EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000005389 (Gene tree)
Gene ID: -
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 219836 bases
Position: chrNBDQ01000011.1:12192217-12412052
Accession: 112915216
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000007106	S1	PF00575.23	2.8e-09	1	1
ENSVVUP00000007064	S1	PF00575.23	3.1e-09	1	1
ENSVVUP00000007092	S1	PF00575.23	3.2e-09	1	1
ENSVVUP00000007054	S1	PF00575.23	3.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000009394	SRBD1-205	3490	-	ENSVVUP00000007106	933 (aa)	-	-
ENSVVUT00000009351	SRBD1-202	3837	-	ENSVVUP00000007064	988 (aa)	XP_025848369	UPI000DF70009
ENSVVUT00000009380	SRBD1-204	3009	-	ENSVVUP00000007092	1002 (aa)	-	-
ENSVVUT00000009360	SRBD1-203	3533	-	ENSVVUP00000007073	904 (aa)	-	-
ENSVVUT00000009341	SRBD1-201	3182	-	ENSVVUP00000007054	1005 (aa)	XP_025848368	UPI000DF6B83F

Gene Model

Click here to download ENSVVUG00000005389's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000005389's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000005389	SRBD1	100	90.060	ENSG00000068784	SRBD1	100	89.458	Homo_sapiens
ENSVVUG00000005389	SRBD1	100	51.754	ENSAPOG00000005103	si:ch211-117n7.8	93	53.527	Acanthochromis_polyacanthus
ENSVVUG00000005389	SRBD1	100	96.158	ENSAMEG00000005993	SRBD1	100	96.158	Ailuropoda_melanoleuca
ENSVVUG00000005389	SRBD1	89	55.580	ENSACIG00000009875	si:ch211-117n7.8	90	55.850	Amphilophus_citrinellus
ENSVVUG00000005389	SRBD1	99	52.114	ENSAOCG00000024718	si:ch211-117n7.8	99	52.157	Amphiprion_ocellaris
ENSVVUG00000005389	SRBD1	97	53.135	ENSAPEG00000002645	si:ch211-117n7.8	99	53.135	Amphiprion_percula
ENSVVUG00000005389	SRBD1	99	51.855	ENSATEG00000010844	si:ch211-117n7.8	97	52.781	Anabas_testudineus
ENSVVUG00000005389	SRBD1	100	71.344	ENSAPLG00000006313	SRBD1	100	71.217	Anas_platyrhynchos
ENSVVUG00000005389	SRBD1	100	89.960	ENSANAG00000025573	SRBD1	100	89.357	Aotus_nancymaae
ENSVVUG00000005389	SRBD1	99	49.070	ENSACLG00000024219	si:ch211-117n7.8	94	52.984	Astatotilapia_calliptera
ENSVVUG00000005389	SRBD1	86	60.393	ENSAMXG00000004294	SRBD1	93	56.751	Astyanax_mexicanus
ENSVVUG00000005389	SRBD1	100	91.064	ENSBTAG00000007508	SRBD1	99	91.064	Bos_taurus
ENSVVUG00000005389	SRBD1	58	32.049	WBGene00022830	ZK973.1	91	30.295	Caenorhabditis_elegans
ENSVVUG00000005389	SRBD1	100	89.458	ENSCJAG00000000727	SRBD1	100	89.056	Callithrix_jacchus
ENSVVUG00000005389	SRBD1	100	99.091	ENSCAFG00000002554	SRBD1	100	99.091	Canis_familiaris
ENSVVUG00000005389	SRBD1	100	100.000	ENSCAFG00020026284	SRBD1	99	96.842	Canis_lupus_dingo
ENSVVUG00000005389	SRBD1	100	91.357	ENSCHIG00000016535	SRBD1	100	91.008	Capra_hircus
ENSVVUG00000005389	SRBD1	100	91.283	ENSTSYG00000012797	SRBD1	100	90.782	Carlito_syrichta
ENSVVUG00000005389	SRBD1	100	89.728	ENSCPOG00000004773	SRBD1	100	89.124	Cavia_porcellus
ENSVVUG00000005389	SRBD1	100	90.562	ENSCCAG00000025589	SRBD1	100	89.960	Cebus_capucinus
ENSVVUG00000005389	SRBD1	100	90.863	ENSCATG00000039530	SRBD1	100	90.261	Cercocebus_atys
ENSVVUG00000005389	SRBD1	99	92.405	ENSCLAG00000008623	SRBD1	100	90.060	Chinchilla_lanigera
ENSVVUG00000005389	SRBD1	100	91.064	ENSCSAG00000013350	SRBD1	100	90.462	Chlorocebus_sabaeus
ENSVVUG00000005389	SRBD1	92	94.118	ENSCHOG00000003805	SRBD1	87	94.118	Choloepus_hoffmanni
ENSVVUG00000005389	SRBD1	99	79.747	ENSCPBG00000005677	SRBD1	100	74.773	Chrysemys_picta_bellii
ENSVVUG00000005389	SRBD1	79	42.478	ENSCING00000005950	-	99	42.478	Ciona_intestinalis
ENSVVUG00000005389	SRBD1	80	42.893	ENSCSAVG00000000861	-	99	43.369	Ciona_savignyi
ENSVVUG00000005389	SRBD1	99	90.845	ENSCANG00000016307	SRBD1	99	90.241	Colobus_angolensis_palliatus
ENSVVUG00000005389	SRBD1	100	85.643	ENSCGRG00001000513	Srbd1	100	85.141	Cricetulus_griseus_chok1gshd
ENSVVUG00000005389	SRBD1	100	85.643	ENSCGRG00000002283	Srbd1	100	85.141	Cricetulus_griseus_crigri
ENSVVUG00000005389	SRBD1	100	50.737	ENSCSEG00000000856	si:ch211-117n7.8	88	55.618	Cynoglossus_semilaevis
ENSVVUG00000005389	SRBD1	84	57.462	ENSCVAG00000020212	si:ch211-117n7.8	97	54.555	Cyprinodon_variegatus
ENSVVUG00000005389	SRBD1	99	93.671	ENSDNOG00000018686	SRBD1	100	90.390	Dasypus_novemcinctus
ENSVVUG00000005389	SRBD1	100	87.437	ENSDORG00000010468	Srbd1	100	87.437	Dipodomys_ordii
ENSVVUG00000005389	SRBD1	94	34.438	FBgn0051156	CG31156	98	35.257	Drosophila_melanogaster
ENSVVUG00000005389	SRBD1	89	82.888	ENSETEG00000000739	SRBD1	91	82.888	Echinops_telfairi
ENSVVUG00000005389	SRBD1	73	47.826	ENSEBUG00000008902	si:ch211-117n7.8	96	47.826	Eptatretus_burgeri
ENSVVUG00000005389	SRBD1	100	89.759	ENSEASG00005003132	SRBD1	97	94.904	Equus_asinus_asinus
ENSVVUG00000005389	SRBD1	100	93.373	ENSECAG00000013865	SRBD1	100	92.695	Equus_caballus
ENSVVUG00000005389	SRBD1	97	55.454	ENSELUG00000012592	si:ch211-117n7.8	91	55.657	Esox_lucius
ENSVVUG00000005389	SRBD1	99	98.101	ENSFCAG00000005101	SRBD1	100	94.779	Felis_catus
ENSVVUG00000005389	SRBD1	100	69.596	ENSFALG00000012966	SRBD1	100	69.394	Ficedula_albicollis
ENSVVUG00000005389	SRBD1	98	88.296	ENSFDAG00000016670	SRBD1	98	88.577	Fukomys_damarensis
ENSVVUG00000005389	SRBD1	96	53.080	ENSFHEG00000019480	si:ch211-117n7.8	92	53.080	Fundulus_heteroclitus
ENSVVUG00000005389	SRBD1	51	51.910	ENSGMOG00000018010	-	100	51.910	Gadus_morhua
ENSVVUG00000005389	SRBD1	99	76.582	ENSGALG00000009990	SRBD1	100	71.100	Gallus_gallus
ENSVVUG00000005389	SRBD1	100	50.441	ENSGAFG00000019664	si:ch211-117n7.8	97	51.619	Gambusia_affinis
ENSVVUG00000005389	SRBD1	60	68.408	ENSGACG00000010794	si:ch211-117n7.8	100	61.342	Gasterosteus_aculeatus
ENSVVUG00000005389	SRBD1	83	84.416	ENSGAGG00000006166	SRBD1	99	81.437	Gopherus_agassizii
ENSVVUG00000005389	SRBD1	97	90.619	ENSGGOG00000005910	SRBD1	99	90.654	Gorilla_gorilla
ENSVVUG00000005389	SRBD1	85	50.711	ENSHBUG00000013207	si:ch211-117n7.8	86	50.829	Haplochromis_burtoni
ENSVVUG00000005389	SRBD1	99	89.437	ENSHGLG00000018153	-	99	88.833	Heterocephalus_glaber_female
ENSVVUG00000005389	SRBD1	99	89.336	ENSHGLG00100015183	-	99	88.732	Heterocephalus_glaber_male
ENSVVUG00000005389	SRBD1	90	58.797	ENSIPUG00000009661	srbd1	94	56.535	Ictalurus_punctatus
ENSVVUG00000005389	SRBD1	100	90.964	ENSSTOG00000005898	SRBD1	100	90.361	Ictidomys_tridecemlineatus
ENSVVUG00000005389	SRBD1	100	80.762	ENSJJAG00000022244	Srbd1	100	80.261	Jaculus_jaculus
ENSVVUG00000005389	SRBD1	99	51.359	ENSKMAG00000003473	si:ch211-117n7.8	99	51.068	Kryptolebias_marmoratus
ENSVVUG00000005389	SRBD1	98	52.358	ENSLBEG00000027518	si:ch211-117n7.8	97	52.376	Labrus_bergylta
ENSVVUG00000005389	SRBD1	86	71.192	ENSLACG00000009790	SRBD1	100	71.192	Latimeria_chalumnae
ENSVVUG00000005389	SRBD1	100	56.988	ENSLOCG00000016360	si:ch211-117n7.8	99	57.087	Lepisosteus_oculatus
ENSVVUG00000005389	SRBD1	100	91.165	ENSMFAG00000042026	SRBD1	100	90.562	Macaca_fascicularis
ENSVVUG00000005389	SRBD1	100	90.964	ENSMMUG00000003490	SRBD1	100	90.361	Macaca_mulatta
ENSVVUG00000005389	SRBD1	100	88.454	ENSMNEG00000034701	SRBD1	100	87.851	Macaca_nemestrina
ENSVVUG00000005389	SRBD1	100	90.763	ENSMLEG00000000745	SRBD1	100	90.161	Mandrillus_leucophaeus
ENSVVUG00000005389	SRBD1	83	56.475	ENSMAMG00000021921	si:ch211-117n7.8	97	49.482	Mastacembelus_armatus
ENSVVUG00000005389	SRBD1	100	50.918	ENSMZEG00005027369	si:ch211-117n7.8	94	52.984	Maylandia_zebra
ENSVVUG00000005389	SRBD1	79	77.893	ENSMGAG00000010273	SRBD1	100	75.469	Meleagris_gallopavo
ENSVVUG00000005389	SRBD1	82	84.223	ENSMAUG00000013916	Srbd1	99	84.223	Mesocricetus_auratus
ENSVVUG00000005389	SRBD1	99	94.937	ENSMICG00000007835	SRBD1	100	91.466	Microcebus_murinus
ENSVVUG00000005389	SRBD1	100	84.237	ENSMOCG00000018716	Srbd1	100	83.735	Microtus_ochrogaster
ENSVVUG00000005389	SRBD1	84	56.419	ENSMMOG00000007507	si:ch211-117n7.8	87	56.419	Mola_mola
ENSVVUG00000005389	SRBD1	99	50.386	ENSMALG00000001562	si:ch211-117n7.8	93	52.626	Monopterus_albus
ENSVVUG00000005389	SRBD1	100	82.028	MGP_CAROLIEiJ_G0021934	Srbd1	99	84.026	Mus_caroli
ENSVVUG00000005389	SRBD1	100	82.631	ENSMUSG00000024135	Srbd1	100	82.129	Mus_musculus
ENSVVUG00000005389	SRBD1	100	81.526	MGP_PahariEiJ_G0020924	Srbd1	100	81.426	Mus_pahari
ENSVVUG00000005389	SRBD1	100	82.932	MGP_SPRETEiJ_G0022850	Srbd1	100	82.430	Mus_spretus
ENSVVUG00000005389	SRBD1	100	88.755	ENSMLUG00000007039	SRBD1	100	88.153	Myotis_lucifugus
ENSVVUG00000005389	SRBD1	99	88.608	ENSNGAG00000011893	Srbd1	100	84.540	Nannospalax_galili
ENSVVUG00000005389	SRBD1	87	55.324	ENSNBRG00000012873	si:ch211-117n7.8	87	55.440	Neolamprologus_brichardi
ENSVVUG00000005389	SRBD1	100	90.261	ENSNLEG00000016877	SRBD1	100	89.659	Nomascus_leucogenys
ENSVVUG00000005389	SRBD1	100	86.405	ENSODEG00000012095	SRBD1	100	85.801	Octodon_degus
ENSVVUG00000005389	SRBD1	99	51.354	ENSONIG00000000945	si:ch211-117n7.8	100	60.484	Oreochromis_niloticus
ENSVVUG00000005389	SRBD1	99	94.937	ENSOCUG00000015385	SRBD1	100	91.466	Oryctolagus_cuniculus
ENSVVUG00000005389	SRBD1	98	49.112	ENSORLG00000004427	si:ch211-117n7.8	82	53.846	Oryzias_latipes
ENSVVUG00000005389	SRBD1	99	50.484	ENSORLG00020012792	si:ch211-117n7.8	81	57.278	Oryzias_latipes_hni
ENSVVUG00000005389	SRBD1	99	50.678	ENSORLG00015018598	si:ch211-117n7.8	84	56.372	Oryzias_latipes_hsok
ENSVVUG00000005389	SRBD1	96	51.646	ENSOMEG00000012229	si:ch211-117n7.8	93	52.004	Oryzias_melastigma
ENSVVUG00000005389	SRBD1	99	90.506	ENSOGAG00000001076	SRBD1	100	85.226	Otolemur_garnettii
ENSVVUG00000005389	SRBD1	99	89.881	ENSOARG00000005958	SRBD1	100	86.990	Ovis_aries
ENSVVUG00000005389	SRBD1	100	90.361	ENSPPAG00000038442	SRBD1	100	89.759	Pan_paniscus
ENSVVUG00000005389	SRBD1	100	95.281	ENSPPRG00000003449	SRBD1	100	94.679	Panthera_pardus
ENSVVUG00000005389	SRBD1	100	95.281	ENSPTIG00000012495	SRBD1	100	94.679	Panthera_tigris_altaica
ENSVVUG00000005389	SRBD1	100	90.361	ENSPTRG00000011889	SRBD1	100	89.759	Pan_troglodytes
ENSVVUG00000005389	SRBD1	100	90.763	ENSPANG00000008063	SRBD1	100	90.161	Papio_anubis
ENSVVUG00000005389	SRBD1	84	60.072	ENSPKIG00000021973	si:ch211-117n7.8	97	54.277	Paramormyrops_kingsleyae
ENSVVUG00000005389	SRBD1	100	73.488	ENSPSIG00000008992	SRBD1	100	73.992	Pelodiscus_sinensis
ENSVVUG00000005389	SRBD1	90	53.634	ENSPMGG00000013348	si:ch211-117n7.8	98	51.802	Periophthalmus_magnuspinnatus
ENSVVUG00000005389	SRBD1	100	83.415	ENSPEMG00000020684	Srbd1	100	82.924	Peromyscus_maniculatus_bairdii
ENSVVUG00000005389	SRBD1	96	53.981	ENSPFOG00000010650	si:ch211-117n7.8	93	53.981	Poecilia_formosa
ENSVVUG00000005389	SRBD1	100	50.923	ENSPLAG00000002141	si:ch211-117n7.8	93	52.059	Poecilia_latipinna
ENSVVUG00000005389	SRBD1	96	54.188	ENSPMEG00000018537	si:ch211-117n7.8	93	54.188	Poecilia_mexicana
ENSVVUG00000005389	SRBD1	85	57.110	ENSPREG00000003258	si:ch211-117n7.8	86	57.110	Poecilia_reticulata
ENSVVUG00000005389	SRBD1	99	94.304	ENSPPYG00000012444	SRBD1	93	94.304	Pongo_abelii
ENSVVUG00000005389	SRBD1	82	82.914	ENSPCAG00000005629	SRBD1	85	82.914	Procavia_capensis
ENSVVUG00000005389	SRBD1	100	79.100	ENSPCOG00000017669	SRBD1	100	78.500	Propithecus_coquereli
ENSVVUG00000005389	SRBD1	99	93.038	ENSPVAG00000001782	SRBD1	94	93.038	Pteropus_vampyrus
ENSVVUG00000005389	SRBD1	85	54.245	ENSPNYG00000000508	si:ch211-117n7.8	86	54.363	Pundamilia_nyererei
ENSVVUG00000005389	SRBD1	89	59.202	ENSPNAG00000013492	SRBD1	91	59.424	Pygocentrus_nattereri
ENSVVUG00000005389	SRBD1	100	80.723	ENSRNOG00000014720	Srbd1	99	81.727	Rattus_norvegicus
ENSVVUG00000005389	SRBD1	99	90.443	ENSRBIG00000033486	SRBD1	99	89.839	Rhinopithecus_bieti
ENSVVUG00000005389	SRBD1	99	90.443	ENSRROG00000041599	SRBD1	99	89.839	Rhinopithecus_roxellana
ENSVVUG00000005389	SRBD1	100	89.960	ENSSBOG00000024982	SRBD1	100	89.357	Saimiri_boliviensis_boliviensis
ENSVVUG00000005389	SRBD1	84	59.834	ENSSFOG00015001128	si:ch211-117n7.8	90	60.370	Scleropages_formosus
ENSVVUG00000005389	SRBD1	99	51.066	ENSSMAG00000018256	si:ch211-117n7.8	93	53.244	Scophthalmus_maximus
ENSVVUG00000005389	SRBD1	96	52.792	ENSSLDG00000023189	si:ch211-117n7.8	96	52.792	Seriola_lalandi_dorsalis
ENSVVUG00000005389	SRBD1	99	89.873	ENSSARG00000009740	SRBD1	94	89.873	Sorex_araneus
ENSVVUG00000005389	SRBD1	89	76.018	ENSSPUG00000010475	SRBD1	98	76.617	Sphenodon_punctatus
ENSVVUG00000005389	SRBD1	87	54.410	ENSSPAG00000008092	-	86	54.868	Stegastes_partitus
ENSVVUG00000005389	SRBD1	99	95.570	ENSSSCG00000008445	SRBD1	100	92.688	Sus_scrofa
ENSVVUG00000005389	SRBD1	83	81.729	ENSTGUG00000003878	SRBD1	100	77.497	Taeniopygia_guttata
ENSVVUG00000005389	SRBD1	99	50.674	ENSTRUG00000007080	si:ch211-117n7.8	98	54.978	Takifugu_rubripes
ENSVVUG00000005389	SRBD1	99	50.537	ENSTNIG00000007464	si:ch211-117n7.8	99	50.244	Tetraodon_nigroviridis
ENSVVUG00000005389	SRBD1	76	100.000	ENSTBEG00000004556	SRBD1	76	100.000	Tupaia_belangeri
ENSVVUG00000005389	SRBD1	93	95.570	ENSTTRG00000011871	SRBD1	94	93.088	Tursiops_truncatus
ENSVVUG00000005389	SRBD1	99	98.101	ENSUAMG00000008126	SRBD1	99	95.267	Ursus_americanus
ENSVVUG00000005389	SRBD1	99	98.101	ENSUMAG00000012902	SRBD1	100	95.726	Ursus_maritimus
ENSVVUG00000005389	SRBD1	90	96.203	ENSVPAG00000006825	SRBD1	100	92.511	Vicugna_pacos
ENSVVUG00000005389	SRBD1	100	52.839	ENSXETG00000002760	srbd1	100	52.408	Xenopus_tropicalis
ENSVVUG00000005389	SRBD1	98	51.443	ENSXMAG00000016861	si:ch211-117n7.8	93	53.679	Xiphophorus_maculatus