EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000005380 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 172261 bases
Position: chrNBDQ01000185.1:184411-356671
Accession: 112908331
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000007186	Ago_hook	PF10427.9	3.4e-19	1	1
ENSVVUP00000007163	Ago_hook	PF10427.9	3.6e-19	1	1
ENSVVUP00000007124	Ago_hook	PF10427.9	4.4e-19	1	1
ENSVVUP00000007075	Ago_hook	PF10427.9	4.8e-19	1	1
ENSVVUP00000007037	Ago_hook	PF10427.9	4.9e-19	1	1
ENSVVUP00000007143	Ago_hook	PF10427.9	5e-19	1	1
ENSVVUP00000007045	Ago_hook	PF10427.9	5.1e-19	1	1
ENSVVUP00000007063	Ago_hook	PF10427.9	4.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000009332	TNRC6A-202	7458	-	ENSVVUP00000007045	1913 (aa)	-	-
ENSVVUT00000009444	TNRC6A-207	6982	-	ENSVVUP00000007143	1930 (aa)	XP_025839590	UPI000DF6CB57
ENSVVUT00000009324	TNRC6A-201	7546	-	ENSVVUP00000007037	1966 (aa)	-	-
ENSVVUT00000009385	TNRC6A-205	7369	-	ENSVVUP00000007097	1907 (aa)	-	-
ENSVVUT00000009362	TNRC6A-204	7399	-	ENSVVUP00000007075	1917 (aa)	-	-
ENSVVUT00000009350	TNRC6A-203	7425	-	ENSVVUP00000007063	1902 (aa)	-	-
ENSVVUT00000009413	TNRC6A-206	7129	-	ENSVVUP00000007124	1827 (aa)	-	-
ENSVVUT00000009476	TNRC6A-208	6669	-	ENSVVUP00000007163	1851 (aa)	-	-
ENSVVUT00000009501	TNRC6A-209	5316	-	ENSVVUP00000007186	1771 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000005380's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000005380's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000005380	TNRC6A	90	43.343	ENSVVUG00000015268	TNRC6C	95	63.736
ENSVVUG00000005380	TNRC6A	98	53.763	ENSVVUG00000007064	TNRC6B	94	54.404

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000005380	TNRC6A	100	96.591	ENSG00000090905	TNRC6A	99	96.608	Homo_sapiens
ENSVVUG00000005380	TNRC6A	99	98.484	ENSAMEG00000009333	TNRC6A	100	98.484	Ailuropoda_melanoleuca
ENSVVUG00000005380	TNRC6A	99	82.212	ENSAPLG00000009978	TNRC6A	95	92.973	Anas_platyrhynchos
ENSVVUG00000005380	TNRC6A	99	54.528	ENSACAG00000011857	TNRC6A	99	56.420	Anolis_carolinensis
ENSVVUG00000005380	TNRC6A	100	96.331	ENSANAG00000025252	TNRC6A	99	96.350	Aotus_nancymaae
ENSVVUG00000005380	TNRC6A	96	56.538	ENSAMXG00000019919	tnrc6a	99	57.110	Astyanax_mexicanus
ENSVVUG00000005380	TNRC6A	99	96.113	ENSBTAG00000017999	TNRC6A	99	96.113	Bos_taurus
ENSVVUG00000005380	TNRC6A	100	96.136	ENSCJAG00000020677	TNRC6A	99	96.156	Callithrix_jacchus
ENSVVUG00000005380	TNRC6A	100	99.586	ENSCAFG00000017531	TNRC6A	100	99.575	Canis_familiaris
ENSVVUG00000005380	TNRC6A	99	98.426	ENSCAFG00020021160	TNRC6A	100	97.443	Canis_lupus_dingo
ENSVVUG00000005380	TNRC6A	99	95.877	ENSCHIG00000019448	TNRC6A	99	95.877	Capra_hircus
ENSVVUG00000005380	TNRC6A	99	96.087	ENSTSYG00000012711	TNRC6A	99	96.087	Carlito_syrichta
ENSVVUG00000005380	TNRC6A	99	95.246	ENSCPOG00000036684	TNRC6A	99	95.246	Cavia_porcellus
ENSVVUG00000005380	TNRC6A	100	96.482	ENSCCAG00000033664	TNRC6A	99	96.500	Cebus_capucinus
ENSVVUG00000005380	TNRC6A	100	96.319	ENSCATG00000019284	TNRC6A	100	96.319	Cercocebus_atys
ENSVVUG00000005380	TNRC6A	100	91.454	ENSCLAG00000010217	TNRC6A	100	91.454	Chinchilla_lanigera
ENSVVUG00000005380	TNRC6A	100	96.689	ENSCSAG00000006561	TNRC6A	99	96.706	Chlorocebus_sabaeus
ENSVVUG00000005380	TNRC6A	95	91.627	ENSCHOG00000009374	TNRC6A	87	99.459	Choloepus_hoffmanni
ENSVVUG00000005380	TNRC6A	97	80.259	ENSCPBG00000001881	TNRC6A	99	82.506	Chrysemys_picta_bellii
ENSVVUG00000005380	TNRC6A	100	96.844	ENSCANG00000041549	TNRC6A	99	96.861	Colobus_angolensis_palliatus
ENSVVUG00000005380	TNRC6A	99	93.779	ENSCGRG00001015021	Tnrc6a	95	98.919	Cricetulus_griseus_chok1gshd
ENSVVUG00000005380	TNRC6A	99	92.155	ENSCGRG00000013351	Tnrc6a	100	92.103	Cricetulus_griseus_crigri
ENSVVUG00000005380	TNRC6A	96	56.291	ENSDARG00000079688	tnrc6a	95	75.956	Danio_rerio
ENSVVUG00000005380	TNRC6A	98	99.459	ENSDNOG00000013989	TNRC6A	94	99.459	Dasypus_novemcinctus
ENSVVUG00000005380	TNRC6A	99	85.550	ENSETEG00000014658	TNRC6A	99	85.497	Echinops_telfairi
ENSVVUG00000005380	TNRC6A	100	96.636	ENSEASG00005017693	TNRC6A	99	97.171	Equus_asinus_asinus
ENSVVUG00000005380	TNRC6A	100	96.636	ENSECAG00000025056	TNRC6A	100	96.636	Equus_caballus
ENSVVUG00000005380	TNRC6A	98	92.689	ENSEEUG00000004530	TNRC6A	99	89.760	Erinaceus_europaeus
ENSVVUG00000005380	TNRC6A	100	96.530	ENSFCAG00000025236	TNRC6A	100	96.530	Felis_catus
ENSVVUG00000005380	TNRC6A	99	79.907	ENSFALG00000003757	TNRC6A	92	93.514	Ficedula_albicollis
ENSVVUG00000005380	TNRC6A	97	80.912	ENSGALG00000006068	TNRC6A	95	92.973	Gallus_gallus
ENSVVUG00000005380	TNRC6A	97	79.663	ENSGAGG00000023209	TNRC6A	95	92.973	Gopherus_agassizii
ENSVVUG00000005380	TNRC6A	100	96.589	ENSGGOG00000005137	TNRC6A	99	96.607	Gorilla_gorilla
ENSVVUG00000005380	TNRC6A	99	93.133	ENSHGLG00000012474	-	99	93.027	Heterocephalus_glaber_female
ENSVVUG00000005380	TNRC6A	97	72.593	ENSHGLG00000007368	-	93	74.259	Heterocephalus_glaber_female
ENSVVUG00000005380	TNRC6A	98	92.853	ENSHGLG00100012496	-	99	92.800	Heterocephalus_glaber_male
ENSVVUG00000005380	TNRC6A	100	96.319	ENSSTOG00000023394	TNRC6A	100	94.573	Ictidomys_tridecemlineatus
ENSVVUG00000005380	TNRC6A	99	69.747	ENSLACG00000006277	TNRC6A	96	86.486	Latimeria_chalumnae
ENSVVUG00000005380	TNRC6A	98	85.461	ENSLOCG00000005517	tnrc6a	92	83.223	Lepisosteus_oculatus
ENSVVUG00000005380	TNRC6A	97	94.418	ENSLAFG00000004209	TNRC6A	95	100.000	Loxodonta_africana
ENSVVUG00000005380	TNRC6A	99	94.953	ENSMFAG00000003824	TNRC6A	96	100.000	Macaca_fascicularis
ENSVVUG00000005380	TNRC6A	100	96.637	ENSMMUG00000020428	TNRC6A	99	96.655	Macaca_mulatta
ENSVVUG00000005380	TNRC6A	100	96.342	ENSMNEG00000034854	TNRC6A	96	100.000	Macaca_nemestrina
ENSVVUG00000005380	TNRC6A	99	94.551	ENSMLEG00000042737	TNRC6A	92	100.000	Mandrillus_leucophaeus
ENSVVUG00000005380	TNRC6A	97	83.184	ENSMGAG00000006455	TNRC6A	89	92.432	Meleagris_gallopavo
ENSVVUG00000005380	TNRC6A	99	93.717	ENSMAUG00000012750	Tnrc6a	99	93.717	Mesocricetus_auratus
ENSVVUG00000005380	TNRC6A	100	97.339	ENSMICG00000030685	TNRC6A	100	96.702	Microcebus_murinus
ENSVVUG00000005380	TNRC6A	99	93.925	ENSMOCG00000000152	Tnrc6a	99	93.714	Microtus_ochrogaster
ENSVVUG00000005380	TNRC6A	99	93.514	ENSMODG00000016348	TNRC6A	90	93.514	Monodelphis_domestica
ENSVVUG00000005380	TNRC6A	99	92.657	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	94.282	Mus_caroli
ENSVVUG00000005380	TNRC6A	99	93.027	ENSMUSG00000052707	Tnrc6a	99	94.568	Mus_musculus
ENSVVUG00000005380	TNRC6A	99	93.295	MGP_PahariEiJ_G0013635	Tnrc6a	100	94.853	Mus_pahari
ENSVVUG00000005380	TNRC6A	99	93.100	MGP_SPRETEiJ_G0031539	Tnrc6a	100	94.425	Mus_spretus
ENSVVUG00000005380	TNRC6A	99	83.983	ENSMPUG00000012324	TNRC6A	95	100.000	Mustela_putorius_furo
ENSVVUG00000005380	TNRC6A	99	93.382	ENSMLUG00000002701	TNRC6A	100	93.277	Myotis_lucifugus
ENSVVUG00000005380	TNRC6A	99	94.773	ENSNGAG00000020702	Tnrc6a	99	94.773	Nannospalax_galili
ENSVVUG00000005380	TNRC6A	99	93.458	ENSNLEG00000011851	TNRC6A	98	94.244	Nomascus_leucogenys
ENSVVUG00000005380	TNRC6A	76	89.590	ENSMEUG00000015959	-	74	89.590	Notamacropus_eugenii
ENSVVUG00000005380	TNRC6A	95	99.627	ENSOPRG00000005819	TNRC6A	95	99.627	Ochotona_princeps
ENSVVUG00000005380	TNRC6A	99	89.006	ENSODEG00000012802	TNRC6A	99	89.111	Octodon_degus
ENSVVUG00000005380	TNRC6A	93	83.198	ENSOANG00000007672	TNRC6A	94	93.514	Ornithorhynchus_anatinus
ENSVVUG00000005380	TNRC6A	99	92.707	ENSOCUG00000004325	TNRC6A	95	100.000	Oryctolagus_cuniculus
ENSVVUG00000005380	TNRC6A	100	96.587	ENSOGAG00000006666	TNRC6A	100	96.605	Otolemur_garnettii
ENSVVUG00000005380	TNRC6A	99	94.713	ENSOARG00000017950	TNRC6A	98	96.562	Ovis_aries
ENSVVUG00000005380	TNRC6A	100	95.986	ENSPPAG00000028379	TNRC6A	99	96.006	Pan_paniscus
ENSVVUG00000005380	TNRC6A	100	96.530	ENSPPRG00000005861	TNRC6A	99	96.548	Panthera_pardus
ENSVVUG00000005380	TNRC6A	99	95.064	ENSPTIG00000006346	TNRC6A	99	95.116	Panthera_tigris_altaica
ENSVVUG00000005380	TNRC6A	99	95.892	ENSPTRG00000007898	TNRC6A	95	100.000	Pan_troglodytes
ENSVVUG00000005380	TNRC6A	99	100.000	ENSPANG00000018523	TNRC6A	95	100.000	Papio_anubis
ENSVVUG00000005380	TNRC6A	93	75.862	ENSPKIG00000012859	tnrc6a	99	75.862	Paramormyrops_kingsleyae
ENSVVUG00000005380	TNRC6A	83	75.670	ENSPSIG00000003965	TNRC6A	100	78.243	Pelodiscus_sinensis
ENSVVUG00000005380	TNRC6A	99	93.819	ENSPEMG00000016318	Tnrc6a	93	100.000	Peromyscus_maniculatus_bairdii
ENSVVUG00000005380	TNRC6A	99	84.324	ENSPCIG00000012106	TNRC6A	95	93.514	Phascolarctos_cinereus
ENSVVUG00000005380	TNRC6A	100	96.025	ENSPPYG00000007202	TNRC6A	99	96.025	Pongo_abelii
ENSVVUG00000005380	TNRC6A	95	100.000	ENSPCAG00000008260	TNRC6A	93	100.000	Procavia_capensis
ENSVVUG00000005380	TNRC6A	100	94.364	ENSPCOG00000010134	TNRC6A	99	94.364	Propithecus_coquereli
ENSVVUG00000005380	TNRC6A	96	71.488	ENSPVAG00000012066	TNRC6A	99	71.354	Pteropus_vampyrus
ENSVVUG00000005380	TNRC6A	99	92.947	ENSRNOG00000024737	Tnrc6a	93	100.000	Rattus_norvegicus
ENSVVUG00000005380	TNRC6A	100	96.739	ENSRBIG00000014222	TNRC6A	100	96.739	Rhinopithecus_bieti
ENSVVUG00000005380	TNRC6A	100	96.739	ENSRROG00000032360	TNRC6A	99	96.756	Rhinopithecus_roxellana
ENSVVUG00000005380	TNRC6A	99	95.711	ENSSBOG00000036197	TNRC6A	100	97.250	Saimiri_boliviensis_boliviensis
ENSVVUG00000005380	TNRC6A	91	93.514	ENSSHAG00000008811	TNRC6A	93	93.514	Sarcophilus_harrisii
ENSVVUG00000005380	TNRC6A	93	67.665	ENSSFOG00015008920	tnrc6a	95	79.459	Scleropages_formosus
ENSVVUG00000005380	TNRC6A	79	83.877	ENSSARG00000002479	TNRC6A	89	84.239	Sorex_araneus
ENSVVUG00000005380	TNRC6A	96	79.059	ENSSPUG00000010525	TNRC6A	100	79.549	Sphenodon_punctatus
ENSVVUG00000005380	TNRC6A	99	96.367	ENSSSCG00000038870	TNRC6A	100	97.775	Sus_scrofa
ENSVVUG00000005380	TNRC6A	97	80.214	ENSTGUG00000006142	TNRC6A	93	92.973	Taeniopygia_guttata
ENSVVUG00000005380	TNRC6A	99	93.783	ENSTBEG00000014965	TNRC6A	95	100.000	Tupaia_belangeri
ENSVVUG00000005380	TNRC6A	93	98.166	ENSTTRG00000002008	TNRC6A	90	98.166	Tursiops_truncatus
ENSVVUG00000005380	TNRC6A	89	94.409	ENSUAMG00000006656	-	93	97.605	Ursus_americanus
ENSVVUG00000005380	TNRC6A	99	98.267	ENSUMAG00000008274	TNRC6A	100	99.036	Ursus_maritimus
ENSVVUG00000005380	TNRC6A	51	93.567	ENSVPAG00000010764	-	57	85.990	Vicugna_pacos
ENSVVUG00000005380	TNRC6A	97	65.980	ENSXETG00000030437	TNRC6A	95	85.000	Xenopus_tropicalis