EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSVVUG00000006004 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Vulpes_vulpes
Status
putative
Strand
Minus strand
Length
5850 bases
Position
chrNBDQ01000024.1:19239928-19245777
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSVVUP00000007959G-patchPF01585.233e-1011
ENSVVUP00000007950G-patchPF01585.231.4e-0811
ENSVVUP00000007952G-patchPF01585.235.1e-0611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSVVUT00000010503-836-ENSVVUP00000007959135 (aa)--
ENSVVUT00000010495-3250-ENSVVUP00000007950450 (aa)--
ENSVVUT00000010497-3222-ENSVVUP00000007952418 (aa)--
Gene Model
Click here to download ENSVVUG00000006004's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000006004's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSVVUG00000006004-9183.740ENSVVUG00000019904-10083.740
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSVVUG00000006004-8585.217ENSG00000160818GPATCH49785.217Homo_sapiens
ENSVVUG00000006004-9347.727ENSAPOG00000008436gpatch45340.756Acanthochromis_polyacanthus
ENSVVUG00000006004-8488.496ENSAMEG00000014829GPATCH49864.502Ailuropoda_melanoleuca
ENSVVUG00000006004-8246.847ENSACIG00000017309-6558.228Amphilophus_citrinellus
ENSVVUG00000006004-6952.688ENSAOCG00000015494gpatch47636.478Amphiprion_ocellaris
ENSVVUG00000006004-6952.688ENSAPEG00000022243gpatch45140.517Amphiprion_percula
ENSVVUG00000006004-8485.841ENSANAG00000035354GPATCH49455.901Aotus_nancymaae
ENSVVUG00000006004-8247.899ENSACLG00000010456gpatch45155.952Astatotilapia_calliptera
ENSVVUG00000006004-7746.429ENSAMXG00000034049gpatch48336.413Astyanax_mexicanus
ENSVVUG00000006004-8880.672ENSBTAG00000000406GPATCH49558.473Bos_taurus
ENSVVUG00000006004-8878.151ENSCJAG00000031662-8378.151Callithrix_jacchus
ENSVVUG00000006004-8585.217ENSCJAG00000006048GPATCH49485.217Callithrix_jacchus
ENSVVUG00000006004-8474.336ENSCJAG00000001883-9274.336Callithrix_jacchus
ENSVVUG00000006004-9498.477ENSCAFG00000016788GPATCH49498.477Canis_familiaris
ENSVVUG00000006004-9190.244ENSCAFG00020006707-10090.244Canis_lupus_dingo
ENSVVUG00000006004-9291.129ENSCAFG00020005274-9791.129Canis_lupus_dingo
ENSVVUG00000006004-8879.832ENSCHIG00000021295GPATCH49457.794Capra_hircus
ENSVVUG00000006004-8686.207ENSTSYG00000026904-8286.207Carlito_syrichta
ENSVVUG00000006004-8580.000ENSCPOG00000013701-9780.000Cavia_porcellus
ENSVVUG00000006004-8585.217ENSCCAG00000036114GPATCH49485.217Cebus_capucinus
ENSVVUG00000006004-8882.353ENSCATG00000042152GPATCH47886.486Cercocebus_atys
ENSVVUG00000006004-8484.071ENSCLAG00000002967-9849.680Chinchilla_lanigera
ENSVVUG00000006004-8883.193ENSCSAG00000002161GPATCH49556.858Chlorocebus_sabaeus
ENSVVUG00000006004-8453.333ENSCPBG00000025803GPATCH46946.025Chrysemys_picta_bellii
ENSVVUG00000006004-7343.810ENSCING00000004717-7036.585Ciona_intestinalis
ENSVVUG00000006004-6942.000ENSCSAVG00000003297-6141.509Ciona_savignyi
ENSVVUG00000006004-8882.353ENSCANG00000030031GPATCH47886.486Colobus_angolensis_palliatus
ENSVVUG00000006004-9675.385ENSCGRG00001016898Gpatch47061.231Cricetulus_griseus_chok1gshd
ENSVVUG00000006004-9675.385ENSCGRG00000008399Gpatch47061.231Cricetulus_griseus_crigri
ENSVVUG00000006004-5955.000ENSCSEG00000012030gpatch45539.252Cynoglossus_semilaevis
ENSVVUG00000006004-8247.059ENSDARG00000091931gpatch47838.764Danio_rerio
ENSVVUG00000006004-8482.301ENSDNOG00000034673GPATCH49855.675Dasypus_novemcinctus
ENSVVUG00000006004-8679.310ENSDORG00000011332-7879.310Dipodomys_ordii
ENSVVUG00000006004-5447.945FBgn0039829CG155615632.479Drosophila_melanogaster
ENSVVUG00000006004-8882.353ENSETEG00000000659-9652.070Echinops_telfairi
ENSVVUG00000006004-8036.364ENSEBUG00000006498-5642.012Eptatretus_burgeri
ENSVVUG00000006004-8485.841ENSEASG00005018284GPATCH49859.556Equus_asinus_asinus
ENSVVUG00000006004-8684.746ENSECAG00000011135GPATCH49859.598Equus_caballus
ENSVVUG00000006004-8477.876ENSEEUG00000003221-9352.809Erinaceus_europaeus
ENSVVUG00000006004-8088.889ENSFCAG00000006554GPATCH48468.769Felis_catus
ENSVVUG00000006004-8348.276ENSFHEG00000003097gpatch45541.004Fundulus_heteroclitus
ENSVVUG00000006004-8445.000ENSGALG00000048365GPATCH45443.304Gallus_gallus
ENSVVUG00000006004-8446.957ENSGAFG00000021732gpatch46839.485Gambusia_affinis
ENSVVUG00000006004-8046.610ENSGACG00000013318gpatch46041.485Gasterosteus_aculeatus
ENSVVUG00000006004-8455.000ENSGAGG00000020710GPATCH46447.556Gopherus_agassizii
ENSVVUG00000006004-8287.387ENSGGOG00000000753GPATCH47887.387Gorilla_gorilla
ENSVVUG00000006004-8247.899ENSHBUG00000009675gpatch45055.952Haplochromis_burtoni
ENSVVUG00000006004-8785.470ENSHGLG00000011346-9385.470Heterocephalus_glaber_female
ENSVVUG00000006004-8485.965ENSHGLG00100018277-7985.965Heterocephalus_glaber_male
ENSVVUG00000006004-8245.133ENSHCOG00000007016gpatch45639.189Hippocampus_comes
ENSVVUG00000006004-8253.390ENSIPUG00000006348gpatch46541.518Ictalurus_punctatus
ENSVVUG00000006004-8583.478ENSSTOG00000020510GPATCH48883.478Ictidomys_tridecemlineatus
ENSVVUG00000006004-8247.107ENSKMAG00000015765gpatch45343.421Kryptolebias_marmoratus
ENSVVUG00000006004-9545.865ENSLBEG00000009364-6040.789Labrus_bergylta
ENSVVUG00000006004-8247.863ENSLACG00000009700GPATCH45643.498Latimeria_chalumnae
ENSVVUG00000006004-8242.276ENSLOCG00000008820gpatch46138.655Lepisosteus_oculatus
ENSVVUG00000006004-9650.221ENSLAFG00000028327-9949.890Loxodonta_africana
ENSVVUG00000006004-8286.486ENSMFAG00000030965GPATCH47886.486Macaca_fascicularis
ENSVVUG00000006004-8883.193ENSMMUG00000002624GPATCH47887.387Macaca_mulatta
ENSVVUG00000006004-8286.486ENSMNEG00000028844GPATCH47886.486Macaca_nemestrina
ENSVVUG00000006004-8285.586ENSMLEG00000037909GPATCH47885.586Mandrillus_leucophaeus
ENSVVUG00000006004-8247.899ENSMZEG00005017452gpatch46635.336Maylandia_zebra
ENSVVUG00000006004-8483.333ENSMAUG00000008406-9483.333Mesocricetus_auratus
ENSVVUG00000006004-8084.259ENSMICG00000013624GPATCH49459.843Microcebus_murinus
ENSVVUG00000006004-8573.913ENSMICG00000034025-9773.913Microcebus_murinus
ENSVVUG00000006004-8465.789ENSMICG00000038615-8772.727Microcebus_murinus
ENSVVUG00000006004-7379.592ENSMICG00000047155-8879.592Microcebus_murinus
ENSVVUG00000006004-8480.702ENSMOCG00000008875-10080.702Microtus_ochrogaster
ENSVVUG00000006004-8248.333ENSMMOG00000017095gpatch47658.537Mola_mola
ENSVVUG00000006004-8264.035ENSMODG00000016818-8952.128Monodelphis_domestica
ENSVVUG00000006004-8262.281ENSMODG00000014154-9652.444Monodelphis_domestica
ENSVVUG00000006004-8247.107ENSMALG00000003793gpatch45041.772Monopterus_albus
ENSVVUG00000006004-8483.186MGP_CAROLIEiJ_G0025152Gpatch48272.768Mus_caroli
ENSVVUG00000006004-8482.301ENSMUSG00000028069Gpatch48271.429Mus_musculus
ENSVVUG00000006004-8483.186MGP_PahariEiJ_G0026595-8273.214Mus_pahari
ENSVVUG00000006004-8482.301MGP_SPRETEiJ_G0026093Gpatch48271.875Mus_spretus
ENSVVUG00000006004-8880.672ENSMPUG00000004136-9962.664Mustela_putorius_furo
ENSVVUG00000006004-8483.186ENSMLUG00000009571GPATCH49857.113Myotis_lucifugus
ENSVVUG00000006004-8678.448ENSNGAG00000019958-8978.448Nannospalax_galili
ENSVVUG00000006004-8086.111ENSNLEG00000027678GPATCH48563.897Nomascus_leucogenys
ENSVVUG00000006004-8265.766ENSMEUG00000006861-9246.263Notamacropus_eugenii
ENSVVUG00000006004-8484.071ENSOPRG00000000586GPATCH49853.930Ochotona_princeps
ENSVVUG00000006004-8179.817ENSODEG00000005222-9579.817Octodon_degus
ENSVVUG00000006004-9677.519ENSODEG00000010437-9385.586Octodon_degus
ENSVVUG00000006004-6181.707ENSODEG00000016849-7581.707Octodon_degus
ENSVVUG00000006004-8248.739ENSONIG00000002261gpatch45440.586Oreochromis_niloticus
ENSVVUG00000006004-8483.186ENSOCUG00000025781-9850.866Oryctolagus_cuniculus
ENSVVUG00000006004-8146.429ENSORLG00000016102-10046.429Oryzias_latipes
ENSVVUG00000006004-7745.614ENSORLG00020013892gpatch45441.333Oryzias_latipes_hni
ENSVVUG00000006004-7845.217ENSORLG00015019725gpatch47335.593Oryzias_latipes_hsok
ENSVVUG00000006004-8484.956ENSOGAG00000006698-9854.644Otolemur_garnettii
ENSVVUG00000006004-8879.832ENSOARG00000006123GPATCH49457.794Ovis_aries
ENSVVUG00000006004-8287.387ENSPPAG00000028364-7887.387Pan_paniscus
ENSVVUG00000006004-8088.889ENSPPRG00000002106GPATCH49463.003Panthera_pardus
ENSVVUG00000006004-8488.496ENSPTIG00000006717GPATCH47990.090Panthera_tigris_altaica
ENSVVUG00000006004-8287.387ENSPTRG00000001464GPATCH47887.387Pan_troglodytes
ENSVVUG00000006004-8287.387ENSPANG00000018543GPATCH47887.387Papio_anubis
ENSVVUG00000006004-8454.167ENSPSIG00000011317GPATCH47047.598Pelodiscus_sinensis
ENSVVUG00000006004-8246.218ENSPMGG00000019375-8346.218Periophthalmus_magnuspinnatus
ENSVVUG00000006004-5755.696ENSPMAG00000009175gpatch46942.786Petromyzon_marinus
ENSVVUG00000006004-8245.946ENSPFOG00000011835gpatch45538.934Poecilia_formosa
ENSVVUG00000006004-8244.262ENSPLAG00000019504gpatch45638.525Poecilia_latipinna
ENSVVUG00000006004-8245.946ENSPMEG00000001375gpatch45638.934Poecilia_mexicana
ENSVVUG00000006004-8242.623ENSPREG00000017029gpatch45838.115Poecilia_reticulata
ENSVVUG00000006004-8485.841ENSPPYG00000000711-9857.356Pongo_abelii
ENSVVUG00000006004-8870.588ENSPCOG00000013948-7783.168Propithecus_coquereli
ENSVVUG00000006004-8683.621ENSPCOG00000023130-7983.621Propithecus_coquereli
ENSVVUG00000006004-8283.784ENSPVAG00000007505-8753.944Pteropus_vampyrus
ENSVVUG00000006004-8247.899ENSPNYG00000018461gpatch45240.870Pundamilia_nyererei
ENSVVUG00000006004-8481.416ENSRNOG00000018969Gpatch47160.923Rattus_norvegicus
ENSVVUG00000006004-8883.193ENSRBIG00000005742GPATCH47887.387Rhinopithecus_bieti
ENSVVUG00000006004-8883.193ENSRROG00000044157GPATCH47887.387Rhinopithecus_roxellana
ENSVVUG00000006004-8485.841ENSSBOG00000024840GPATCH49856.118Saimiri_boliviensis_boliviensis
ENSVVUG00000006004-8264.035ENSSHAG00000015436-9250.350Sarcophilus_harrisii
ENSVVUG00000006004-8247.107ENSSDUG00000006583gpatch45140.773Seriola_dumerili
ENSVVUG00000006004-8247.107ENSSLDG00000012365gpatch45140.773Seriola_lalandi_dorsalis
ENSVVUG00000006004-6356.180ENSSARG00000008606-6553.759Sorex_araneus
ENSVVUG00000006004-8455.833ENSSPUG00000002674GPATCH46747.598Sphenodon_punctatus
ENSVVUG00000006004-8247.107ENSSPAG00000011683gpatch45140.598Stegastes_partitus
ENSVVUG00000006004-8883.193ENSSSCG00000006481GPATCH49857.987Sus_scrofa
ENSVVUG00000006004-7948.718ENSTRUG00000020638-8348.718Takifugu_rubripes
ENSVVUG00000006004-6257.143ENSTNIG00000005156gpatch46941.921Tetraodon_nigroviridis
ENSVVUG00000006004-8879.832ENSTTRG00000001113GPATCH49857.871Tursiops_truncatus
ENSVVUG00000006004-8488.496ENSUAMG00000013407GPATCH49866.450Ursus_americanus
ENSVVUG00000006004-8488.496ENSUMAG00000017797GPATCH49866.017Ursus_maritimus
ENSVVUG00000006004-8250.847ENSXETG00000020397gpatch46642.544Xenopus_tropicalis
ENSVVUG00000006004-8246.610ENSXCOG00000003911gpatch45639.583Xiphophorus_couchianus
ENSVVUG00000006004-8244.262ENSXMAG00000024520gpatch45639.256Xiphophorus_maculatus

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