EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSVVUG00000005215 (Gene tree)
Gene ID
-
Gene Symbol
PABPC4
Alias
APP-1|iPABP
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Vulpes_vulpes
Status
putative
Strand
Minus strand
Length
14479 bases
Position
chrNBDQ01000184.1:3038620-3053098
Accession
112908225
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSVVUP00000006775PABPPF00658.182.4e-3111
ENSVVUP00000006765PABPPF00658.182.7e-3111
ENSVVUP00000006775RRM_5PF13893.64e-0912
ENSVVUP00000006775RRM_5PF13893.64e-0922
ENSVVUP00000006765RRM_5PF13893.65e-0912
ENSVVUP00000006765RRM_5PF13893.65e-0922
ENSVVUP00000006775RRM_1PF00076.224.5e-9214
ENSVVUP00000006775RRM_1PF00076.224.5e-9224
ENSVVUP00000006775RRM_1PF00076.224.5e-9234
ENSVVUP00000006775RRM_1PF00076.224.5e-9244
ENSVVUP00000006765RRM_1PF00076.225.8e-9214
ENSVVUP00000006765RRM_1PF00076.225.8e-9224
ENSVVUP00000006765RRM_1PF00076.225.8e-9234
ENSVVUP00000006765RRM_1PF00076.225.8e-9244
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSVVUT00000008984PABPC4-2012747XM_025983685ENSVVUP00000006765660 (aa)XP_025839470UPI00005A2D06
ENSVVUT00000008996PABPC4-2022660XM_025983690ENSVVUP00000006775631 (aa)XP_025839475UPI00004BC244
Gene Model
Click here to download ENSVVUG00000005215's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000005215's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSVVUG00000005215PABPC45730.370ENSVVUG00000028040TIA16530.370
ENSVVUG00000005215PABPC45867.697ENSVVUG00000013172PABPC59567.493
ENSVVUG00000005215PABPC45837.500ENSVVUG00000006430CELF26137.500
ENSVVUG00000005215PABPC45930.625ENSVVUG00000006175ELAVL49030.625
ENSVVUG00000005215PABPC49876.680ENSVVUG00000018939PABPC1L9976.680
ENSVVUG00000005215PABPC46070.060ENSVVUG00000011060-7670.060
ENSVVUG00000005215PABPC45975.500ENSVVUG00000015892-9775.879
ENSVVUG00000005215PABPC45730.220ENSVVUG00000011029TIAL17130.682
ENSVVUG00000005215PABPC45931.579ENSVVUG00000021291ELAVL28334.940
ENSVVUG00000005215PABPC49876.842ENSVVUG00000013156PABPC19976.667
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSVVUG00000005215PABPC410099.208ENSG00000090621PABPC4100100.000Homo_sapiens
ENSVVUG00000005215PABPC49983.043ENSAPOG00000001161pabpc410083.281Acanthochromis_polyacanthus
ENSVVUG00000005215PABPC410099.848ENSAMEG00000011535-10099.848Ailuropoda_melanoleuca
ENSVVUG00000005215PABPC49857.395ENSAMEG00000015083-9957.074Ailuropoda_melanoleuca
ENSVVUG00000005215PABPC410083.594ENSACIG00000023343pabpc410084.219Amphilophus_citrinellus
ENSVVUG00000005215PABPC49983.518ENSAOCG00000021529pabpc410083.750Amphiprion_ocellaris
ENSVVUG00000005215PABPC49983.518ENSAPEG00000019196pabpc410083.750Amphiprion_percula
ENSVVUG00000005215PABPC49982.622ENSATEG00000007402pabpc410082.071Anabas_testudineus
ENSVVUG00000005215PABPC49991.587ENSAPLG00000009729-10091.587Anas_platyrhynchos
ENSVVUG00000005215PABPC49989.982ENSACAG00000002544PABPC410089.982Anolis_carolinensis
ENSVVUG00000005215PABPC410099.049ENSANAG00000025079PABPC410099.049Aotus_nancymaae
ENSVVUG00000005215PABPC410083.125ENSACLG00000019558pabpc410083.204Astatotilapia_calliptera
ENSVVUG00000005215PABPC49979.081ENSAMXG00000018779pabpc49979.873Astyanax_mexicanus
ENSVVUG00000005215PABPC45786.826ENSBTAG00000048536-9886.826Bos_taurus
ENSVVUG00000005215PABPC410096.672ENSBTAG00000017125PABPC410096.672Bos_taurus
ENSVVUG00000005215PABPC47789.344ENSCJAG00000045953-9289.300Callithrix_jacchus
ENSVVUG00000005215PABPC410098.891ENSCJAG00000002512-10098.891Callithrix_jacchus
ENSVVUG00000005215PABPC4100100.000ENSCAFG00000003081PABPC4100100.000Canis_familiaris
ENSVVUG00000005215PABPC4100100.000ENSCAFG00020004161PABPC4100100.000Canis_lupus_dingo
ENSVVUG00000005215PABPC410076.515ENSCHIG00000023385-10076.515Capra_hircus
ENSVVUG00000005215PABPC410099.242ENSCHIG00000019398-10099.242Capra_hircus
ENSVVUG00000005215PABPC410099.208ENSTSYG00000006532PABPC410099.208Carlito_syrichta
ENSVVUG00000005215PABPC49998.887ENSCAPG00000015984PABPC410098.887Cavia_aperea
ENSVVUG00000005215PABPC410098.891ENSCPOG00000009552PABPC410098.891Cavia_porcellus
ENSVVUG00000005215PABPC410099.049ENSCCAG00000037306PABPC410099.049Cebus_capucinus
ENSVVUG00000005215PABPC410099.366ENSCATG00000042164PABPC410099.366Cercocebus_atys
ENSVVUG00000005215PABPC410099.049ENSCLAG00000011899PABPC410099.049Chinchilla_lanigera
ENSVVUG00000005215PABPC410099.242ENSCSAG00000001135PABPC410099.242Chlorocebus_sabaeus
ENSVVUG00000005215PABPC48697.889ENSCHOG00000005327PABPC48197.889Choloepus_hoffmanni
ENSVVUG00000005215PABPC49991.905ENSCPBG00000001038PABPC410091.905Chrysemys_picta_bellii
ENSVVUG00000005215PABPC49999.196ENSCANG00000034177PABPC410099.196Colobus_angolensis_palliatus
ENSVVUG00000005215PABPC410097.289ENSCGRG00001018166Pabpc410097.289Cricetulus_griseus_chok1gshd
ENSVVUG00000005215PABPC49994.962ENSCGRG00000009777Pabpc410094.962Cricetulus_griseus_crigri
ENSVVUG00000005215PABPC410082.500ENSCSEG00000000130pabpc410083.125Cynoglossus_semilaevis
ENSVVUG00000005215PABPC49983.784ENSCVAG00000019246pabpc410083.861Cyprinodon_variegatus
ENSVVUG00000005215PABPC49985.079ENSDARG00000059259pabpc410085.855Danio_rerio
ENSVVUG00000005215PABPC49999.643ENSDNOG00000018444-10099.643Dasypus_novemcinctus
ENSVVUG00000005215PABPC410096.667ENSDORG00000011581Pabpc410096.667Dipodomys_ordii
ENSVVUG00000005215PABPC4100100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSVVUG00000005215PABPC48665.000ENSETEG00000009172-9965.018Echinops_telfairi
ENSVVUG00000005215PABPC49776.898ENSEBUG00000013782pabpc49976.266Eptatretus_burgeri
ENSVVUG00000005215PABPC49976.741ENSEBUG00000000992pabpc49980.346Eptatretus_burgeri
ENSVVUG00000005215PABPC410099.545ENSEASG00005014119PABPC410099.545Equus_asinus_asinus
ENSVVUG00000005215PABPC410099.545ENSECAG00000009396PABPC410099.545Equus_caballus
ENSVVUG00000005215PABPC410095.909ENSEEUG00000002962PABPC410095.909Erinaceus_europaeus
ENSVVUG00000005215PABPC49983.758ENSELUG00000003195pabpc49884.335Esox_lucius
ENSVVUG00000005215PABPC4100100.000ENSFCAG00000015254-100100.000Felis_catus
ENSVVUG00000005215PABPC49991.111ENSFALG00000000543PABPC410091.111Ficedula_albicollis
ENSVVUG00000005215PABPC49066.872ENSFDAG00000010581-10062.857Fukomys_damarensis
ENSVVUG00000005215PABPC410099.091ENSFDAG00000020016-10099.091Fukomys_damarensis
ENSVVUG00000005215PABPC410083.568ENSFHEG00000007548pabpc49391.031Fundulus_heteroclitus
ENSVVUG00000005215PABPC49982.808ENSGMOG00000019025pabpc49983.438Gadus_morhua
ENSVVUG00000005215PABPC49992.063ENSGALG00000003800PABPC410092.063Gallus_gallus
ENSVVUG00000005215PABPC410082.915ENSGAFG00000018195pabpc49895.556Gambusia_affinis
ENSVVUG00000005215PABPC410081.591ENSGACG00000007179pabpc410082.215Gasterosteus_aculeatus
ENSVVUG00000005215PABPC49991.746ENSGAGG00000001888PABPC410091.746Gopherus_agassizii
ENSVVUG00000005215PABPC410099.208ENSGGOG00000004002PABPC410099.208Gorilla_gorilla
ENSVVUG00000005215PABPC410083.281ENSHBUG00000020206pabpc410083.359Haplochromis_burtoni
ENSVVUG00000005215PABPC410099.366ENSHGLG00000011162PABPC410099.366Heterocephalus_glaber_female
ENSVVUG00000005215PABPC410099.366ENSHGLG00100001580PABPC410099.366Heterocephalus_glaber_male
ENSVVUG00000005215PABPC410082.160ENSHCOG00000012694pabpc410082.812Hippocampus_comes
ENSVVUG00000005215PABPC49883.307ENSIPUG00000016620pabpc49983.333Ictalurus_punctatus
ENSVVUG00000005215PABPC410096.830ENSSTOG00000010416PABPC410096.830Ictidomys_tridecemlineatus
ENSVVUG00000005215PABPC410094.848ENSJJAG00000007781Pabpc410094.848Jaculus_jaculus
ENSVVUG00000005215PABPC49991.076ENSKMAG00000013597pabpc49982.188Kryptolebias_marmoratus
ENSVVUG00000005215PABPC410082.426ENSLBEG00000013654pabpc410082.143Labrus_bergylta
ENSVVUG00000005215PABPC49988.170ENSLACG00000011907PABPC410088.170Latimeria_chalumnae
ENSVVUG00000005215PABPC49985.827ENSLOCG00000001877pabpc49986.614Lepisosteus_oculatus
ENSVVUG00000005215PABPC410099.545ENSLAFG00000000151PABPC410099.545Loxodonta_africana
ENSVVUG00000005215PABPC410099.366ENSMFAG00000041481PABPC410099.366Macaca_fascicularis
ENSVVUG00000005215PABPC410099.242ENSMMUG00000007497PABPC410099.242Macaca_mulatta
ENSVVUG00000005215PABPC410099.208ENSMNEG00000043054PABPC410099.208Macaca_nemestrina
ENSVVUG00000005215PABPC410099.366ENSMLEG00000040716PABPC410099.366Mandrillus_leucophaeus
ENSVVUG00000005215PABPC49982.884ENSMAMG00000010025pabpc49982.059Mastacembelus_armatus
ENSVVUG00000005215PABPC410082.969ENSMZEG00005006141pabpc410083.048Maylandia_zebra
ENSVVUG00000005215PABPC49988.075ENSMGAG00000005408PABPC410088.075Meleagris_gallopavo
ENSVVUG00000005215PABPC47795.413ENSMAUG00000019763-8495.413Mesocricetus_auratus
ENSVVUG00000005215PABPC45781.287ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSVVUG00000005215PABPC47289.423ENSMAUG00000001295-9789.423Mesocricetus_auratus
ENSVVUG00000005215PABPC48996.441ENSMICG00000016633-10096.441Microcebus_murinus
ENSVVUG00000005215PABPC49984.725ENSMICG00000036729-10085.258Microcebus_murinus
ENSVVUG00000005215PABPC410097.795ENSMOCG00000006763Pabpc410097.795Microtus_ochrogaster
ENSVVUG00000005215PABPC410080.503ENSMMOG00000002363pabpc49981.790Mola_mola
ENSVVUG00000005215PABPC45974.011ENSMODG00000018051-9174.011Monodelphis_domestica
ENSVVUG00000005215PABPC49889.198ENSMODG00000017657-10088.788Monodelphis_domestica
ENSVVUG00000005215PABPC49982.780ENSMALG00000011017pabpc410082.481Monopterus_albus
ENSVVUG00000005215PABPC49983.729MGP_CAROLIEiJ_G0024864-10083.729Mus_caroli
ENSVVUG00000005215PABPC410097.576MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSVVUG00000005215PABPC410098.098ENSMUSG00000011257Pabpc410099.405Mus_musculus
ENSVVUG00000005215PABPC49997.696MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSVVUG00000005215PABPC49978.752MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSVVUG00000005215PABPC49553.477ENSMPUG00000006836-10053.311Mustela_putorius_furo
ENSVVUG00000005215PABPC410099.848ENSMPUG00000014414-10099.848Mustela_putorius_furo
ENSVVUG00000005215PABPC410096.830ENSMLUG00000012068PABPC410096.830Myotis_lucifugus
ENSVVUG00000005215PABPC410096.830ENSNGAG00000018292Pabpc410096.830Nannospalax_galili
ENSVVUG00000005215PABPC46786.441ENSNBRG00000010047-7586.441Neolamprologus_brichardi
ENSVVUG00000005215PABPC45992.788ENSNBRG00000009708pabpc49892.788Neolamprologus_brichardi
ENSVVUG00000005215PABPC410099.366ENSNLEG00000011928PABPC410099.366Nomascus_leucogenys
ENSVVUG00000005215PABPC48598.737ENSOPRG00000011984PABPC48798.737Ochotona_princeps
ENSVVUG00000005215PABPC410098.574ENSODEG00000006592-10098.574Octodon_degus
ENSVVUG00000005215PABPC49989.528ENSODEG00000017434-10089.409Octodon_degus
ENSVVUG00000005215PABPC45385.714ENSODEG00000013457-10085.714Octodon_degus
ENSVVUG00000005215PABPC410083.281ENSONIG00000008176pabpc410083.906Oreochromis_niloticus
ENSVVUG00000005215PABPC49991.429ENSOANG00000010001PABPC410091.429Ornithorhynchus_anatinus
ENSVVUG00000005215PABPC49698.892ENSOCUG00000000562PABPC48898.892Oryctolagus_cuniculus
ENSVVUG00000005215PABPC49991.049ENSORLG00000017479pabpc49991.049Oryzias_latipes
ENSVVUG00000005215PABPC49991.049ENSORLG00020018644pabpc49991.049Oryzias_latipes_hni
ENSVVUG00000005215PABPC49991.049ENSORLG00015015042pabpc49991.049Oryzias_latipes_hsok
ENSVVUG00000005215PABPC49983.201ENSOMEG00000014410pabpc49983.648Oryzias_melastigma
ENSVVUG00000005215PABPC410096.682ENSOGAG00000004067PABPC410096.682Otolemur_garnettii
ENSVVUG00000005215PABPC410099.242ENSOARG00000020060PABPC410099.242Ovis_aries
ENSVVUG00000005215PABPC410099.208ENSPPAG00000043625PABPC410099.208Pan_paniscus
ENSVVUG00000005215PABPC4100100.000ENSPPRG00000024727PABPC4100100.000Panthera_pardus
ENSVVUG00000005215PABPC4100100.000ENSPTIG00000005829PABPC4100100.000Panthera_tigris_altaica
ENSVVUG00000005215PABPC410099.208ENSPTRG00000000573PABPC410099.208Pan_troglodytes
ENSVVUG00000005215PABPC410099.525ENSPANG00000009484PABPC410099.525Papio_anubis
ENSVVUG00000005215PABPC49984.968ENSPKIG00000025356pabpc49985.601Paramormyrops_kingsleyae
ENSVVUG00000005215PABPC49991.905ENSPSIG00000016892PABPC410091.905Pelodiscus_sinensis
ENSVVUG00000005215PABPC410081.732ENSPMGG00000009073pabpc49980.818Periophthalmus_magnuspinnatus
ENSVVUG00000005215PABPC410091.181ENSPEMG00000024193-9991.181Peromyscus_maniculatus_bairdii
ENSVVUG00000005215PABPC410097.306ENSPEMG00000023569-9997.306Peromyscus_maniculatus_bairdii
ENSVVUG00000005215PABPC48973.657ENSPMAG00000002836pabpc410074.177Petromyzon_marinus
ENSVVUG00000005215PABPC49571.107ENSPMAG00000007885pabpc410069.625Petromyzon_marinus
ENSVVUG00000005215PABPC49794.033ENSPCIG00000020674PABPC410094.033Phascolarctos_cinereus
ENSVVUG00000005215PABPC410082.942ENSPFOG00000002682pabpc410084.038Poecilia_formosa
ENSVVUG00000005215PABPC410082.786ENSPLAG00000010112pabpc410083.333Poecilia_latipinna
ENSVVUG00000005215PABPC49983.466ENSPMEG00000019739pabpc410084.194Poecilia_mexicana
ENSVVUG00000005215PABPC410083.447ENSPREG00000001589pabpc410083.447Poecilia_reticulata
ENSVVUG00000005215PABPC410099.091ENSPPYG00000001506PABPC410099.091Pongo_abelii
ENSVVUG00000005215PABPC410094.545ENSPCAG00000003341PABPC410094.545Procavia_capensis
ENSVVUG00000005215PABPC410099.367ENSPCOG00000023725-10099.367Propithecus_coquereli
ENSVVUG00000005215PABPC49981.664ENSPCOG00000025882-9594.059Propithecus_coquereli
ENSVVUG00000005215PABPC49998.992ENSPVAG00000002187PABPC410098.992Pteropus_vampyrus
ENSVVUG00000005215PABPC410083.125ENSPNYG00000006134pabpc410083.204Pundamilia_nyererei
ENSVVUG00000005215PABPC410083.255ENSPNAG00000024355pabpc410083.956Pygocentrus_nattereri
ENSVVUG00000005215PABPC410093.485ENSRNOG00000028592AABR07035074.110093.485Rattus_norvegicus
ENSVVUG00000005215PABPC410095.606ENSRNOG00000015642Pabpc410095.606Rattus_norvegicus
ENSVVUG00000005215PABPC410099.366ENSRBIG00000039761PABPC410099.366Rhinopithecus_bieti
ENSVVUG00000005215PABPC410099.366ENSRROG00000033355PABPC410099.366Rhinopithecus_roxellana
ENSVVUG00000005215PABPC410099.208ENSSBOG00000026193PABPC410099.208Saimiri_boliviensis_boliviensis
ENSVVUG00000005215PABPC49892.395ENSSHAG00000018139PABPC410091.905Sarcophilus_harrisii
ENSVVUG00000005215PABPC49985.878ENSSFOG00015023514pabpc49985.878Scleropages_formosus
ENSVVUG00000005215PABPC49982.437ENSSMAG00000009007pabpc49982.104Scophthalmus_maximus
ENSVVUG00000005215PABPC49982.726ENSSDUG00000012683pabpc49588.046Seriola_dumerili
ENSVVUG00000005215PABPC49982.726ENSSLDG00000013025pabpc410082.969Seriola_lalandi_dorsalis
ENSVVUG00000005215PABPC410091.818ENSSARG00000000310PABPC410091.818Sorex_araneus
ENSVVUG00000005215PABPC49990.159ENSSPUG00000003204PABPC410090.159Sphenodon_punctatus
ENSVVUG00000005215PABPC49983.043ENSSPAG00000009252pabpc49983.176Stegastes_partitus
ENSVVUG00000005215PABPC410099.525ENSSSCG00000003660-10099.525Sus_scrofa
ENSVVUG00000005215PABPC48950.673ENSSSCG00000036170-9650.673Sus_scrofa
ENSVVUG00000005215PABPC49987.746ENSTGUG00000001266PABPC410087.746Taeniopygia_guttata
ENSVVUG00000005215PABPC410082.233ENSTRUG00000005907pabpc49982.862Takifugu_rubripes
ENSVVUG00000005215PABPC410078.391ENSTNIG00000016902pabpc49978.391Tetraodon_nigroviridis
ENSVVUG00000005215PABPC49988.067ENSTBEG00000009035PABPC410088.067Tupaia_belangeri
ENSVVUG00000005215PABPC49983.716ENSTTRG00000014340PABPC410087.395Tursiops_truncatus
ENSVVUG00000005215PABPC410099.848ENSUAMG00000000303PABPC410099.848Ursus_americanus
ENSVVUG00000005215PABPC410099.848ENSUMAG00000019585PABPC410099.848Ursus_maritimus
ENSVVUG00000005215PABPC48497.872ENSVPAG00000010041PABPC47797.872Vicugna_pacos
ENSVVUG00000005215PABPC46197.024ENSXETG00000027221-10097.024Xenopus_tropicalis
ENSVVUG00000005215PABPC49983.333ENSXETG00000010946pabpc410083.333Xenopus_tropicalis
ENSVVUG00000005215PABPC49981.282ENSXCOG00000013190pabpc49690.094Xiphophorus_couchianus
ENSVVUG00000005215PABPC410083.099ENSXMAG00000019007pabpc410083.178Xiphophorus_maculatus

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