EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000005268 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 19263 bases
Position: chrNBDQ01000184.1:3173167-3192429
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000006870	RRM_1	PF00076.22	8.3e-21	1	1
ENSVVUP00000006907	RRM_1	PF00076.22	2.1e-18	1	1
ENSVVUP00000006888	RRM_1	PF00076.22	5.8e-13	1	1
ENSVVUP00000006901	RRM_1	PF00076.22	4.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000009154	-	1248	-	ENSVVUP00000006907	340 (aa)	-	-
ENSVVUT00000009124	-	1156	-	ENSVVUP00000006884	375 (aa)	-	-
ENSVVUT00000009148	-	975	-	ENSVVUP00000006901	293 (aa)	-	-
ENSVVUT00000009134	-	1101	-	ENSVVUP00000006888	335 (aa)	-	-
ENSVVUT00000009111	-	2009	-	ENSVVUP00000006875	326 (aa)	-	-
ENSVVUT00000009106	-	2080	-	ENSVVUP00000006870	328 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000005268's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000005268's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000005268	-	92	99.336	ENSG00000084072	PPIE	100	99.336	Homo_sapiens
ENSVVUG00000005268	-	92	85.762	ENSAPOG00000001160	ppie	100	86.093	Acanthochromis_polyacanthus
ENSVVUG00000005268	-	92	82.119	ENSACIG00000022599	ppie	99	82.450	Amphilophus_citrinellus
ENSVVUG00000005268	-	92	85.762	ENSAOCG00000021474	ppie	100	86.093	Amphiprion_ocellaris
ENSVVUG00000005268	-	92	85.762	ENSAPEG00000019253	ppie	100	86.093	Amphiprion_percula
ENSVVUG00000005268	-	92	85.714	ENSATEG00000007395	ppie	100	85.714	Anabas_testudineus
ENSVVUG00000005268	-	92	90.365	ENSACAG00000002688	PPIE	100	90.365	Anolis_carolinensis
ENSVVUG00000005268	-	92	98.339	ENSANAG00000033595	PPIE	100	98.339	Aotus_nancymaae
ENSVVUG00000005268	-	92	85.762	ENSACLG00000019518	ppie	100	86.093	Astatotilapia_calliptera
ENSVVUG00000005268	-	92	86.379	ENSAMXG00000018767	ppie	100	86.379	Astyanax_mexicanus
ENSVVUG00000005268	-	92	98.671	ENSBTAG00000047314	PPIE	100	98.671	Bos_taurus
ENSVVUG00000005268	-	94	95.114	ENSCJAG00000002589	PPIE	100	95.681	Callithrix_jacchus
ENSVVUG00000005268	-	99	95.308	ENSCAFG00000003031	PPIE	100	99.668	Canis_familiaris
ENSVVUG00000005268	-	92	99.668	ENSCAFG00020004132	PPIE	100	99.668	Canis_lupus_dingo
ENSVVUG00000005268	-	90	56.766	ENSCHIG00000023905	-	100	55.446	Capra_hircus
ENSVVUG00000005268	-	92	95.349	ENSCHIG00000012509	-	100	95.349	Capra_hircus
ENSVVUG00000005268	-	92	98.671	ENSTSYG00000000401	PPIE	100	98.671	Carlito_syrichta
ENSVVUG00000005268	-	92	98.007	ENSCPOG00000007365	PPIE	100	98.007	Cavia_porcellus
ENSVVUG00000005268	-	92	99.003	ENSCCAG00000024434	PPIE	100	99.003	Cebus_capucinus
ENSVVUG00000005268	-	92	99.336	ENSCATG00000034495	PPIE	100	99.336	Cercocebus_atys
ENSVVUG00000005268	-	92	92.027	ENSCLAG00000010288	PPIE	100	92.027	Chinchilla_lanigera
ENSVVUG00000005268	-	92	98.684	ENSCSAG00000001131	PPIE	100	98.684	Chlorocebus_sabaeus
ENSVVUG00000005268	-	70	69.264	ENSCHOG00000009018	-	100	69.264	Choloepus_hoffmanni
ENSVVUG00000005268	-	92	89.369	ENSCPBG00000001090	PPIE	100	89.369	Chrysemys_picta_bellii
ENSVVUG00000005268	-	92	99.336	ENSCANG00000029996	PPIE	100	99.336	Colobus_angolensis_palliatus
ENSVVUG00000005268	-	92	98.339	ENSCGRG00001018491	Ppie	100	98.339	Cricetulus_griseus_chok1gshd
ENSVVUG00000005268	-	92	98.339	ENSCGRG00000005685	Ppie	100	98.339	Cricetulus_griseus_crigri
ENSVVUG00000005268	-	92	83.882	ENSCSEG00000000047	ppie	100	83.882	Cynoglossus_semilaevis
ENSVVUG00000005268	-	92	86.047	ENSCVAG00000019238	ppie	100	86.047	Cyprinodon_variegatus
ENSVVUG00000005268	-	92	86.093	ENSDARG00000103234	ppie	91	86.424	Danio_rerio
ENSVVUG00000005268	-	91	98.000	ENSDNOG00000034942	-	99	98.000	Dasypus_novemcinctus
ENSVVUG00000005268	-	91	87.055	ENSDNOG00000002404	-	99	87.055	Dasypus_novemcinctus
ENSVVUG00000005268	-	92	99.003	ENSDORG00000005175	Ppie	100	99.003	Dipodomys_ordii
ENSVVUG00000005268	-	92	96.013	ENSEASG00005014118	-	100	96.013	Equus_asinus_asinus
ENSVVUG00000005268	-	92	96.013	ENSECAG00000038706	-	100	96.013	Equus_caballus
ENSVVUG00000005268	-	92	99.336	ENSECAG00000031692	-	100	99.336	Equus_caballus
ENSVVUG00000005268	-	92	82.781	ENSELUG00000003162	ppie	100	82.781	Esox_lucius
ENSVVUG00000005268	-	92	99.668	ENSFCAG00000006027	-	100	99.668	Felis_catus
ENSVVUG00000005268	-	91	89.298	ENSFALG00000000545	PPIE	93	89.298	Ficedula_albicollis
ENSVVUG00000005268	-	89	96.575	ENSFDAG00000017337	PPIE	97	96.575	Fukomys_damarensis
ENSVVUG00000005268	-	92	86.711	ENSFHEG00000007560	ppie	100	86.711	Fundulus_heteroclitus
ENSVVUG00000005268	-	92	82.119	ENSGMOG00000019015	ppie	100	82.119	Gadus_morhua
ENSVVUG00000005268	-	89	91.781	ENSGALG00000013383	PPIE	91	91.781	Gallus_gallus
ENSVVUG00000005268	-	92	86.047	ENSGAFG00000018146	ppie	100	86.047	Gambusia_affinis
ENSVVUG00000005268	-	92	83.444	ENSGACG00000007165	ppie	100	83.775	Gasterosteus_aculeatus
ENSVVUG00000005268	-	71	93.966	ENSGAGG00000001882	PPIE	95	93.966	Gopherus_agassizii
ENSVVUG00000005268	-	92	99.336	ENSGGOG00000015783	PPIE	100	99.336	Gorilla_gorilla
ENSVVUG00000005268	-	92	85.430	ENSHBUG00000020159	ppie	100	85.762	Haplochromis_burtoni
ENSVVUG00000005268	-	92	97.342	ENSHGLG00000012598	PPIE	100	97.342	Heterocephalus_glaber_female
ENSVVUG00000005268	-	90	96.259	ENSHGLG00100001779	PPIE	98	96.907	Heterocephalus_glaber_male
ENSVVUG00000005268	-	92	85.050	ENSHCOG00000012644	ppie	100	85.050	Hippocampus_comes
ENSVVUG00000005268	-	91	88.704	ENSIPUG00000016601	ppie	99	89.037	Ictalurus_punctatus
ENSVVUG00000005268	-	92	98.671	ENSSTOG00000010445	PPIE	100	98.671	Ictidomys_tridecemlineatus
ENSVVUG00000005268	-	92	98.007	ENSJJAG00000022703	Ppie	100	98.007	Jaculus_jaculus
ENSVVUG00000005268	-	92	85.050	ENSKMAG00000013555	ppie	100	85.050	Kryptolebias_marmoratus
ENSVVUG00000005268	-	92	88.742	ENSLACG00000011207	PPIE	100	88.742	Latimeria_chalumnae
ENSVVUG00000005268	-	92	98.007	ENSLAFG00000028312	-	100	98.007	Loxodonta_africana
ENSVVUG00000005268	-	92	99.336	ENSMFAG00000002082	PPIE	100	99.336	Macaca_fascicularis
ENSVVUG00000005268	-	92	99.336	ENSMMUG00000018869	PPIE	100	99.336	Macaca_mulatta
ENSVVUG00000005268	-	92	99.336	ENSMNEG00000031362	PPIE	100	99.336	Macaca_nemestrina
ENSVVUG00000005268	-	92	99.336	ENSMLEG00000040735	PPIE	100	99.336	Mandrillus_leucophaeus
ENSVVUG00000005268	-	92	83.444	ENSMAMG00000010005	ppie	100	83.775	Mastacembelus_armatus
ENSVVUG00000005268	-	92	85.762	ENSMZEG00005006117	ppie	100	86.093	Maylandia_zebra
ENSVVUG00000005268	-	52	98.225	ENSMAUG00000020323	Ppie	100	98.225	Mesocricetus_auratus
ENSVVUG00000005268	-	92	98.007	ENSMOCG00000018443	-	100	98.007	Microtus_ochrogaster
ENSVVUG00000005268	-	91	93.667	ENSMOCG00000020138	-	84	93.667	Microtus_ochrogaster
ENSVVUG00000005268	-	92	84.385	ENSMMOG00000002329	ppie	100	84.385	Mola_mola
ENSVVUG00000005268	-	92	93.688	ENSMODG00000017659	PPIE	100	93.688	Monodelphis_domestica
ENSVVUG00000005268	-	92	84.437	ENSMALG00000011041	ppie	100	84.106	Monopterus_albus
ENSVVUG00000005268	-	92	98.007	MGP_CAROLIEiJ_G0026431	Ppie	100	98.007	Mus_caroli
ENSVVUG00000005268	-	92	98.339	ENSMUSG00000028651	Ppie	100	98.339	Mus_musculus
ENSVVUG00000005268	-	92	98.007	MGP_PahariEiJ_G0028761	Ppie	100	98.007	Mus_pahari
ENSVVUG00000005268	-	92	98.339	MGP_SPRETEiJ_G0027411	Ppie	100	98.339	Mus_spretus
ENSVVUG00000005268	-	92	99.007	ENSMPUG00000014345	PPIE	100	99.007	Mustela_putorius_furo
ENSVVUG00000005268	-	92	97.342	ENSMLUG00000006201	-	100	97.342	Myotis_lucifugus
ENSVVUG00000005268	-	89	52.090	ENSMLUG00000027940	-	97	54.000	Myotis_lucifugus
ENSVVUG00000005268	-	71	98.276	ENSMLUG00000016233	-	100	98.276	Myotis_lucifugus
ENSVVUG00000005268	-	92	99.336	ENSNLEG00000011979	PPIE	100	99.336	Nomascus_leucogenys
ENSVVUG00000005268	-	70	89.177	ENSMEUG00000005090	PPIE	100	89.177	Notamacropus_eugenii
ENSVVUG00000005268	-	82	85.926	ENSOPRG00000015178	-	99	85.926	Ochotona_princeps
ENSVVUG00000005268	-	92	97.674	ENSODEG00000007670	-	100	97.674	Octodon_degus
ENSVVUG00000005268	-	95	73.333	ENSODEG00000013727	-	77	73.333	Octodon_degus
ENSVVUG00000005268	-	92	85.430	ENSONIG00000008165	ppie	100	85.762	Oreochromis_niloticus
ENSVVUG00000005268	-	92	94.684	ENSOANG00000010003	PPIE	100	93.023	Ornithorhynchus_anatinus
ENSVVUG00000005268	-	92	98.671	ENSOCUG00000007665	PPIE	100	98.671	Oryctolagus_cuniculus
ENSVVUG00000005268	-	92	85.855	ENSORLG00015015095	ppie	100	85.855	Oryzias_latipes_hsok
ENSVVUG00000005268	-	92	85.762	ENSOMEG00000014458	ppie	100	85.762	Oryzias_melastigma
ENSVVUG00000005268	-	92	97.697	ENSOGAG00000003620	PPIE	100	97.697	Otolemur_garnettii
ENSVVUG00000005268	-	92	97.368	ENSOARG00000020124	PPIE	100	97.368	Ovis_aries
ENSVVUG00000005268	-	92	99.336	ENSPPAG00000042403	PPIE	100	99.336	Pan_paniscus
ENSVVUG00000005268	-	92	99.668	ENSPPRG00000014232	PPIE	100	99.668	Panthera_pardus
ENSVVUG00000005268	-	92	99.668	ENSPTIG00000003196	PPIE	100	99.668	Panthera_tigris_altaica
ENSVVUG00000005268	-	92	99.336	ENSPTRG00000000577	PPIE	100	99.336	Pan_troglodytes
ENSVVUG00000005268	-	92	99.336	ENSPANG00000000575	PPIE	100	99.336	Papio_anubis
ENSVVUG00000005268	-	90	90.847	ENSPSIG00000016383	PPIE	88	90.847	Pelodiscus_sinensis
ENSVVUG00000005268	-	92	85.149	ENSPMGG00000009082	ppie	100	85.149	Periophthalmus_magnuspinnatus
ENSVVUG00000005268	-	52	97.633	ENSPEMG00000013681	Ppie	100	97.633	Peromyscus_maniculatus_bairdii
ENSVVUG00000005268	-	92	93.023	ENSPCIG00000021413	PPIE	100	93.023	Phascolarctos_cinereus
ENSVVUG00000005268	-	92	85.099	ENSPFOG00000002535	ppie	100	85.099	Poecilia_formosa
ENSVVUG00000005268	-	92	85.382	ENSPLAG00000010126	ppie	100	85.382	Poecilia_latipinna
ENSVVUG00000005268	-	92	85.382	ENSPMEG00000019748	ppie	100	85.382	Poecilia_mexicana
ENSVVUG00000005268	-	91	85.000	ENSPREG00000001551	ppie	99	85.000	Poecilia_reticulata
ENSVVUG00000005268	-	90	98.639	ENSPPYG00000001501	PPIE	98	98.639	Pongo_abelii
ENSVVUG00000005268	-	85	99.283	ENSPVAG00000002120	PPIE	100	99.283	Pteropus_vampyrus
ENSVVUG00000005268	-	92	83.113	ENSPNYG00000006336	ppie	100	83.444	Pundamilia_nyererei
ENSVVUG00000005268	-	92	87.417	ENSPNAG00000007122	ppie	100	87.417	Pygocentrus_nattereri
ENSVVUG00000005268	-	92	97.342	ENSRNOG00000014762	Ppie	100	97.342	Rattus_norvegicus
ENSVVUG00000005268	-	92	99.336	ENSRBIG00000041625	PPIE	100	99.336	Rhinopithecus_bieti
ENSVVUG00000005268	-	94	96.743	ENSRROG00000044935	PPIE	100	96.346	Rhinopithecus_roxellana
ENSVVUG00000005268	-	92	99.003	ENSSBOG00000035061	PPIE	100	99.003	Saimiri_boliviensis_boliviensis
ENSVVUG00000005268	-	92	92.691	ENSSHAG00000018113	PPIE	100	92.691	Sarcophilus_harrisii
ENSVVUG00000005268	-	92	88.040	ENSSFOG00015007542	ppie	100	88.040	Scleropages_formosus
ENSVVUG00000005268	-	92	85.099	ENSSMAG00000008993	ppie	100	84.768	Scophthalmus_maximus
ENSVVUG00000005268	-	92	85.430	ENSSDUG00000012593	ppie	100	85.430	Seriola_dumerili
ENSVVUG00000005268	-	92	85.430	ENSSLDG00000013079	ppie	100	85.430	Seriola_lalandi_dorsalis
ENSVVUG00000005268	-	85	94.265	ENSSARG00000005703	PPIE	100	94.265	Sorex_araneus
ENSVVUG00000005268	-	88	89.547	ENSSPUG00000003147	PPIE	100	89.547	Sphenodon_punctatus
ENSVVUG00000005268	-	92	86.424	ENSSPAG00000009232	ppie	100	86.755	Stegastes_partitus
ENSVVUG00000005268	-	90	97.297	ENSSSCG00000003664	-	96	98.621	Sus_scrofa
ENSVVUG00000005268	-	71	84.120	ENSTGUG00000001276	PPIE	100	84.120	Taeniopygia_guttata
ENSVVUG00000005268	-	92	85.714	ENSTRUG00000006308	ppie	100	85.714	Takifugu_rubripes
ENSVVUG00000005268	-	92	85.430	ENSTNIG00000016901	ppie	100	85.762	Tetraodon_nigroviridis
ENSVVUG00000005268	-	89	93.898	ENSTTRG00000014385	PPIE	95	93.898	Tursiops_truncatus
ENSVVUG00000005268	-	92	99.668	ENSUMAG00000017319	PPIE	100	99.668	Ursus_maritimus
ENSVVUG00000005268	-	63	98.913	ENSVPAG00000010049	PPIE	100	87.234	Vicugna_pacos
ENSVVUG00000005268	-	92	88.704	ENSXETG00000010944	ppie	100	88.704	Xenopus_tropicalis
ENSVVUG00000005268	-	92	86.047	ENSXMAG00000019027	ppie	100	86.047	Xiphophorus_maculatus