EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000005888 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 14444 bases
Position: chrNBDQ01000005.1:33641487-33655930
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000007787	RRM_1	PF00076.22	8.7e-08	1	1
ENSVVUP00000007784	RRM_1	PF00076.22	1.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000010275	-	399	-	ENSVVUP00000007784	132 (aa)	-	UPI0003441A47
ENSVVUT00000010277	-	303	-	ENSVVUP00000007787	100 (aa)	-	UPI0002C56E4D

Gene Model

Click here to download ENSVVUG00000005888's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000005888's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000005888	-	100	98.485	ENSG00000153914	SREK1	100	98.485	Homo_sapiens
ENSVVUG00000005888	-	81	72.840	ENSG00000116754	SRSF11	75	70.103	Homo_sapiens
ENSVVUG00000005888	-	83	71.084	ENSAPOG00000007244	-	60	71.084	Acanthochromis_polyacanthus
ENSVVUG00000005888	-	81	70.370	ENSAPOG00000004488	-	78	69.048	Acanthochromis_polyacanthus
ENSVVUG00000005888	-	81	71.605	ENSACIG00000012348	-	92	70.115	Amphilophus_citrinellus
ENSVVUG00000005888	-	87	87.356	ENSACIG00000015055	-	95	75.630	Amphilophus_citrinellus
ENSVVUG00000005888	-	81	70.370	ENSACIG00000018075	-	78	69.048	Amphilophus_citrinellus
ENSVVUG00000005888	-	87	85.057	ENSAOCG00000024368	-	82	90.123	Amphiprion_ocellaris
ENSVVUG00000005888	-	79	70.886	ENSAOCG00000000739	-	87	69.512	Amphiprion_ocellaris
ENSVVUG00000005888	-	81	70.370	ENSAPEG00000003619	SRSF11	78	69.048	Amphiprion_percula
ENSVVUG00000005888	-	87	87.356	ENSAPEG00000002218	-	90	90.361	Amphiprion_percula
ENSVVUG00000005888	-	82	70.732	ENSAPEG00000003142	SRSF11	86	71.084	Amphiprion_percula
ENSVVUG00000005888	-	83	89.157	ENSATEG00000009464	-	89	91.358	Anabas_testudineus
ENSVVUG00000005888	-	83	71.084	ENSATEG00000011691	srsf11	81	70.455	Anabas_testudineus
ENSVVUG00000005888	-	81	70.370	ENSATEG00000007534	-	78	69.048	Anabas_testudineus
ENSVVUG00000005888	-	100	96.000	ENSANAG00000031358	SREK1	100	96.000	Aotus_nancymaae
ENSVVUG00000005888	-	83	71.084	ENSACLG00000000623	srsf11	85	71.084	Astatotilapia_calliptera
ENSVVUG00000005888	-	100	97.000	ENSBTAG00000007321	SREK1	100	97.000	Bos_taurus
ENSVVUG00000005888	-	100	96.000	ENSCJAG00000015950	SREK1	100	96.000	Callithrix_jacchus
ENSVVUG00000005888	-	81	72.840	ENSCAFG00020017255	-	75	71.765	Canis_lupus_dingo
ENSVVUG00000005888	-	100	100.000	ENSCAFG00020019449	-	100	100.000	Canis_lupus_dingo
ENSVVUG00000005888	-	81	72.840	ENSCHIG00000025295	SRSF11	72	71.765	Capra_hircus
ENSVVUG00000005888	-	100	97.000	ENSCHIG00000025052	-	100	97.000	Capra_hircus
ENSVVUG00000005888	-	100	99.242	ENSTSYG00000036957	SREK1	100	99.242	Carlito_syrichta
ENSVVUG00000005888	-	81	70.370	ENSTSYG00000033270	-	66	63.830	Carlito_syrichta
ENSVVUG00000005888	-	100	96.000	ENSCCAG00000020591	SREK1	100	96.000	Cebus_capucinus
ENSVVUG00000005888	-	100	98.000	ENSCATG00000031482	SREK1	100	98.000	Cercocebus_atys
ENSVVUG00000005888	-	83	68.675	ENSCPBG00000022430	-	88	56.522	Chrysemys_picta_bellii
ENSVVUG00000005888	-	100	90.909	ENSCPBG00000026866	SREK1	89	94.828	Chrysemys_picta_bellii
ENSVVUG00000005888	-	100	98.000	ENSCANG00000030421	SREK1	100	98.000	Colobus_angolensis_palliatus
ENSVVUG00000005888	-	100	79.000	ENSCSEG00000013934	-	95	82.558	Cynoglossus_semilaevis
ENSVVUG00000005888	-	85	85.882	ENSCVAG00000002404	-	95	74.359	Cyprinodon_variegatus
ENSVVUG00000005888	-	81	70.370	ENSDARG00000098574	srsf11	95	69.767	Danio_rerio
ENSVVUG00000005888	-	100	96.970	ENSDORG00000023160	-	100	96.970	Dipodomys_ordii
ENSVVUG00000005888	-	81	72.840	ENSEASG00005007847	SRSF11	75	71.765	Equus_asinus_asinus
ENSVVUG00000005888	-	100	99.242	ENSEASG00005006832	-	100	99.242	Equus_asinus_asinus
ENSVVUG00000005888	-	100	99.242	ENSECAG00000035731	-	100	99.242	Equus_caballus
ENSVVUG00000005888	-	100	97.000	ENSFCAG00000036884	-	100	97.000	Felis_catus
ENSVVUG00000005888	-	81	72.840	ENSFCAG00000034448	-	76	70.103	Felis_catus
ENSVVUG00000005888	-	87	83.908	ENSFHEG00000020959	-	93	69.672	Fundulus_heteroclitus
ENSVVUG00000005888	-	100	88.000	ENSGALG00000043541	SREK1	85	92.857	Gallus_gallus
ENSVVUG00000005888	-	85	87.059	ENSGAFG00000001732	-	95	73.276	Gambusia_affinis
ENSVVUG00000005888	-	100	90.909	ENSGAGG00000006087	SREK1	89	94.828	Gopherus_agassizii
ENSVVUG00000005888	-	81	74.074	ENSGAGG00000022411	-	87	74.444	Gopherus_agassizii
ENSVVUG00000005888	-	100	98.485	ENSGGOG00000004737	SREK1	100	98.485	Gorilla_gorilla
ENSVVUG00000005888	-	95	81.053	ENSHBUG00000007082	-	87	74.359	Haplochromis_burtoni
ENSVVUG00000005888	-	83	83.133	ENSHCOG00000017228	-	75	85.185	Hippocampus_comes
ENSVVUG00000005888	-	83	71.084	ENSHCOG00000016860	-	85	71.084	Hippocampus_comes
ENSVVUG00000005888	-	100	98.000	ENSSTOG00000008850	SREK1	100	98.000	Ictidomys_tridecemlineatus
ENSVVUG00000005888	-	98	96.124	ENSJJAG00000008846	-	100	96.124	Jaculus_jaculus
ENSVVUG00000005888	-	100	78.000	ENSLBEG00000022954	-	89	72.358	Labrus_bergylta
ENSVVUG00000005888	-	83	71.084	ENSLBEG00000024167	srsf11	85	71.084	Labrus_bergylta
ENSVVUG00000005888	-	100	98.485	ENSMFAG00000039823	SREK1	100	98.485	Macaca_fascicularis
ENSVVUG00000005888	-	98	97.959	ENSMMUG00000014586	SREK1	90	97.959	Macaca_mulatta
ENSVVUG00000005888	-	100	98.000	ENSMNEG00000030723	SREK1	100	98.000	Macaca_nemestrina
ENSVVUG00000005888	-	100	98.000	ENSMLEG00000039078	SREK1	100	98.000	Mandrillus_leucophaeus
ENSVVUG00000005888	-	87	85.057	ENSMAMG00000003099	-	79	90.123	Mastacembelus_armatus
ENSVVUG00000005888	-	81	70.370	ENSMAMG00000015002	-	79	69.048	Mastacembelus_armatus
ENSVVUG00000005888	-	89	81.319	ENSMZEG00005005707	-	88	75.000	Maylandia_zebra
ENSVVUG00000005888	-	100	98.000	ENSMICG00000034959	SREK1	100	98.000	Microcebus_murinus
ENSVVUG00000005888	-	81	71.605	ENSMMOG00000016751	-	76	71.605	Mola_mola
ENSVVUG00000005888	-	81	70.370	ENSMMOG00000008877	-	80	70.370	Mola_mola
ENSVVUG00000005888	-	81	70.370	ENSMALG00000016608	srsf11	86	69.048	Monopterus_albus
ENSVVUG00000005888	-	87	86.207	ENSMALG00000017086	srek1	93	89.157	Monopterus_albus
ENSVVUG00000005888	-	81	72.840	MGP_CAROLIEiJ_G0025767	Srsf11	96	70.103	Mus_caroli
ENSVVUG00000005888	-	81	72.840	ENSMUSG00000055436	Srsf11	95	70.103	Mus_musculus
ENSVVUG00000005888	-	81	72.840	MGP_PahariEiJ_G0027217	Srsf11	96	70.103	Mus_pahari
ENSVVUG00000005888	-	81	72.840	MGP_SPRETEiJ_G0026719	Srsf11	96	70.103	Mus_spretus
ENSVVUG00000005888	-	100	96.970	ENSNGAG00000014631	-	100	96.970	Nannospalax_galili
ENSVVUG00000005888	-	95	81.053	ENSNBRG00000010656	-	87	74.359	Neolamprologus_brichardi
ENSVVUG00000005888	-	81	71.605	ENSNBRG00000020213	-	92	70.115	Neolamprologus_brichardi
ENSVVUG00000005888	-	100	98.000	ENSNLEG00000003827	SREK1	100	98.000	Nomascus_leucogenys
ENSVVUG00000005888	-	100	96.970	ENSODEG00000016218	-	100	96.970	Octodon_degus
ENSVVUG00000005888	-	81	70.370	ENSORLG00000030366	-	75	69.048	Oryzias_latipes
ENSVVUG00000005888	-	78	87.179	ENSORLG00000002711	-	69	85.542	Oryzias_latipes
ENSVVUG00000005888	-	81	86.420	ENSORLG00020012815	-	87	75.214	Oryzias_latipes_hni
ENSVVUG00000005888	-	81	70.370	ENSORLG00020009393	-	75	69.048	Oryzias_latipes_hni
ENSVVUG00000005888	-	94	78.723	ENSORLG00015020455	-	91	75.214	Oryzias_latipes_hsok
ENSVVUG00000005888	-	81	70.370	ENSORLG00015009374	-	75	69.048	Oryzias_latipes_hsok
ENSVVUG00000005888	-	100	98.485	ENSPPAG00000031605	SREK1	100	98.485	Pan_paniscus
ENSVVUG00000005888	-	100	97.000	ENSPPRG00000024617	SREK1	100	97.000	Panthera_pardus
ENSVVUG00000005888	-	100	97.000	ENSPTIG00000006608	SREK1	100	97.000	Panthera_tigris_altaica
ENSVVUG00000005888	-	100	98.485	ENSPTRG00000016936	SREK1	100	98.485	Pan_troglodytes
ENSVVUG00000005888	-	100	98.485	ENSPANG00000008953	SREK1	100	98.485	Papio_anubis
ENSVVUG00000005888	-	83	72.289	ENSPKIG00000021576	-	94	71.910	Paramormyrops_kingsleyae
ENSVVUG00000005888	-	87	83.908	ENSPMGG00000017029	-	94	69.027	Periophthalmus_magnuspinnatus
ENSVVUG00000005888	-	81	71.605	ENSPMGG00000000954	-	88	65.591	Periophthalmus_magnuspinnatus
ENSVVUG00000005888	-	98	61.000	ENSPMGG00000005045	-	77	64.773	Periophthalmus_magnuspinnatus
ENSVVUG00000005888	-	92	79.381	ENSPLAG00000008818	-	85	72.414	Poecilia_latipinna
ENSVVUG00000005888	-	92	79.381	ENSPLAG00000014609	-	85	72.414	Poecilia_latipinna
ENSVVUG00000005888	-	81	70.370	ENSPLAG00000009484	-	58	69.048	Poecilia_latipinna
ENSVVUG00000005888	-	92	79.381	ENSPMEG00000006824	-	85	72.414	Poecilia_mexicana
ENSVVUG00000005888	-	81	71.605	ENSPMEG00000018837	srsf11	70	70.588	Poecilia_mexicana
ENSVVUG00000005888	-	92	79.381	ENSPMEG00000006607	-	85	72.414	Poecilia_mexicana
ENSVVUG00000005888	-	81	70.370	ENSPMEG00000023453	-	58	69.048	Poecilia_mexicana
ENSVVUG00000005888	-	85	87.059	ENSPREG00000019922	-	95	77.500	Poecilia_reticulata
ENSVVUG00000005888	-	100	99.242	ENSPCOG00000026230	SREK1	100	99.242	Propithecus_coquereli
ENSVVUG00000005888	-	95	81.053	ENSPNYG00000007178	-	87	74.359	Pundamilia_nyererei
ENSVVUG00000005888	-	100	98.485	ENSRBIG00000033818	SREK1	100	98.485	Rhinopithecus_bieti
ENSVVUG00000005888	-	81	72.840	ENSRBIG00000042971	SRSF11	65	71.429	Rhinopithecus_bieti
ENSVVUG00000005888	-	100	98.000	ENSRROG00000017210	SREK1	100	98.000	Rhinopithecus_roxellana
ENSVVUG00000005888	-	100	96.000	ENSSBOG00000031230	SREK1	100	96.000	Saimiri_boliviensis_boliviensis
ENSVVUG00000005888	-	81	72.840	ENSSBOG00000033461	SRSF11	65	71.429	Saimiri_boliviensis_boliviensis
ENSVVUG00000005888	-	93	68.817	ENSSFOG00015016086	-	71	73.077	Scleropages_formosus
ENSVVUG00000005888	-	87	86.207	ENSSDUG00000010395	-	80	91.358	Seriola_dumerili
ENSVVUG00000005888	-	83	71.084	ENSSLDG00000015477	-	85	71.084	Seriola_lalandi_dorsalis
ENSVVUG00000005888	-	81	70.370	ENSSLDG00000012105	-	78	69.048	Seriola_lalandi_dorsalis
ENSVVUG00000005888	-	87	86.207	ENSSLDG00000016285	-	80	91.358	Seriola_lalandi_dorsalis
ENSVVUG00000005888	-	81	70.370	ENSSPAG00000016483	-	76	62.105	Stegastes_partitus
ENSVVUG00000005888	-	87	85.057	ENSSPAG00000022310	-	82	90.123	Stegastes_partitus
ENSVVUG00000005888	-	87	83.908	ENSTRUG00000022058	-	95	74.359	Takifugu_rubripes
ENSVVUG00000005888	-	98	100.000	ENSUAMG00000022662	-	90	100.000	Ursus_americanus
ENSVVUG00000005888	-	81	72.840	ENSUAMG00000008403	-	65	71.429	Ursus_americanus
ENSVVUG00000005888	-	81	70.370	ENSXCOG00000015127	-	90	69.048	Xiphophorus_couchianus
ENSVVUG00000005888	-	98	79.592	ENSXCOG00000017792	-	91	73.276	Xiphophorus_couchianus
ENSVVUG00000005888	-	90	68.889	ENSXCOG00000003220	-	71	73.171	Xiphophorus_couchianus
ENSVVUG00000005888	-	85	87.059	ENSXMAG00000028210	-	95	73.276	Xiphophorus_maculatus
ENSVVUG00000005888	-	81	70.370	ENSXMAG00000019180	SRSF11	56	69.048	Xiphophorus_maculatus