EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000005387 (Gene tree)
Gene ID: -
Gene Symbol: YTHDC1
Alias: KIAA1966|YT521|YT521-B
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 41828 bases
Position: chrNBDQ01000047.1:1650805-1692632
Accession: 112923694
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000007102	YTH	PF04146.15	3.4e-40	1	1
ENSVVUP00000007072	YTH	PF04146.15	3.8e-40	1	1
ENSVVUP00000007050	YTH	PF04146.15	4.5e-37	1	1
ENSVVUP00000007066	YTH	PF04146.15	4.9e-37	1	1
ENSVVUP00000007084	YTH	PF04146.15	5e-37	1	1
ENSVVUP00000007053	YTH	PF04146.15	5e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000009337	YTHDC1-201	3455	-	ENSVVUP00000007050	714 (aa)	-	-
ENSVVUT00000009371	YTHDC1-205	3376	-	ENSVVUP00000007084	761 (aa)	-	-
ENSVVUT00000009353	YTHDC1-203	3581	-	ENSVVUP00000007066	751 (aa)	-	-
ENSVVUT00000009340	YTHDC1-202	3635	-	ENSVVUP00000007053	769 (aa)	-	-
ENSVVUT00000009359	YTHDC1-204	3554	-	ENSVVUP00000007072	742 (aa)	XP_025859314	UPI000DF6965D
ENSVVUT00000009390	YTHDC1-206	2845	XM_026003531	ENSVVUP00000007102	679 (aa)	XP_025859316	-

Gene Model

Click here to download ENSVVUG00000005387's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000005387's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000005387	YTHDC1	100	97.206	ENSG00000083896	YTHDC1	99	97.397	Homo_sapiens
ENSVVUG00000005387	YTHDC1	61	60.241	ENSAPOG00000013997	ythdc1	57	63.221	Acanthochromis_polyacanthus
ENSVVUG00000005387	YTHDC1	100	99.705	ENSAMEG00000005688	YTHDC1	99	98.628	Ailuropoda_melanoleuca
ENSVVUG00000005387	YTHDC1	80	53.543	ENSACIG00000019728	ythdc1	78	59.155	Amphilophus_citrinellus
ENSVVUG00000005387	YTHDC1	61	61.927	ENSAOCG00000000239	ythdc1	59	66.970	Amphiprion_ocellaris
ENSVVUG00000005387	YTHDC1	53	66.391	ENSAPEG00000000618	ythdc1	53	68.280	Amphiprion_percula
ENSVVUG00000005387	YTHDC1	92	84.505	ENSAPLG00000009921	YTHDC1	60	96.897	Anas_platyrhynchos
ENSVVUG00000005387	YTHDC1	92	83.706	ENSACAG00000009697	YTHDC1	91	82.544	Anolis_carolinensis
ENSVVUG00000005387	YTHDC1	100	97.353	ENSANAG00000001522	YTHDC1	99	97.397	Aotus_nancymaae
ENSVVUG00000005387	YTHDC1	61	60.092	ENSACLG00000019371	ythdc1	59	66.133	Astatotilapia_calliptera
ENSVVUG00000005387	YTHDC1	94	61.821	ENSAMXG00000006978	ythdc1	91	64.935	Astyanax_mexicanus
ENSVVUG00000005387	YTHDC1	100	97.644	ENSBTAG00000015572	YTHDC1	99	96.708	Bos_taurus
ENSVVUG00000005387	YTHDC1	100	97.647	ENSCJAG00000009934	YTHDC1	99	96.712	Callithrix_jacchus
ENSVVUG00000005387	YTHDC1	100	99.853	ENSCAFG00000002821	YTHDC1	99	98.765	Canis_familiaris
ENSVVUG00000005387	YTHDC1	100	99.853	ENSCAFG00020027112	YTHDC1	99	98.765	Canis_lupus_dingo
ENSVVUG00000005387	YTHDC1	98	91.233	ENSCHIG00000004810	YTHDC1	98	91.233	Capra_hircus
ENSVVUG00000005387	YTHDC1	100	97.500	ENSTSYG00000011668	YTHDC1	99	96.575	Carlito_syrichta
ENSVVUG00000005387	YTHDC1	81	78.108	ENSCAPG00000008722	YTHDC1	90	67.665	Cavia_aperea
ENSVVUG00000005387	YTHDC1	100	89.412	ENSCPOG00000010929	YTHDC1	99	89.178	Cavia_porcellus
ENSVVUG00000005387	YTHDC1	100	97.353	ENSCCAG00000035754	YTHDC1	99	96.438	Cebus_capucinus
ENSVVUG00000005387	YTHDC1	100	96.366	ENSCATG00000036320	YTHDC1	99	97.671	Cercocebus_atys
ENSVVUG00000005387	YTHDC1	98	96.433	ENSCLAG00000005482	YTHDC1	99	96.433	Chinchilla_lanigera
ENSVVUG00000005387	YTHDC1	100	97.353	ENSCSAG00000005252	YTHDC1	99	96.438	Chlorocebus_sabaeus
ENSVVUG00000005387	YTHDC1	92	86.741	ENSCPBG00000021965	YTHDC1	94	85.888	Chrysemys_picta_bellii
ENSVVUG00000005387	YTHDC1	100	97.500	ENSCANG00000004769	YTHDC1	99	97.534	Colobus_angolensis_palliatus
ENSVVUG00000005387	YTHDC1	98	95.890	ENSCGRG00001000816	Ythdc1	99	95.890	Cricetulus_griseus_chok1gshd
ENSVVUG00000005387	YTHDC1	100	95.735	ENSCGRG00000009807	Ythdc1	99	94.665	Cricetulus_griseus_crigri
ENSVVUG00000005387	YTHDC1	61	60.793	ENSCSEG00000020404	ythdc1	59	65.982	Cynoglossus_semilaevis
ENSVVUG00000005387	YTHDC1	61	60.089	ENSCVAG00000022349	ythdc1	59	66.055	Cyprinodon_variegatus
ENSVVUG00000005387	YTHDC1	95	60.825	ENSDARG00000051953	ythdc1	58	78.588	Danio_rerio
ENSVVUG00000005387	YTHDC1	100	95.742	ENSDNOG00000004949	YTHDC1	99	94.938	Dasypus_novemcinctus
ENSVVUG00000005387	YTHDC1	100	97.054	ENSDORG00000013045	Ythdc1	99	97.115	Dipodomys_ordii
ENSVVUG00000005387	YTHDC1	76	100.000	ENSETEG00000001878	YTHDC1	77	100.000	Echinops_telfairi
ENSVVUG00000005387	YTHDC1	100	99.411	ENSEASG00005018383	YTHDC1	100	99.411	Equus_asinus_asinus
ENSVVUG00000005387	YTHDC1	100	99.116	ENSECAG00000018303	YTHDC1	100	99.116	Equus_caballus
ENSVVUG00000005387	YTHDC1	100	96.318	ENSEEUG00000015466	YTHDC1	99	95.336	Erinaceus_europaeus
ENSVVUG00000005387	YTHDC1	95	59.084	ENSELUG00000014029	ythdc1	57	76.716	Esox_lucius
ENSVVUG00000005387	YTHDC1	100	99.411	ENSFCAG00000026791	YTHDC1	99	98.354	Felis_catus
ENSVVUG00000005387	YTHDC1	67	88.063	ENSFALG00000006581	YTHDC1	85	95.500	Ficedula_albicollis
ENSVVUG00000005387	YTHDC1	100	96.324	ENSFDAG00000018560	YTHDC1	100	95.473	Fukomys_damarensis
ENSVVUG00000005387	YTHDC1	64	65.455	ENSFHEG00000001286	ythdc1	60	54.412	Fundulus_heteroclitus
ENSVVUG00000005387	YTHDC1	56	78.571	ENSGMOG00000018815	ythdc1	78	62.989	Gadus_morhua
ENSVVUG00000005387	YTHDC1	92	85.942	ENSGALG00000035906	YTHDC1	80	84.824	Gallus_gallus
ENSVVUG00000005387	YTHDC1	61	58.754	ENSGAFG00000001759	ythdc1	53	67.138	Gambusia_affinis
ENSVVUG00000005387	YTHDC1	61	63.084	ENSGACG00000015486	ythdc1	57	62.500	Gasterosteus_aculeatus
ENSVVUG00000005387	YTHDC1	91	86.963	ENSGAGG00000007108	YTHDC1	91	86.963	Gopherus_agassizii
ENSVVUG00000005387	YTHDC1	100	96.221	ENSGGOG00000021958	YTHDC1	99	97.534	Gorilla_gorilla
ENSVVUG00000005387	YTHDC1	61	60.092	ENSHBUG00000019288	ythdc1	59	66.133	Haplochromis_burtoni
ENSVVUG00000005387	YTHDC1	100	94.913	ENSHGLG00000006319	-	99	96.301	Heterocephalus_glaber_female
ENSVVUG00000005387	YTHDC1	95	68.380	ENSHGLG00000003239	-	57	77.751	Heterocephalus_glaber_female
ENSVVUG00000005387	YTHDC1	100	95.029	ENSHGLG00100001556	-	100	95.616	Heterocephalus_glaber_male
ENSVVUG00000005387	YTHDC1	95	66.949	ENSHGLG00100008060	-	57	75.297	Heterocephalus_glaber_male
ENSVVUG00000005387	YTHDC1	54	68.421	ENSHCOG00000001520	ythdc1	82	68.421	Hippocampus_comes
ENSVVUG00000005387	YTHDC1	92	66.928	ENSIPUG00000018136	ythdc1	61	84.223	Ictalurus_punctatus
ENSVVUG00000005387	YTHDC1	100	96.221	ENSSTOG00000013652	YTHDC1	99	97.534	Ictidomys_tridecemlineatus
ENSVVUG00000005387	YTHDC1	91	91.111	ENSJJAG00000010268	Ythdc1	93	91.556	Jaculus_jaculus
ENSVVUG00000005387	YTHDC1	61	60.959	ENSKMAG00000006483	ythdc1	85	65.525	Kryptolebias_marmoratus
ENSVVUG00000005387	YTHDC1	63	61.538	ENSLBEG00000020831	ythdc1	72	74.286	Labrus_bergylta
ENSVVUG00000005387	YTHDC1	92	74.881	ENSLACG00000004893	YTHDC1	92	74.154	Latimeria_chalumnae
ENSVVUG00000005387	YTHDC1	92	72.249	ENSLOCG00000003045	ythdc1	91	87.500	Lepisosteus_oculatus
ENSVVUG00000005387	YTHDC1	100	94.913	ENSLAFG00000021592	YTHDC1	100	99.160	Loxodonta_africana
ENSVVUG00000005387	YTHDC1	100	96.366	ENSMFAG00000031927	YTHDC1	99	97.671	Macaca_fascicularis
ENSVVUG00000005387	YTHDC1	100	97.500	ENSMMUG00000002265	YTHDC1	99	97.668	Macaca_mulatta
ENSVVUG00000005387	YTHDC1	100	97.500	ENSMNEG00000033751	YTHDC1	99	97.534	Macaca_nemestrina
ENSVVUG00000005387	YTHDC1	100	97.500	ENSMLEG00000042147	YTHDC1	99	97.534	Mandrillus_leucophaeus
ENSVVUG00000005387	YTHDC1	51	66.938	ENSMAMG00000013122	ythdc1	58	66.136	Mastacembelus_armatus
ENSVVUG00000005387	YTHDC1	61	60.092	ENSMZEG00005023173	ythdc1	59	66.133	Maylandia_zebra
ENSVVUG00000005387	YTHDC1	92	83.866	ENSMGAG00000010391	YTHDC1	85	85.463	Meleagris_gallopavo
ENSVVUG00000005387	YTHDC1	100	92.794	ENSMAUG00000001286	Ythdc1	99	92.206	Mesocricetus_auratus
ENSVVUG00000005387	YTHDC1	100	97.500	ENSMICG00000034640	YTHDC1	99	97.671	Microcebus_murinus
ENSVVUG00000005387	YTHDC1	98	95.890	ENSMOCG00000020201	Ythdc1	99	95.890	Microtus_ochrogaster
ENSVVUG00000005387	YTHDC1	50	61.176	ENSMODG00000004117	-	92	63.259	Monodelphis_domestica
ENSVVUG00000005387	YTHDC1	92	87.680	ENSMODG00000020754	-	91	87.556	Monodelphis_domestica
ENSVVUG00000005387	YTHDC1	85	69.932	ENSMODG00000014337	-	93	69.554	Monodelphis_domestica
ENSVVUG00000005387	YTHDC1	96	51.455	ENSMODG00000010076	-	60	62.260	Monodelphis_domestica
ENSVVUG00000005387	YTHDC1	69	58.511	ENSMODG00000009173	-	88	62.319	Monodelphis_domestica
ENSVVUG00000005387	YTHDC1	61	68.000	ENSMALG00000013412	ythdc1	56	68.194	Monopterus_albus
ENSVVUG00000005387	YTHDC1	92	93.440	MGP_CAROLIEiJ_G0027347	Ythdc1	94	93.195	Mus_caroli
ENSVVUG00000005387	YTHDC1	92	93.280	ENSMUSG00000035851	Ythdc1	91	92.889	Mus_musculus
ENSVVUG00000005387	YTHDC1	92	93.600	MGP_PahariEiJ_G0017126	Ythdc1	91	93.185	Mus_pahari
ENSVVUG00000005387	YTHDC1	92	93.600	MGP_SPRETEiJ_G0028339	Ythdc1	91	93.185	Mus_spretus
ENSVVUG00000005387	YTHDC1	94	70.015	ENSMPUG00000001743	YTHDC1	53	99.739	Mustela_putorius_furo
ENSVVUG00000005387	YTHDC1	100	98.085	ENSMLUG00000016300	YTHDC1	100	97.115	Myotis_lucifugus
ENSVVUG00000005387	YTHDC1	66	83.369	ENSNGAG00000024000	Ythdc1	93	88.235	Nannospalax_galili
ENSVVUG00000005387	YTHDC1	59	63.303	ENSNBRG00000007663	ythdc1	70	66.355	Neolamprologus_brichardi
ENSVVUG00000005387	YTHDC1	100	95.779	ENSNLEG00000009202	YTHDC1	99	96.982	Nomascus_leucogenys
ENSVVUG00000005387	YTHDC1	80	79.805	ENSMEUG00000007128	YTHDC1	81	79.805	Notamacropus_eugenii
ENSVVUG00000005387	YTHDC1	72	98.017	ENSOPRG00000008986	YTHDC1	74	95.845	Ochotona_princeps
ENSVVUG00000005387	YTHDC1	100	95.434	ENSODEG00000001715	YTHDC1	99	95.492	Octodon_degus
ENSVVUG00000005387	YTHDC1	67	74.286	ENSONIG00000012651	ythdc1	64	67.898	Oreochromis_niloticus
ENSVVUG00000005387	YTHDC1	92	77.008	ENSOANG00000014398	YTHDC1	55	97.468	Ornithorhynchus_anatinus
ENSVVUG00000005387	YTHDC1	92	80.573	ENSOCUG00000015886	YTHDC1	56	95.960	Oryctolagus_cuniculus
ENSVVUG00000005387	YTHDC1	51	68.478	ENSORLG00000030544	ythdc1	61	68.856	Oryzias_latipes
ENSVVUG00000005387	YTHDC1	51	67.663	ENSORLG00020019316	ythdc1	61	68.856	Oryzias_latipes_hni
ENSVVUG00000005387	YTHDC1	61	61.149	ENSOMEG00000000551	ythdc1	61	64.679	Oryzias_melastigma
ENSVVUG00000005387	YTHDC1	100	96.912	ENSOGAG00000003362	YTHDC1	99	96.027	Otolemur_garnettii
ENSVVUG00000005387	YTHDC1	100	97.644	ENSOARG00000008633	YTHDC1	99	96.708	Ovis_aries
ENSVVUG00000005387	YTHDC1	100	96.076	ENSPPAG00000041315	YTHDC1	99	97.397	Pan_paniscus
ENSVVUG00000005387	YTHDC1	100	98.399	ENSPPRG00000011979	YTHDC1	99	99.588	Panthera_pardus
ENSVVUG00000005387	YTHDC1	100	98.108	ENSPTIG00000015527	YTHDC1	100	99.313	Panthera_tigris_altaica
ENSVVUG00000005387	YTHDC1	100	96.076	ENSPTRG00000016105	YTHDC1	99	97.397	Pan_troglodytes
ENSVVUG00000005387	YTHDC1	100	96.366	ENSPANG00000021590	YTHDC1	99	97.671	Papio_anubis
ENSVVUG00000005387	YTHDC1	78	83.527	ENSPKIG00000018497	ythdc1	91	68.551	Paramormyrops_kingsleyae
ENSVVUG00000005387	YTHDC1	92	86.262	ENSPSIG00000002782	YTHDC1	92	85.503	Pelodiscus_sinensis
ENSVVUG00000005387	YTHDC1	53	58.696	ENSPMGG00000000970	-	71	62.500	Periophthalmus_magnuspinnatus
ENSVVUG00000005387	YTHDC1	100	96.029	ENSPEMG00000013850	Ythdc1	100	95.062	Peromyscus_maniculatus_bairdii
ENSVVUG00000005387	YTHDC1	92	86.720	ENSPCIG00000006870	YTHDC1	91	87.407	Phascolarctos_cinereus
ENSVVUG00000005387	YTHDC1	61	60.000	ENSPFOG00000013404	ythdc1	60	64.989	Poecilia_formosa
ENSVVUG00000005387	YTHDC1	65	58.887	ENSPLAG00000011079	ythdc1	85	64.531	Poecilia_latipinna
ENSVVUG00000005387	YTHDC1	61	60.000	ENSPMEG00000009238	ythdc1	60	64.989	Poecilia_mexicana
ENSVVUG00000005387	YTHDC1	76	58.824	ENSPREG00000016973	ythdc1	59	58.654	Poecilia_reticulata
ENSVVUG00000005387	YTHDC1	93	97.480	ENSPPYG00000014726	YTHDC1	100	97.480	Pongo_abelii
ENSVVUG00000005387	YTHDC1	76	88.955	ENSPCAG00000009607	YTHDC1	75	88.182	Procavia_capensis
ENSVVUG00000005387	YTHDC1	100	91.860	ENSPCOG00000019105	YTHDC1	99	93.425	Propithecus_coquereli
ENSVVUG00000005387	YTHDC1	98	95.205	ENSPVAG00000015551	YTHDC1	99	95.205	Pteropus_vampyrus
ENSVVUG00000005387	YTHDC1	61	60.092	ENSPNYG00000011687	ythdc1	59	66.133	Pundamilia_nyererei
ENSVVUG00000005387	YTHDC1	92	68.750	ENSPNAG00000028365	ythdc1	91	68.543	Pygocentrus_nattereri
ENSVVUG00000005387	YTHDC1	94	89.898	ENSRNOG00000001996	Ythdc1	91	93.195	Rattus_norvegicus
ENSVVUG00000005387	YTHDC1	100	95.930	ENSRBIG00000028279	YTHDC1	99	96.438	Rhinopithecus_bieti
ENSVVUG00000005387	YTHDC1	100	97.500	ENSRROG00000035028	YTHDC1	99	97.534	Rhinopithecus_roxellana
ENSVVUG00000005387	YTHDC1	100	96.512	ENSSBOG00000022353	YTHDC1	99	97.808	Saimiri_boliviensis_boliviensis
ENSVVUG00000005387	YTHDC1	92	87.680	ENSSHAG00000002538	YTHDC1	91	88.138	Sarcophilus_harrisii
ENSVVUG00000005387	YTHDC1	94	66.176	ENSSFOG00015003298	ythdc1	60	86.493	Scleropages_formosus
ENSVVUG00000005387	YTHDC1	61	60.762	ENSSMAG00000009086	ythdc1	60	65.747	Scophthalmus_maximus
ENSVVUG00000005387	YTHDC1	51	67.391	ENSSDUG00000022008	ythdc1	59	67.048	Seriola_dumerili
ENSVVUG00000005387	YTHDC1	51	67.391	ENSSLDG00000007926	ythdc1	59	67.048	Seriola_lalandi_dorsalis
ENSVVUG00000005387	YTHDC1	85	99.307	ENSSARG00000010960	YTHDC1	100	99.307	Sorex_araneus
ENSVVUG00000005387	YTHDC1	92	82.830	ENSSPUG00000009357	YTHDC1	91	79.887	Sphenodon_punctatus
ENSVVUG00000005387	YTHDC1	61	62.844	ENSSPAG00000011449	ythdc1	59	67.661	Stegastes_partitus
ENSVVUG00000005387	YTHDC1	100	98.091	ENSSSCG00000035505	YTHDC1	100	98.113	Sus_scrofa
ENSVVUG00000005387	YTHDC1	92	86.102	ENSTGUG00000004452	-	91	84.024	Taeniopygia_guttata
ENSVVUG00000005387	YTHDC1	91	47.546	ENSTRUG00000010142	ythdc1	69	70.000	Takifugu_rubripes
ENSVVUG00000005387	YTHDC1	86	59.701	ENSTNIG00000013243	ythdc1	88	64.840	Tetraodon_nigroviridis
ENSVVUG00000005387	YTHDC1	92	86.880	ENSTBEG00000011546	YTHDC1	91	86.438	Tupaia_belangeri
ENSVVUG00000005387	YTHDC1	100	97.791	ENSTTRG00000005083	YTHDC1	99	96.845	Tursiops_truncatus
ENSVVUG00000005387	YTHDC1	100	99.558	ENSUAMG00000010388	YTHDC1	100	99.558	Ursus_americanus
ENSVVUG00000005387	YTHDC1	100	83.800	ENSUMAG00000013668	YTHDC1	98	83.676	Ursus_maritimus
ENSVVUG00000005387	YTHDC1	100	94.845	ENSVPAG00000009040	YTHDC1	99	94.102	Vicugna_pacos
ENSVVUG00000005387	YTHDC1	92	71.746	ENSXETG00000017960	ythdc1	91	70.545	Xenopus_tropicalis
ENSVVUG00000005387	YTHDC1	54	47.492	ENSXCOG00000000530	ythdc1	79	52.308	Xiphophorus_couchianus
ENSVVUG00000005387	YTHDC1	61	59.202	ENSXMAG00000005196	ythdc1	61	64.908	Xiphophorus_maculatus