93.043	Ailuropoda_melanoleuca
ENSVVUG00000004996	SNRNP48	82	46.127	ENSACIG00000002032	snrnp48	96	43.155	Amphilophus_citrinellus
ENSVVUG00000004996	SNRNP48	81	47.350	ENSAOCG00000010562	snrnp48	96	43.804	Amphiprion_ocellaris
ENSVVUG00000004996	SNRNP48	81	47.331	ENSAPEG00000003231	snrnp48	96	43.768	Amphiprion_percula
ENSVVUG00000004996	SNRNP48	77	49.265	ENSATEG00000020210	snrnp48	81	48.929	Anabas_testudineus
ENSVVUG00000004996	SNRNP48	83	64.726	ENSACAG00000002811	SNRNP48	90	64.726	Anolis_carolinensis
ENSVVUG00000004996	SNRNP48	99	91.098	ENSANAG00000033538	SNRNP48	99	91.098	Aotus_nancymaae
ENSVVUG00000004996	SNRNP48	92	45.794	ENSAMXG00000015309	snrnp48	99	44.160	Astyanax_mexicanus
ENSVVUG00000004996	SNRNP48	99	86.686	ENSBTAG00000001123	SNRNP48	99	87.574	Bos_taurus
ENSVVUG00000004996	SNRNP48	99	91.395	ENSCJAG00000021330	SNRNP48	99	91.395	Callithrix_jacchus
ENSVVUG00000004996	SNRNP48	100	98.824	ENSCAFG00000009574	SNRNP48	84	98.824	Canis_familiaris
ENSVVUG00000004996	SNRNP48	100	99.118	ENSCAFG00020013203	SNRNP48	100	99.118	Canis_lupus_dingo
ENSVVUG00000004996	SNRNP48	99	87.574	ENSCHIG00000015216	SNRNP48	99	88.462	Capra_hircus
ENSVVUG00000004996	SNRNP48	99	89.614	ENSTSYG00000000698	SNRNP48	99	89.614	Carlito_syrichta
ENSVVUG00000004996	SNRNP48	90	84.740	ENSCAPG00000006768	SNRNP48	100	84.740	Cavia_aperea
ENSVVUG00000004996	SNRNP48	99	87.500	ENSCPOG00000007910	SNRNP48	99	87.500	Cavia_porcellus
ENSVVUG00000004996	SNRNP48	99	89.911	ENSCCAG00000035652	SNRNP48	99	89.911	Cebus_capucinus
ENSVVUG00000004996	SNRNP48	99	91.098	ENSCATG00000033947	SNRNP48	99	91.098	Cercocebus_atys
ENSVVUG00000004996	SNRNP48	99	87.798	ENSCLAG00000003765	SNRNP48	99	87.798	Chinchilla_lanigera
ENSVVUG00000004996	SNRNP48	99	91.691	ENSCSAG00000007409	SNRNP48	99	91.691	Chlorocebus_sabaeus
ENSVVUG00000004996	SNRNP48	84	64.803	ENSCPBG00000019146	SNRNP48	92	64.803	Chrysemys_picta_bellii
ENSVVUG00000004996	SNRNP48	87	30.921	ENSCING00000004121	-	93	31.210	Ciona_intestinalis
ENSVVUG00000004996	SNRNP48	99	91.691	ENSCANG00000030017	SNRNP48	99	91.691	Colobus_angolensis_palliatus
ENSVVUG00000004996	SNRNP48	99	88.131	ENSCGRG00001001076	-	99	87.834	Cricetulus_griseus_chok1gshd
ENSVVUG00000004996	SNRNP48	98	69.880	ENSCGRG00001008805	-	94	69.277	Cricetulus_griseus_chok1gshd
ENSVVUG00000004996	SNRNP48	99	88.131	ENSCGRG00000007781	Snrnp48	99	87.834	Cricetulus_griseus_crigri
ENSVVUG00000004996	SNRNP48	77	46.792	ENSCSEG00000000722	snrnp48	86	43.871	Cynoglossus_semilaevis
ENSVVUG00000004996	SNRNP48	97	42.442	ENSCVAG00000019829	snrnp48	90	41.899	Cyprinodon_variegatus
ENSVVUG00000004996	SNRNP48	81	46.290	ENSDARG00000039989	snrnp48	87	46.865	Danio_rerio
ENSVVUG00000004996	SNRNP48	98	91.642	ENSDNOG00000014978	SNRNP48	99	90.855	Dasypus_novemcinctus
ENSVVUG00000004996	SNRNP48	99	87.202	ENSDORG00000015140	Snrnp48	99	86.944	Dipodomys_ordii
ENSVVUG00000004996	SNRNP48	99	93.433	ENSEASG00005012021	SNRNP48	99	93.155	Equus_asinus_asinus
ENSVVUG00000004996	SNRNP48	99	94.048	ENSECAG00000026937	SNRNP48	99	94.048	Equus_caballus
ENSVVUG00000004996	SNRNP48	99	68.437	ENSEEUG00000015437	SNRNP48	99	68.142	Erinaceus_europaeus
ENSVVUG00000004996	SNRNP48	87	46.205	ENSELUG00000009766	snrnp48	94	43.275	Esox_lucius
ENSVVUG00000004996	SNRNP48	99	95.252	ENSFCAG00000018853	SNRNP48	99	95.252	Felis_catus
ENSVVUG00000004996	SNRNP48	83	64.966	ENSFALG00000007797	SNRNP48	93	64.966	Ficedula_albicollis
ENSVVUG00000004996	SNRNP48	99	87.761	ENSFDAG00000009231	SNRNP48	99	87.500	Fukomys_damarensis
ENSVVUG00000004996	SNRNP48	59	54.455	ENSFHEG00000014647	snrnp48	97	48.421	Fundulus_heteroclitus
ENSVVUG00000004996	SNRNP48	72	47.773	ENSGMOG00000018599	-	93	43.750	Gadus_morhua
ENSVVUG00000004996	SNRNP48	82	63.322	ENSGALG00000013005	SNRNP48	89	66.792	Gallus_gallus
ENSVVUG00000004996	SNRNP48	72	48.617	ENSGAFG00000021639	snrnp48	92	43.413	Gambusia_affinis
ENSVVUG00000004996	SNRNP48	71	49.587	ENSGACG00000017756	-	96	44.023	Gasterosteus_aculeatus
ENSVVUG00000004996	SNRNP48	84	64.570	ENSGAGG00000000865	SNRNP48	97	64.570	Gopherus_agassizii
ENSVVUG00000004996	SNRNP48	99	91.691	ENSGGOG00000013220	SNRNP48	99	91.691	Gorilla_gorilla
ENSVVUG00000004996	SNRNP48	96	41.935	ENSHBUG00000017066	snrnp48	95	42.136	Haplochromis_burtoni
ENSVVUG00000004996	SNRNP48	99	88.657	ENSHGLG00000015241	SNRNP48	99	88.393	Heterocephalus_glaber_female
ENSVVUG00000004996	SNRNP48	99	88.657	ENSHGLG00100010027	SNRNP48	99	88.393	Heterocephalus_glaber_male
ENSVVUG00000004996	SNRNP48	71	45.679	ENSHCOG00000014066	snrnp48	92	40.909	Hippocampus_comes
ENSVVUG00000004996	SNRNP48	99	93.452	ENSSTOG00000014635	SNRNP48	99	93.452	Ictidomys_tridecemlineatus
ENSVVUG00000004996	SNRNP48	100	84.412	ENSJJAG00000011495	Snrnp48	100	84.412	Jaculus_jaculus
ENSVVUG00000004996	SNRNP48	89	43.464	ENSKMAG00000016514	snrnp48	83	44.828	Kryptolebias_marmoratus
ENSVVUG00000004996	SNRNP48	75	48.450	ENSLBEG00000026249	snrnp48	94	45.075	Labrus_bergylta
ENSVVUG00000004996	SNRNP48	96	53.293	ENSLACG00000003958	SNRNP48	98	52.187	Latimeria_chalumnae
ENSVVUG00000004996	SNRNP48	83	50.694	ENSLOCG00000004187	snrnp48	95	49.107	Lepisosteus_oculatus
ENSVVUG00000004996	SNRNP48	98	87.126	ENSLAFG00000011152	SNRNP48	99	87.126	Loxodonta_africana
ENSVVUG00000004996	SNRNP48	99	91.988	ENSMFAG00000045216	SNRNP48	99	91.988	Macaca_fascicularis
ENSVVUG00000004996	SNRNP48	99	91.988	ENSMMUG00000014785	SNRNP48	99	91.988	Macaca_mulatta
ENSVVUG00000004996	SNRNP48	99	91.691	ENSMNEG00000042269	SNRNP48	99	91.691	Macaca_nemestrina
ENSVVUG00000004996	SNRNP48	99	91.988	ENSMLEG00000034004	SNRNP48	99	91.988	Mandrillus_leucophaeus
ENSVVUG00000004996	SNRNP48	75	47.674	ENSMAMG00000018673	snrnp48	82	44.379	Mastacembelus_armatus
ENSVVUG00000004996	SNRNP48	82	65.306	ENSMGAG00000006037	SNRNP48	99	64.726	Meleagris_gallopavo
ENSVVUG00000004996	SNRNP48	99	88.988	ENSMAUG00000011944	Snrnp48	99	88.690	Mesocricetus_auratus
ENSVVUG00000004996	SNRNP48	99	89.614	ENSMICG00000012497	SNRNP48	99	89.614	Microcebus_murinus
ENSVVUG00000004996	SNRNP48	99	88.393	ENSMOCG00000015555	Snrnp48	99	88.095	Microtus_ochrogaster
ENSVVUG00000004996	SNRNP48	54	51.892	ENSMMOG00000003072	-	58	51.892	Mola_mola
ENSVVUG00000004996	SNRNP48	98	71.884	ENSMODG00000009996	SNRNP48	93	71.884	Monodelphis_domestica
ENSVVUG00000004996	SNRNP48	74	49.802	ENSMALG00000005725	snrnp48	94	45.482	Monopterus_albus
ENSVVUG00000004996	SNRNP48	99	86.944	MGP_CAROLIEiJ_G0018441	Snrnp48	99	86.944	Mus_caroli
ENSVVUG00000004996	SNRNP48	99	87.202	ENSMUSG00000021431	Snrnp48	99	87.202	Mus_musculus
ENSVVUG00000004996	SNRNP48	99	86.647	MGP_PahariEiJ_G0019509	Snrnp48	99	86.647	Mus_pahari
ENSVVUG00000004996	SNRNP48	99	86.350	MGP_SPRETEiJ_G0019321	Snrnp48	99	86.350	Mus_spretus
ENSVVUG00000004996	SNRNP48	99	86.607	ENSNGAG00000004849	Snrnp48	99	86.607	Nannospalax_galili
ENSVVUG00000004996	SNRNP48	74	46.484	ENSNBRG00000012127	snrnp48	95	41.349	Neolamprologus_brichardi
ENSVVUG00000004996	SNRNP48	99	91.988	ENSNLEG00000011667	SNRNP48	99	91.988	Nomascus_leucogenys
ENSVVUG00000004996	SNRNP48	95	77.329	ENSOPRG00000015471	SNRNP48	99	77.950	Ochotona_princeps
ENSVVUG00000004996	SNRNP48	76	46.360	ENSONIG00000001520	snrnp48	96	41.618	Oreochromis_niloticus
ENSVVUG00000004996	SNRNP48	57	64.904	ENSOANG00000019888	-	100	65.865	Ornithorhynchus_anatinus
ENSVVUG00000004996	SNRNP48	84	88.112	ENSOCUG00000005168	SNRNP48	99	87.789	Oryctolagus_cuniculus
ENSVVUG00000004996	SNRNP48	88	46.429	ENSORLG00000015654	snrnp48	93	44.868	Oryzias_latipes
ENSVVUG00000004996	SNRNP48	88	45.455	ENSORLG00020015976	snrnp48	79	44.282	Oryzias_latipes_hni
ENSVVUG00000004996	SNRNP48	88	46.104	ENSORLG00015022379	snrnp48	80	44.868	Oryzias_latipes_hsok
ENSVVUG00000004996	SNRNP48	83	47.222	ENSOMEG00000022007	snrnp48	95	43.478	Oryzias_melastigma
ENSVVUG00000004996	SNRNP48	91	89.677	ENSOGAG00000005275	SNRNP48	96	89.873	Otolemur_garnettii
ENSVVUG00000004996	SNRNP48	84	88.850	ENSOARG00000017319	SNRNP48	100	88.850	Ovis_aries
ENSVVUG00000004996	SNRNP48	99	91.988	ENSPPAG00000032873	SNRNP48	99	91.988	Pan_paniscus
ENSVVUG00000004996	SNRNP48	99	95.252	ENSPPRG00000004283	SNRNP48	99	95.252	Panthera_pardus
ENSVVUG00000004996	SNRNP48	84	96.167	ENSPTIG00000013502	SNRNP48	100	96.167	Panthera_tigris_altaica
ENSVVUG00000004996	SNRNP48	99	91.988	ENSPTRG00000017703	SNRNP48	99	91.988	Pan_troglodytes
ENSVVUG00000004996	SNRNP48	99	91.988	ENSPANG00000000771	SNRNP48	99	91.988	Papio_anubis
ENSVVUG00000004996	SNRNP48	94	45.994	ENSPKIG00000013703	snrnp48	61	49.153	Paramormyrops_kingsleyae
ENSVVUG00000004996	SNRNP48	88	61.392	ENSPSIG00000002213	SNRNP48	97	61.392	Pelodiscus_sinensis
ENSVVUG00000004996	SNRNP48	76	47.893	ENSPMGG00000008120	snrnp48	92	47.126	Periophthalmus_magnuspinnatus
ENSVVUG00000004996	SNRNP48	99	88.724	ENSPEMG00000008872	Snrnp48	99	88.427	Peromyscus_maniculatus_bairdii
ENSVVUG00000004996	SNRNP48	72	50.403	ENSPFOG00000003578	snrnp48	92	44.444	Poecilia_formosa
ENSVVUG00000004996	SNRNP48	66	49.558	ENSPLAG00000002290	snrnp48	76	49.558	Poecilia_latipinna
ENSVVUG00000004996	SNRNP48	72	49.597	ENSPMEG00000018033	snrnp48	92	43.844	Poecilia_mexicana
ENSVVUG00000004996	SNRNP48	71	49.794	ENSPREG00000018541	snrnp48	92	44.444	Poecilia_reticulata
ENSVVUG00000004996	SNRNP48	99	90.504	ENSPPYG00000016209	SNRNP48	99	90.504	Pongo_abelii
ENSVVUG00000004996	SNRNP48	79	67.164	ENSPCAG00000011991	SNRNP48	98	69.847	Procavia_capensis
ENSVVUG00000004996	SNRNP48	99	90.179	ENSPVAG00000002854	SNRNP48	99	90.179	Pteropus_vampyrus
ENSVVUG00000004996	SNRNP48	74	47.266	ENSPNYG00000015399	snrnp48	94	44.518	Pundamilia_nyererei
ENSVVUG00000004996	SNRNP48	99	88.131	ENSRNOG00000013756	Snrnp48	99	88.131	Rattus_norvegicus
ENSVVUG00000004996	SNRNP48	91	91.558	ENSRBIG00000043856	SNRNP48	96	92.053	Rhinopithecus_bieti
ENSVVUG00000004996	SNRNP48	99	91.691	ENSRROG00000043229	SNRNP48	99	91.691	Rhinopithecus_roxellana
ENSVVUG00000004996	SNRNP48	99	91.098	ENSSBOG00000019486	SNRNP48	99	91.098	Saimiri_boliviensis_boliviensis
ENSVVUG00000004996	SNRNP48	97	71.512	ENSSHAG00000014483	SNRNP48	99	71.512	Sarcophilus_harrisii
ENSVVUG00000004996	SNRNP48	75	49.434	ENSSFOG00015006610	snrnp48	74	47.368	Scleropages_formosus
ENSVVUG00000004996	SNRNP48	84	44.983	ENSSDUG00000014953	snrnp48	92	43.161	Seriola_dumerili
ENSVVUG00000004996	SNRNP48	79	47.810	ENSSLDG00000005989	snrnp48	92	42.988	Seriola_lalandi_dorsalis
ENSVVUG00000004996	SNRNP48	99	58.857	ENSSPUG00000006257	SNRNP48	85	64.765	Sphenodon_punctatus
ENSVVUG00000004996	SNRNP48	77	47.601	ENSSPAG00000006454	snrnp48	92	44.172	Stegastes_partitus
ENSVVUG00000004996	SNRNP48	85	62.838	ENSTGUG00000007575	SNRNP48	95	62.838	Taeniopygia_guttata
ENSVVUG00000004996	SNRNP48	71	50.617	ENSTRUG00000007031	snrnp48	82	48.084	Takifugu_rubripes
ENSVVUG00000004996	SNRNP48	71	46.914	ENSTNIG00000012977	-	72	46.914	Tetraodon_nigroviridis
ENSVVUG00000004996	SNRNP48	99	74.107	ENSTBEG00000015620	SNRNP48	99	74.107	Tupaia_belangeri
ENSVVUG00000004996	SNRNP48	99	90.208	ENSTTRG00000016715	SNRNP48	99	90.208	Tursiops_truncatus
ENSVVUG00000004996	SNRNP48	99	95.846	ENSUAMG00000003690	SNRNP48	99	95.846	Ursus_americanus
ENSVVUG00000004996	SNRNP48	84	88.502	ENSVPAG00000003557	SNRNP48	100	88.502	Vicugna_pacos
ENSVVUG00000004996	SNRNP48	85	53.488	ENSXETG00000020447	snrnp48	97	51.320	Xenopus_tropicalis
ENSVVUG00000004996	SNRNP48	66	49.339	ENSXCOG00000004478	snrnp48	68	49.339	Xiphophorus_couchianus
ENSVVUG00000004996	SNRNP48	81	48.188	ENSXMAG00000013595	snrnp48	92	44.444	Xiphophorus_maculatus