EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000005453 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 49416 bases
Position: chrNBDQ01000005.1:4534806-4584221
Accession: 112933217
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000007182	PRP4	PF08799.11	1.4e-13	1	1
ENSVVUP00000007168	PRP4	PF08799.11	1.5e-13	1	1
ENSVVUP00000007182	Prp18	PF02840.15	6.7e-63	1	1
ENSVVUP00000007168	Prp18	PF02840.15	8e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000009481	-	1056	-	ENSVVUP00000007168	351 (aa)	XP_025872109	UPI00005A0101
ENSVVUT00000009495	-	1029	-	ENSVVUP00000007182	342 (aa)	XP_025872118	UPI00004BD126

Gene Model

Click here to download ENSVVUG00000005453's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000005453's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000005453	-	100	99.415	ENSG00000165630	PRPF18	100	99.415	Homo_sapiens
ENSVVUG00000005453	-	100	85.088	ENSAPOG00000024177	prpf18	100	85.088	Acanthochromis_polyacanthus
ENSVVUG00000005453	-	100	100.000	ENSAMEG00000013591	-	100	100.000	Ailuropoda_melanoleuca
ENSVVUG00000005453	-	100	84.503	ENSACIG00000001186	prpf18	100	84.503	Amphilophus_citrinellus
ENSVVUG00000005453	-	98	85.075	ENSAOCG00000006572	prpf18	94	83.382	Amphiprion_ocellaris
ENSVVUG00000005453	-	100	85.380	ENSAPEG00000004564	prpf18	100	85.380	Amphiprion_percula
ENSVVUG00000005453	-	100	83.918	ENSATEG00000000303	prpf18	100	83.918	Anabas_testudineus
ENSVVUG00000005453	-	99	91.176	ENSAPLG00000003387	-	99	91.176	Anas_platyrhynchos
ENSVVUG00000005453	-	100	91.279	ENSACAG00000000818	-	100	91.279	Anolis_carolinensis
ENSVVUG00000005453	-	100	98.860	ENSANAG00000037445	-	100	98.860	Aotus_nancymaae
ENSVVUG00000005453	-	100	84.503	ENSACLG00000026296	prpf18	100	84.503	Astatotilapia_calliptera
ENSVVUG00000005453	-	100	83.761	ENSAMXG00000012848	prpf18	100	83.761	Astyanax_mexicanus
ENSVVUG00000005453	-	100	99.715	ENSBTAG00000017244	PRPF18	100	99.715	Bos_taurus
ENSVVUG00000005453	-	98	38.506	WBGene00009320	F32B6.3	97	38.506	Caenorhabditis_elegans
ENSVVUG00000005453	-	100	98.860	ENSCJAG00000009432	-	100	98.860	Callithrix_jacchus
ENSVVUG00000005453	-	100	100.000	ENSCAFG00000004735	-	100	100.000	Canis_familiaris
ENSVVUG00000005453	-	100	100.000	ENSCAFG00020007712	-	100	100.000	Canis_lupus_dingo
ENSVVUG00000005453	-	100	99.715	ENSCHIG00000000499	-	100	99.715	Capra_hircus
ENSVVUG00000005453	-	100	98.575	ENSTSYG00000003517	-	100	98.575	Carlito_syrichta
ENSVVUG00000005453	-	100	99.415	ENSCPOG00000021069	-	100	99.415	Cavia_porcellus
ENSVVUG00000005453	-	100	98.860	ENSCCAG00000036822	-	100	98.860	Cebus_capucinus
ENSVVUG00000005453	-	100	88.304	ENSCATG00000016633	-	100	88.304	Cercocebus_atys
ENSVVUG00000005453	-	100	99.123	ENSCLAG00000011770	-	100	99.123	Chinchilla_lanigera
ENSVVUG00000005453	-	100	99.430	ENSCSAG00000013109	-	100	99.430	Chlorocebus_sabaeus
ENSVVUG00000005453	-	100	88.764	ENSCPBG00000003100	-	100	89.326	Chrysemys_picta_bellii
ENSVVUG00000005453	-	99	54.412	ENSCING00000020481	-	97	54.412	Ciona_intestinalis
ENSVVUG00000005453	-	99	54.335	ENSCSAVG00000010546	-	99	54.360	Ciona_savignyi
ENSVVUG00000005453	-	100	99.145	ENSCANG00000034900	-	100	99.145	Colobus_angolensis_palliatus
ENSVVUG00000005453	-	100	98.830	ENSCGRG00001023665	Prpf18	100	98.830	Cricetulus_griseus_chok1gshd
ENSVVUG00000005453	-	100	98.830	ENSCGRG00000014690	Prpf18	100	98.830	Cricetulus_griseus_crigri
ENSVVUG00000005453	-	100	82.456	ENSCSEG00000005536	prpf18	99	82.456	Cynoglossus_semilaevis
ENSVVUG00000005453	-	100	83.918	ENSCVAG00000012401	prpf18	100	83.918	Cyprinodon_variegatus
ENSVVUG00000005453	-	100	84.503	ENSDARG00000058306	prpf18	100	84.503	Danio_rerio
ENSVVUG00000005453	-	100	98.830	ENSDNOG00000035607	-	100	98.830	Dasypus_novemcinctus
ENSVVUG00000005453	-	100	99.123	ENSDORG00000000858	Prpf18	100	99.123	Dipodomys_ordii
ENSVVUG00000005453	-	99	51.327	FBgn0027784	Prp18	98	51.032	Drosophila_melanogaster
ENSVVUG00000005453	-	100	87.135	ENSETEG00000015060	-	100	87.135	Echinops_telfairi
ENSVVUG00000005453	-	100	66.859	ENSEBUG00000016502	prpf18	99	65.994	Eptatretus_burgeri
ENSVVUG00000005453	-	100	99.715	ENSEASG00005019373	-	100	99.715	Equus_asinus_asinus
ENSVVUG00000005453	-	100	99.715	ENSECAG00000006997	PRPF18	100	99.715	Equus_caballus
ENSVVUG00000005453	-	92	63.608	ENSEEUG00000001171	-	100	63.608	Erinaceus_europaeus
ENSVVUG00000005453	-	100	81.924	ENSELUG00000022190	prpf18	100	81.924	Esox_lucius
ENSVVUG00000005453	-	100	99.715	ENSFCAG00000004436	-	100	99.715	Felis_catus
ENSVVUG00000005453	-	93	90.769	ENSFALG00000001912	-	97	90.769	Ficedula_albicollis
ENSVVUG00000005453	-	99	64.638	ENSFDAG00000010713	-	97	64.638	Fukomys_damarensis
ENSVVUG00000005453	-	94	99.062	ENSFDAG00000014026	-	100	99.062	Fukomys_damarensis
ENSVVUG00000005453	-	80	89.011	ENSFHEG00000020125	prpf18	98	89.139	Fundulus_heteroclitus
ENSVVUG00000005453	-	99	79.765	ENSGMOG00000012210	prpf18	99	79.765	Gadus_morhua
ENSVVUG00000005453	-	100	91.813	ENSGALG00000043593	-	100	91.813	Gallus_gallus
ENSVVUG00000005453	-	100	82.749	ENSGAFG00000006034	prpf18	100	82.749	Gambusia_affinis
ENSVVUG00000005453	-	100	81.287	ENSGACG00000012232	prpf18	100	81.287	Gasterosteus_aculeatus
ENSVVUG00000005453	-	100	92.105	ENSGAGG00000016878	-	100	92.105	Gopherus_agassizii
ENSVVUG00000005453	-	93	99.385	ENSGGOG00000025188	-	96	99.385	Gorilla_gorilla
ENSVVUG00000005453	-	100	84.503	ENSHBUG00000010264	prpf18	100	84.503	Haplochromis_burtoni
ENSVVUG00000005453	-	100	99.415	ENSHGLG00000018534	PRPF18	100	99.415	Heterocephalus_glaber_female
ENSVVUG00000005453	-	94	99.375	ENSHGLG00100012161	-	98	99.375	Heterocephalus_glaber_male
ENSVVUG00000005453	-	100	83.918	ENSHCOG00000015987	prpf18	100	83.918	Hippocampus_comes
ENSVVUG00000005453	-	100	81.870	ENSIPUG00000007432	prpf18	100	82.720	Ictalurus_punctatus
ENSVVUG00000005453	-	100	97.661	ENSSTOG00000008735	-	100	97.661	Ictidomys_tridecemlineatus
ENSVVUG00000005453	-	100	99.415	ENSJJAG00000024041	-	100	99.415	Jaculus_jaculus
ENSVVUG00000005453	-	100	72.046	ENSJJAG00000015191	-	100	72.046	Jaculus_jaculus
ENSVVUG00000005453	-	100	82.749	ENSKMAG00000012124	prpf18	100	82.749	Kryptolebias_marmoratus
ENSVVUG00000005453	-	99	83.432	ENSLBEG00000028466	prpf18	99	83.432	Labrus_bergylta
ENSVVUG00000005453	-	100	86.257	ENSLACG00000009885	prpf18	100	86.257	Latimeria_chalumnae
ENSVVUG00000005453	-	100	90.058	ENSLOCG00000016736	prpf18	100	90.058	Lepisosteus_oculatus
ENSVVUG00000005453	-	100	99.415	ENSLAFG00000007753	-	100	99.415	Loxodonta_africana
ENSVVUG00000005453	-	100	99.430	ENSMFAG00000000540	-	100	99.430	Macaca_fascicularis
ENSVVUG00000005453	-	100	99.430	ENSMMUG00000015071	PRPF18	100	99.430	Macaca_mulatta
ENSVVUG00000005453	-	100	99.430	ENSMNEG00000024679	-	100	99.430	Macaca_nemestrina
ENSVVUG00000005453	-	100	84.211	ENSMLEG00000031715	-	100	84.211	Mandrillus_leucophaeus
ENSVVUG00000005453	-	100	83.041	ENSMAMG00000006610	prpf18	100	83.041	Mastacembelus_armatus
ENSVVUG00000005453	-	100	84.503	ENSMZEG00005019392	prpf18	100	84.503	Maylandia_zebra
ENSVVUG00000005453	-	100	91.813	ENSMGAG00000005023	-	100	91.813	Meleagris_gallopavo
ENSVVUG00000005453	-	100	99.145	ENSMICG00000006572	-	100	99.145	Microcebus_murinus
ENSVVUG00000005453	-	100	99.415	ENSMOCG00000021468	Prpf18	100	99.415	Microtus_ochrogaster
ENSVVUG00000005453	-	100	82.749	ENSMMOG00000013012	prpf18	100	82.749	Mola_mola
ENSVVUG00000005453	-	100	85.673	ENSMODG00000024043	-	100	85.673	Monodelphis_domestica
ENSVVUG00000005453	-	96	92.604	ENSMODG00000016902	-	92	92.604	Monodelphis_domestica
ENSVVUG00000005453	-	100	77.714	ENSMALG00000005486	prpf18	100	78.000	Monopterus_albus
ENSVVUG00000005453	-	100	98.830	MGP_CAROLIEiJ_G0023143	Prpf18	100	98.830	Mus_caroli
ENSVVUG00000005453	-	100	98.538	ENSMUSG00000039449	Prpf18	100	98.630	Mus_musculus
ENSVVUG00000005453	-	100	99.123	MGP_PahariEiJ_G0019203	Prpf18	100	99.123	Mus_pahari
ENSVVUG00000005453	-	100	98.246	MGP_SPRETEiJ_G0024061	Prpf18	100	98.630	Mus_spretus
ENSVVUG00000005453	-	100	99.708	ENSMPUG00000000938	-	100	99.708	Mustela_putorius_furo
ENSVVUG00000005453	-	100	99.123	ENSMLUG00000009200	-	100	99.123	Myotis_lucifugus
ENSVVUG00000005453	-	100	98.830	ENSNGAG00000012500	-	100	98.830	Nannospalax_galili
ENSVVUG00000005453	-	67	91.739	ENSNGAG00000023550	-	82	91.739	Nannospalax_galili
ENSVVUG00000005453	-	100	84.503	ENSNBRG00000001778	prpf18	100	84.503	Neolamprologus_brichardi
ENSVVUG00000005453	-	100	99.430	ENSNLEG00000012186	-	100	99.430	Nomascus_leucogenys
ENSVVUG00000005453	-	100	64.912	ENSMEUG00000005032	-	100	64.912	Notamacropus_eugenii
ENSVVUG00000005453	-	77	80.755	ENSOPRG00000002153	-	100	80.755	Ochotona_princeps
ENSVVUG00000005453	-	100	98.538	ENSODEG00000003770	-	100	98.538	Octodon_degus
ENSVVUG00000005453	-	98	83.881	ENSONIG00000014854	prpf18	96	83.881	Oreochromis_niloticus
ENSVVUG00000005453	-	100	94.737	ENSOANG00000015404	-	100	94.737	Ornithorhynchus_anatinus
ENSVVUG00000005453	-	100	99.708	ENSOCUG00000027756	-	100	95.029	Oryctolagus_cuniculus
ENSVVUG00000005453	-	100	82.336	ENSORLG00000010293	prpf18	100	82.336	Oryzias_latipes
ENSVVUG00000005453	-	100	83.918	ENSORLG00020001530	prpf18	100	83.918	Oryzias_latipes_hni
ENSVVUG00000005453	-	100	84.211	ENSORLG00015013705	prpf18	100	84.211	Oryzias_latipes_hsok
ENSVVUG00000005453	-	100	85.088	ENSOMEG00000009167	prpf18	100	85.088	Oryzias_melastigma
ENSVVUG00000005453	-	100	98.830	ENSOGAG00000007294	-	100	98.830	Otolemur_garnettii
ENSVVUG00000005453	-	100	99.715	ENSOARG00000006243	-	100	99.715	Ovis_aries
ENSVVUG00000005453	-	100	99.430	ENSPPAG00000041959	-	100	99.430	Pan_paniscus
ENSVVUG00000005453	-	100	99.708	ENSPPRG00000000107	-	100	99.708	Panthera_pardus
ENSVVUG00000005453	-	100	99.415	ENSPTIG00000021094	-	100	99.415	Panthera_tigris_altaica
ENSVVUG00000005453	-	100	99.430	ENSPTRG00000002306	PRPF18	100	99.430	Pan_troglodytes
ENSVVUG00000005453	-	100	99.145	ENSPANG00000023346	-	100	99.145	Papio_anubis
ENSVVUG00000005453	-	86	98.113	ENSPKIG00000014128	prpf18	96	82.621	Paramormyrops_kingsleyae
ENSVVUG00000005453	-	100	92.398	ENSPSIG00000016064	-	100	92.398	Pelodiscus_sinensis
ENSVVUG00000005453	-	100	78.070	ENSPMGG00000016486	prpf18	100	78.070	Periophthalmus_magnuspinnatus
ENSVVUG00000005453	-	100	99.123	ENSPEMG00000013704	Prpf18	100	99.123	Peromyscus_maniculatus_bairdii
ENSVVUG00000005453	-	100	74.566	ENSPMAG00000000204	prpf18	100	74.566	Petromyzon_marinus
ENSVVUG00000005453	-	93	96.000	ENSPCIG00000012963	-	99	96.203	Phascolarctos_cinereus
ENSVVUG00000005453	-	100	81.481	ENSPFOG00000017611	prpf18	100	81.481	Poecilia_formosa
ENSVVUG00000005453	-	100	83.041	ENSPLAG00000000369	prpf18	100	83.041	Poecilia_latipinna
ENSVVUG00000005453	-	100	83.041	ENSPMEG00000005183	prpf18	100	83.041	Poecilia_mexicana
ENSVVUG00000005453	-	100	82.456	ENSPREG00000015232	prpf18	100	82.456	Poecilia_reticulata
ENSVVUG00000005453	-	100	99.123	ENSPPYG00000002101	PRPF18	100	99.123	Pongo_abelii
ENSVVUG00000005453	-	100	80.409	ENSPCAG00000010833	-	100	80.409	Procavia_capensis
ENSVVUG00000005453	-	100	91.813	ENSPCOG00000013057	-	100	91.813	Propithecus_coquereli
ENSVVUG00000005453	-	100	61.404	ENSPVAG00000002947	-	100	61.404	Pteropus_vampyrus
ENSVVUG00000005453	-	100	84.503	ENSPNYG00000003554	prpf18	100	84.503	Pundamilia_nyererei
ENSVVUG00000005453	-	100	84.900	ENSPNAG00000023151	prpf18	100	84.900	Pygocentrus_nattereri
ENSVVUG00000005453	-	100	98.246	ENSRNOG00000018396	Prpf18	100	98.246	Rattus_norvegicus
ENSVVUG00000005453	-	100	98.860	ENSRBIG00000028028	-	100	98.860	Rhinopithecus_bieti
ENSVVUG00000005453	-	100	99.145	ENSRROG00000040695	-	100	99.145	Rhinopithecus_roxellana
ENSVVUG00000005453	-	100	98.860	ENSSBOG00000034482	-	100	98.860	Saimiri_boliviensis_boliviensis
ENSVVUG00000005453	-	100	96.199	ENSSHAG00000016463	-	100	96.199	Sarcophilus_harrisii
ENSVVUG00000005453	-	100	77.193	ENSSHAG00000009669	-	100	77.193	Sarcophilus_harrisii
ENSVVUG00000005453	-	98	82.899	ENSSFOG00015022118	prpf18	100	76.945	Scleropages_formosus
ENSVVUG00000005453	-	77	44.528	ENSSFOG00015021154	-	89	48.927	Scleropages_formosus
ENSVVUG00000005453	-	100	82.749	ENSSMAG00000005308	prpf18	100	82.749	Scophthalmus_maximus
ENSVVUG00000005453	-	100	84.795	ENSSDUG00000015428	prpf18	100	84.795	Seriola_dumerili
ENSVVUG00000005453	-	100	84.795	ENSSLDG00000023989	prpf18	100	84.795	Seriola_lalandi_dorsalis
ENSVVUG00000005453	-	100	69.298	ENSSARG00000005307	-	100	69.298	Sorex_araneus
ENSVVUG00000005453	-	100	92.105	ENSSPUG00000002619	-	100	92.105	Sphenodon_punctatus
ENSVVUG00000005453	-	100	84.211	ENSSPAG00000019502	prpf18	100	84.211	Stegastes_partitus
ENSVVUG00000005453	-	100	100.000	ENSSSCG00000026354	-	100	100.000	Sus_scrofa
ENSVVUG00000005453	-	100	91.813	ENSTGUG00000002286	-	100	91.813	Taeniopygia_guttata
ENSVVUG00000005453	-	100	81.871	ENSTRUG00000011278	prpf18	100	81.871	Takifugu_rubripes
ENSVVUG00000005453	-	100	81.579	ENSTNIG00000000911	prpf18	100	81.579	Tetraodon_nigroviridis
ENSVVUG00000005453	-	80	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSVVUG00000005453	-	100	99.123	ENSTTRG00000011117	PRPF18	100	99.123	Tursiops_truncatus
ENSVVUG00000005453	-	95	96.615	ENSUAMG00000001815	-	94	96.615	Ursus_americanus
ENSVVUG00000005453	-	100	95.029	ENSUMAG00000012329	-	100	95.029	Ursus_maritimus
ENSVVUG00000005453	-	100	93.860	ENSVPAG00000011486	-	100	93.860	Vicugna_pacos
ENSVVUG00000005453	-	100	80.580	ENSXETG00000024057	prpf18	100	80.580	Xenopus_tropicalis
ENSVVUG00000005453	-	100	82.267	ENSXCOG00000020414	prpf18	100	82.267	Xiphophorus_couchianus
ENSVVUG00000005453	-	100	82.749	ENSXMAG00000004713	prpf18	91	82.749	Xiphophorus_maculatus