EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000005056 (Gene tree)
Gene ID: -
Gene Symbol: R3HCC1
Alias: DKFZp564N123
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 54408 bases
Position: chrNBDQ01000068.1:8893137-8947544
Accession: 27329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000006524	R3H	PF01424.22	4.8e-16	1	1
ENSVVUP00000006534	R3H	PF01424.22	4.8e-16	1	1
ENSVVUP00000006539	R3H	PF01424.22	5e-16	1	1
ENSVVUP00000006519	R3H	PF01424.22	5e-16	1	1
ENSVVUP00000006530	R3H	PF01424.22	7.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000008701	R3HCC1-202	1641	-	ENSVVUP00000006524	458 (aa)	-	-
ENSVVUT00000008724	R3HCC1-205	1751	-	ENSVVUP00000006539	468 (aa)	-	-
ENSVVUT00000008696	R3HCC1-201	1668	-	ENSVVUP00000006519	467 (aa)	-	-
ENSVVUT00000008720	R3HCC1-204	1678	-	ENSVVUP00000006534	484 (aa)	-	-
ENSVVUT00000008709	R3HCC1-203	1979	-	ENSVVUP00000006530	598 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000005056's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000005056's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000005056	R3HCC1	96	78.281	ENSG00000104679	R3HCC1	100	100.000	Homo_sapiens
ENSVVUG00000005056	R3HCC1	76	39.000	ENSAPOG00000003616	r3hcc1	72	44.371	Acanthochromis_polyacanthus
ENSVVUG00000005056	R3HCC1	97	89.438	ENSAMEG00000002963	R3HCC1	95	88.521	Ailuropoda_melanoleuca
ENSVVUG00000005056	R3HCC1	89	35.012	ENSAOCG00000003945	r3hcc1	97	34.135	Amphiprion_ocellaris
ENSVVUG00000005056	R3HCC1	89	34.286	ENSAPEG00000003613	r3hcc1	97	33.573	Amphiprion_percula
ENSVVUG00000005056	R3HCC1	63	40.116	ENSATEG00000023860	r3hcc1	70	41.615	Anabas_testudineus
ENSVVUG00000005056	R3HCC1	94	46.389	ENSACAG00000016627	R3HCC1	97	46.925	Anolis_carolinensis
ENSVVUG00000005056	R3HCC1	96	76.351	ENSANAG00000036169	R3HCC1	99	76.356	Aotus_nancymaae
ENSVVUG00000005056	R3HCC1	98	75.711	ENSBTAG00000025830	R3HCC1	99	75.055	Bos_taurus
ENSVVUG00000005056	R3HCC1	96	76.471	ENSCJAG00000020118	R3HCC1	99	69.954	Callithrix_jacchus
ENSVVUG00000005056	R3HCC1	100	97.598	ENSCAFG00000009210	R3HCC1	100	97.598	Canis_familiaris
ENSVVUG00000005056	R3HCC1	81	96.505	ENSCAFG00020012870	R3HCC1	89	95.238	Canis_lupus_dingo
ENSVVUG00000005056	R3HCC1	96	70.306	ENSCHIG00000009107	R3HCC1	100	69.651	Capra_hircus
ENSVVUG00000005056	R3HCC1	98	79.029	ENSTSYG00000000511	R3HCC1	83	77.542	Carlito_syrichta
ENSVVUG00000005056	R3HCC1	85	56.481	ENSCAPG00000015813	R3HCC1	100	56.481	Cavia_aperea
ENSVVUG00000005056	R3HCC1	95	64.059	ENSCPOG00000009696	R3HCC1	100	64.059	Cavia_porcellus
ENSVVUG00000005056	R3HCC1	96	76.923	ENSCCAG00000037811	R3HCC1	96	76.724	Cebus_capucinus
ENSVVUG00000005056	R3HCC1	96	78.281	ENSCATG00000032971	R3HCC1	99	70.183	Cercocebus_atys
ENSVVUG00000005056	R3HCC1	97	71.910	ENSCLAG00000015556	R3HCC1	90	69.936	Chinchilla_lanigera
ENSVVUG00000005056	R3HCC1	96	78.507	ENSCSAG00000016250	R3HCC1	95	76.821	Chlorocebus_sabaeus
ENSVVUG00000005056	R3HCC1	95	73.409	ENSCHOG00000000396	R3HCC1	96	73.409	Choloepus_hoffmanni
ENSVVUG00000005056	R3HCC1	96	78.330	ENSCANG00000029441	R3HCC1	93	77.928	Colobus_angolensis_palliatus
ENSVVUG00000005056	R3HCC1	94	61.378	ENSCGRG00001014977	R3hcc1	99	61.587	Cricetulus_griseus_chok1gshd
ENSVVUG00000005056	R3HCC1	94	61.378	ENSCGRG00000004454	R3hcc1	99	61.587	Cricetulus_griseus_crigri
ENSVVUG00000005056	R3HCC1	91	34.318	ENSCSEG00000005748	r3hcc1	76	46.711	Cynoglossus_semilaevis
ENSVVUG00000005056	R3HCC1	78	32.300	ENSCVAG00000002640	r3hcc1	95	31.266	Cyprinodon_variegatus
ENSVVUG00000005056	R3HCC1	92	35.697	ENSDARG00000099593	r3hcc1	98	34.198	Danio_rerio
ENSVVUG00000005056	R3HCC1	96	77.079	ENSDNOG00000007168	R3HCC1	94	76.444	Dasypus_novemcinctus
ENSVVUG00000005056	R3HCC1	94	61.378	ENSDORG00000026365	R3hcc1	99	64.693	Dipodomys_ordii
ENSVVUG00000005056	R3HCC1	96	66.817	ENSETEG00000001147	R3HCC1	97	67.043	Echinops_telfairi
ENSVVUG00000005056	R3HCC1	97	81.390	ENSEASG00005018782	R3HCC1	81	81.614	Equus_asinus_asinus
ENSVVUG00000005056	R3HCC1	97	80.717	ENSECAG00000025013	R3HCC1	99	80.269	Equus_caballus
ENSVVUG00000005056	R3HCC1	97	73.602	ENSEEUG00000011918	R3HCC1	98	73.933	Erinaceus_europaeus
ENSVVUG00000005056	R3HCC1	89	35.104	ENSELUG00000023650	r3hcc1	77	44.444	Esox_lucius
ENSVVUG00000005056	R3HCC1	98	88.170	ENSFCAG00000012395	R3HCC1	100	87.445	Felis_catus
ENSVVUG00000005056	R3HCC1	68	50.000	ENSFALG00000001646	R3HCC1	61	50.000	Ficedula_albicollis
ENSVVUG00000005056	R3HCC1	95	65.076	ENSFDAG00000001572	R3HCC1	99	64.859	Fukomys_damarensis
ENSVVUG00000005056	R3HCC1	96	35.141	ENSGAFG00000008747	-	95	34.615	Gambusia_affinis
ENSVVUG00000005056	R3HCC1	93	34.862	ENSGACG00000008447	r3hcc1	97	34.253	Gasterosteus_aculeatus
ENSVVUG00000005056	R3HCC1	96	78.912	ENSGGOG00000013817	R3HCC1	99	78.391	Gorilla_gorilla
ENSVVUG00000005056	R3HCC1	95	70.938	ENSHGLG00000010517	R3HCC1	94	68.803	Heterocephalus_glaber_female
ENSVVUG00000005056	R3HCC1	95	70.938	ENSHGLG00100006388	R3HCC1	94	68.803	Heterocephalus_glaber_male
ENSVVUG00000005056	R3HCC1	64	45.578	ENSHCOG00000011745	r3hcc1	72	44.444	Hippocampus_comes
ENSVVUG00000005056	R3HCC1	97	36.547	ENSIPUG00000024504	r3hcc1	91	36.784	Ictalurus_punctatus
ENSVVUG00000005056	R3HCC1	95	67.342	ENSSTOG00000027130	R3HCC1	96	67.188	Ictidomys_tridecemlineatus
ENSVVUG00000005056	R3HCC1	94	63.617	ENSJJAG00000013075	R3hcc1	99	65.795	Jaculus_jaculus
ENSVVUG00000005056	R3HCC1	55	46.212	ENSKMAG00000000286	r3hcc1	71	40.764	Kryptolebias_marmoratus
ENSVVUG00000005056	R3HCC1	93	43.177	ENSLACG00000011894	R3HCC1	97	41.216	Latimeria_chalumnae
ENSVVUG00000005056	R3HCC1	93	35.666	ENSLOCG00000015442	r3hcc1	94	34.753	Lepisosteus_oculatus
ENSVVUG00000005056	R3HCC1	96	67.288	ENSLAFG00000016137	R3HCC1	96	69.008	Loxodonta_africana
ENSVVUG00000005056	R3HCC1	96	78.054	ENSMFAG00000032894	R3HCC1	99	69.954	Macaca_fascicularis
ENSVVUG00000005056	R3HCC1	96	78.054	ENSMMUG00000016655	R3HCC1	99	69.954	Macaca_mulatta
ENSVVUG00000005056	R3HCC1	96	78.054	ENSMNEG00000043283	R3HCC1	99	69.954	Macaca_nemestrina
ENSVVUG00000005056	R3HCC1	96	78.054	ENSMLEG00000030147	R3HCC1	92	77.652	Mandrillus_leucophaeus
ENSVVUG00000005056	R3HCC1	87	31.075	ENSMAMG00000018146	r3hcc1	98	31.905	Mastacembelus_armatus
ENSVVUG00000005056	R3HCC1	94	47.846	ENSMGAG00000001356	R3HCC1	92	47.556	Meleagris_gallopavo
ENSVVUG00000005056	R3HCC1	97	75.730	ENSMICG00000011146	R3HCC1	98	74.891	Microcebus_murinus
ENSVVUG00000005056	R3HCC1	95	61.475	ENSMOCG00000018508	R3hcc1	99	60.656	Microtus_ochrogaster
ENSVVUG00000005056	R3HCC1	93	51.770	ENSMODG00000016809	-	100	51.209	Monodelphis_domestica
ENSVVUG00000005056	R3HCC1	87	32.458	ENSMALG00000000731	r3hcc1	98	32.220	Monopterus_albus
ENSVVUG00000005056	R3HCC1	96	60.202	MGP_CAROLIEiJ_G0019467	R3hcc1	99	57.576	Mus_caroli
ENSVVUG00000005056	R3HCC1	96	59.798	ENSMUSG00000034194	R3hcc1	99	58.848	Mus_musculus
ENSVVUG00000005056	R3HCC1	94	58.621	MGP_PahariEiJ_G0030484	R3hcc1	81	77.070	Mus_pahari
ENSVVUG00000005056	R3HCC1	96	59.759	MGP_SPRETEiJ_G0020359	R3hcc1	99	58.811	Mus_spretus
ENSVVUG00000005056	R3HCC1	97	88.764	ENSMPUG00000003457	R3HCC1	90	87.859	Mustela_putorius_furo
ENSVVUG00000005056	R3HCC1	96	77.703	ENSMLUG00000000266	R3HCC1	97	77.468	Myotis_lucifugus
ENSVVUG00000005056	R3HCC1	95	66.228	ENSNGAG00000016747	R3hcc1	99	67.325	Nannospalax_galili
ENSVVUG00000005056	R3HCC1	95	72.273	ENSNLEG00000015944	R3HCC1	94	70.087	Nomascus_leucogenys
ENSVVUG00000005056	R3HCC1	95	57.403	ENSMEUG00000010587	R3HCC1	98	56.948	Notamacropus_eugenii
ENSVVUG00000005056	R3HCC1	96	67.342	ENSOPRG00000013390	R3HCC1	97	66.815	Ochotona_princeps
ENSVVUG00000005056	R3HCC1	93	65.302	ENSODEG00000007529	R3HCC1	99	65.328	Octodon_degus
ENSVVUG00000005056	R3HCC1	95	59.101	ENSOANG00000013877	R3HCC1	97	58.969	Ornithorhynchus_anatinus
ENSVVUG00000005056	R3HCC1	96	67.043	ENSOCUG00000023554	R3HCC1	88	66.372	Oryctolagus_cuniculus
ENSVVUG00000005056	R3HCC1	87	33.333	ENSORLG00000016816	r3hcc1	99	32.039	Oryzias_latipes
ENSVVUG00000005056	R3HCC1	67	33.252	ENSORLG00020012005	r3hcc1	97	31.852	Oryzias_latipes_hni
ENSVVUG00000005056	R3HCC1	87	33.744	ENSORLG00015007018	r3hcc1	99	32.688	Oryzias_latipes_hsok
ENSVVUG00000005056	R3HCC1	88	33.575	ENSOMEG00000000816	r3hcc1	99	32.212	Oryzias_melastigma
ENSVVUG00000005056	R3HCC1	96	74.091	ENSOGAG00000001291	R3HCC1	93	72.273	Otolemur_garnettii
ENSVVUG00000005056	R3HCC1	98	75.165	ENSOARG00000010146	R3HCC1	99	74.505	Ovis_aries
ENSVVUG00000005056	R3HCC1	96	78.281	ENSPPAG00000033165	R3HCC1	99	77.574	Pan_paniscus
ENSVVUG00000005056	R3HCC1	94	87.963	ENSPPRG00000002522	R3HCC1	99	88.194	Panthera_pardus
ENSVVUG00000005056	R3HCC1	87	86.432	ENSPTIG00000011230	R3HCC1	95	86.683	Panthera_tigris_altaica
ENSVVUG00000005056	R3HCC1	95	78.815	ENSPTRG00000020076	R3HCC1	99	72.748	Pan_troglodytes
ENSVVUG00000005056	R3HCC1	96	78.281	ENSPANG00000000453	R3HCC1	92	78.507	Papio_anubis
ENSVVUG00000005056	R3HCC1	85	35.980	ENSPKIG00000020397	-	94	35.427	Paramormyrops_kingsleyae
ENSVVUG00000005056	R3HCC1	85	36.855	ENSPKIG00000014426	-	93	37.186	Paramormyrops_kingsleyae
ENSVVUG00000005056	R3HCC1	94	47.872	ENSPSIG00000017664	R3HCC1	98	48.261	Pelodiscus_sinensis
ENSVVUG00000005056	R3HCC1	95	61.587	ENSPEMG00000007118	R3hcc1	99	62.839	Peromyscus_maniculatus_bairdii
ENSVVUG00000005056	R3HCC1	87	50.935	ENSPCIG00000022718	-	85	52.555	Phascolarctos_cinereus
ENSVVUG00000005056	R3HCC1	92	34.318	ENSPFOG00000022301	r3hcc1	95	34.047	Poecilia_formosa
ENSVVUG00000005056	R3HCC1	92	34.642	ENSPLAG00000010794	r3hcc1	95	33.833	Poecilia_latipinna
ENSVVUG00000005056	R3HCC1	92	34.318	ENSPMEG00000022515	r3hcc1	95	34.047	Poecilia_mexicana
ENSVVUG00000005056	R3HCC1	92	35.714	ENSPREG00000000713	r3hcc1	95	34.576	Poecilia_reticulata
ENSVVUG00000005056	R3HCC1	87	77.419	ENSPPYG00000018436	R3HCC1	99	76.923	Pongo_abelii
ENSVVUG00000005056	R3HCC1	73	82.895	ENSPCAG00000012229	R3HCC1	74	82.895	Procavia_capensis
ENSVVUG00000005056	R3HCC1	95	75.346	ENSPCOG00000027554	R3HCC1	99	76.037	Propithecus_coquereli
ENSVVUG00000005056	R3HCC1	96	76.577	ENSPVAG00000009829	R3HCC1	97	75.901	Pteropus_vampyrus
ENSVVUG00000005056	R3HCC1	90	33.735	ENSPNAG00000023875	r3hcc1	76	44.681	Pygocentrus_nattereri
ENSVVUG00000005056	R3HCC1	100	58.550	ENSRNOG00000016777	AABR07018321.1	83	60.359	Rattus_norvegicus
ENSVVUG00000005056	R3HCC1	95	78.032	ENSRBIG00000028045	R3HCC1	99	77.574	Rhinopithecus_bieti
ENSVVUG00000005056	R3HCC1	96	78.104	ENSRROG00000031126	R3HCC1	99	70.413	Rhinopithecus_roxellana
ENSVVUG00000005056	R3HCC1	94	77.931	ENSSBOG00000022590	R3HCC1	99	77.471	Saimiri_boliviensis_boliviensis
ENSVVUG00000005056	R3HCC1	95	52.759	ENSSHAG00000016526	-	99	52.318	Sarcophilus_harrisii
ENSVVUG00000005056	R3HCC1	87	37.621	ENSSFOG00015013507	r3hcc1	98	37.905	Scleropages_formosus
ENSVVUG00000005056	R3HCC1	87	32.134	ENSSMAG00000008647	r3hcc1	98	31.250	Scophthalmus_maximus
ENSVVUG00000005056	R3HCC1	90	32.889	ENSSLDG00000019031	r3hcc1	97	32.886	Seriola_lalandi_dorsalis
ENSVVUG00000005056	R3HCC1	68	79.021	ENSSARG00000013514	-	71	79.021	Sorex_araneus
ENSVVUG00000005056	R3HCC1	89	33.181	ENSSPAG00000013497	r3hcc1	98	31.868	Stegastes_partitus
ENSVVUG00000005056	R3HCC1	97	71.652	ENSSSCG00000037347	-	92	71.875	Sus_scrofa
ENSVVUG00000005056	R3HCC1	98	80.222	ENSSSCG00000039915	-	98	78.788	Sus_scrofa
ENSVVUG00000005056	R3HCC1	91	32.857	ENSTRUG00000015880	r3hcc1	98	32.220	Takifugu_rubripes
ENSVVUG00000005056	R3HCC1	95	69.178	ENSTTRG00000012247	R3HCC1	96	71.233	Tursiops_truncatus
ENSVVUG00000005056	R3HCC1	96	88.409	ENSUAMG00000007344	R3HCC1	100	88.409	Ursus_americanus
ENSVVUG00000005056	R3HCC1	59	45.833	ENSXCOG00000017626	r3hcc1	89	33.879	Xiphophorus_couchianus
ENSVVUG00000005056	R3HCC1	64	46.154	ENSXMAG00000018375	r3hcc1	95	34.335	Xiphophorus_maculatus