EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000006402 (Gene tree)
Gene ID: -
Gene Symbol: BLM
Alias: BS|RECQ2|RECQL3
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 97165 bases
Position: chrNBDQ01000002.1:39103703-39200867
Accession: 112921453
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000008545	HRDC	PF00570.23	5.5e-12	1	1
ENSVVUP00000008536	HRDC	PF00570.23	5.9e-12	1	1
ENSVVUP00000008524	HRDC	PF00570.23	6.2e-12	1	1
ENSVVUP00000008545	BDHCT	PF08072.11	4e-21	1	1
ENSVVUP00000008536	BDHCT	PF08072.11	4.1e-21	1	1
ENSVVUP00000008524	BDHCT	PF08072.11	4.4e-21	1	1
ENSVVUP00000008545	DEAD	PF00270.29	1.5e-19	1	1
ENSVVUP00000008524	DEAD	PF00270.29	1.7e-19	1	1
ENSVVUP00000008536	DEAD	PF00270.29	3.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000011268	BLM-203	4237	-	ENSVVUP00000008545	1307 (aa)	-	-
ENSVVUT00000011240	BLM-201	4576	-	ENSVVUP00000008524	1420 (aa)	XP_025856527	UPI000DF6984E
ENSVVUT00000011258	BLM-202	4384	-	ENSVVUP00000008536	1356 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000006402's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000006402's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000006402	BLM	100	90.110	ENSG00000197299	BLM	95	94.700	Homo_sapiens
ENSVVUG00000006402	BLM	51	77.778	ENSAPOG00000017966	blm	61	63.699	Acanthochromis_polyacanthus
ENSVVUG00000006402	BLM	100	94.780	ENSAMEG00000013843	BLM	100	88.741	Ailuropoda_melanoleuca
ENSVVUG00000006402	BLM	61	77.236	ENSACIG00000023762	blm	57	77.236	Amphilophus_citrinellus
ENSVVUG00000006402	BLM	65	63.798	ENSAOCG00000003318	blm	80	63.798	Amphiprion_ocellaris
ENSVVUG00000006402	BLM	64	63.798	ENSAPEG00000018105	blm	80	63.798	Amphiprion_percula
ENSVVUG00000006402	BLM	82	78.320	ENSATEG00000006421	blm	76	78.320	Anabas_testudineus
ENSVVUG00000006402	BLM	81	57.952	ENSAPLG00000006878	BLM	98	57.750	Anas_platyrhynchos
ENSVVUG00000006402	BLM	75	58.217	ENSACAG00000014275	BLM	50	81.984	Anolis_carolinensis
ENSVVUG00000006402	BLM	100	89.011	ENSANAG00000038415	BLM	95	94.009	Aotus_nancymaae
ENSVVUG00000006402	BLM	82	78.320	ENSACLG00000020354	blm	77	78.320	Astatotilapia_calliptera
ENSVVUG00000006402	BLM	51	67.631	ENSAMXG00000016970	blm	52	69.615	Astyanax_mexicanus
ENSVVUG00000006402	BLM	92	96.262	ENSBTAG00000020301	BLM	95	96.865	Bos_taurus
ENSVVUG00000006402	BLM	100	80.713	ENSCJAG00000009803	BLM	100	80.643	Callithrix_jacchus
ENSVVUG00000006402	BLM	100	99.313	ENSCAFG00000012385	BLM	100	98.873	Canis_familiaris
ENSVVUG00000006402	BLM	100	99.451	ENSCAFG00020016111	BLM	100	98.944	Canis_lupus_dingo
ENSVVUG00000006402	BLM	100	90.934	ENSCHIG00000010329	BLM	95	96.238	Capra_hircus
ENSVVUG00000006402	BLM	91	93.318	ENSTSYG00000012368	BLM	100	79.679	Carlito_syrichta
ENSVVUG00000006402	BLM	87	84.549	ENSCAPG00000017976	BLM	100	84.549	Cavia_aperea
ENSVVUG00000006402	BLM	100	79.470	ENSCPOG00000001761	BLM	100	75.332	Cavia_porcellus
ENSVVUG00000006402	BLM	100	89.148	ENSCCAG00000023069	BLM	95	94.470	Cebus_capucinus
ENSVVUG00000006402	BLM	100	89.148	ENSCATG00000040609	BLM	95	94.009	Cercocebus_atys
ENSVVUG00000006402	BLM	99	88.599	ENSCLAG00000012111	BLM	96	88.599	Chinchilla_lanigera
ENSVVUG00000006402	BLM	100	89.286	ENSCSAG00000017040	BLM	96	89.286	Chlorocebus_sabaeus
ENSVVUG00000006402	BLM	91	95.588	ENSCHOG00000006255	BLM	86	92.857	Choloepus_hoffmanni
ENSVVUG00000006402	BLM	87	71.370	ENSCPBG00000025000	BLM	92	71.272	Chrysemys_picta_bellii
ENSVVUG00000006402	BLM	87	73.372	ENSCANG00000034808	BLM	100	73.957	Colobus_angolensis_palliatus
ENSVVUG00000006402	BLM	100	88.462	ENSCGRG00001024897	Blm	96	88.462	Cricetulus_griseus_chok1gshd
ENSVVUG00000006402	BLM	66	92.424	ENSCGRG00000016261	Blm	90	94.186	Cricetulus_griseus_crigri
ENSVVUG00000006402	BLM	79	63.711	ENSCSEG00000013483	blm	86	51.395	Cynoglossus_semilaevis
ENSVVUG00000006402	BLM	83	63.501	ENSDARG00000077089	blm	66	80.795	Danio_rerio
ENSVVUG00000006402	BLM	99	88.446	ENSDNOG00000010159	BLM	96	88.446	Dasypus_novemcinctus
ENSVVUG00000006402	BLM	74	79.206	ENSDORG00000011033	Blm	100	79.206	Dipodomys_ordii
ENSVVUG00000006402	BLM	55	47.047	FBgn0002906	Blm	51	41.229	Drosophila_melanogaster
ENSVVUG00000006402	BLM	82	85.000	ENSETEG00000015019	BLM	82	85.000	Echinops_telfairi
ENSVVUG00000006402	BLM	100	86.755	ENSEASG00005006727	BLM	100	84.431	Equus_asinus_asinus
ENSVVUG00000006402	BLM	100	86.230	ENSECAG00000011405	BLM	100	84.965	Equus_caballus
ENSVVUG00000006402	BLM	98	74.731	ENSEEUG00000001434	BLM	97	74.803	Erinaceus_europaeus
ENSVVUG00000006402	BLM	74	79.675	ENSELUG00000019098	blm	64	79.675	Esox_lucius
ENSVVUG00000006402	BLM	100	87.417	ENSFCAG00000006087	BLM	95	96.774	Felis_catus
ENSVVUG00000006402	BLM	75	69.742	ENSFALG00000010981	BLM	81	69.262	Ficedula_albicollis
ENSVVUG00000006402	BLM	99	72.603	ENSFDAG00000012658	BLM	100	69.444	Fukomys_damarensis
ENSVVUG00000006402	BLM	85	63.760	ENSFHEG00000002553	blm	83	63.896	Fundulus_heteroclitus
ENSVVUG00000006402	BLM	83	74.036	ENSGMOG00000016431	blm	78	74.036	Gadus_morhua
ENSVVUG00000006402	BLM	77	70.213	ENSGALG00000008256	BLM	80	69.947	Gallus_gallus
ENSVVUG00000006402	BLM	65	64.011	ENSGAFG00000001117	blm	65	64.609	Gambusia_affinis
ENSVVUG00000006402	BLM	67	63.760	ENSGACG00000010863	blm	100	72.779	Gasterosteus_aculeatus
ENSVVUG00000006402	BLM	62	77.915	ENSGAGG00000005383	BLM	93	77.915	Gopherus_agassizii
ENSVVUG00000006402	BLM	100	89.835	ENSGGOG00000007710	BLM	95	94.470	Gorilla_gorilla
ENSVVUG00000006402	BLM	82	78.320	ENSHBUG00000015943	blm	77	78.320	Haplochromis_burtoni
ENSVVUG00000006402	BLM	100	87.912	ENSHGLG00000013231	BLM	93	87.637	Heterocephalus_glaber_female
ENSVVUG00000006402	BLM	72	56.414	ENSHCOG00000011455	blm	83	60.588	Hippocampus_comes
ENSVVUG00000006402	BLM	77	52.337	ENSIPUG00000000529	blm	59	76.702	Ictalurus_punctatus
ENSVVUG00000006402	BLM	100	89.560	ENSSTOG00000005000	BLM	96	89.560	Ictidomys_tridecemlineatus
ENSVVUG00000006402	BLM	72	83.566	ENSJJAG00000016322	Blm	94	84.651	Jaculus_jaculus
ENSVVUG00000006402	BLM	51	78.049	ENSKMAG00000016608	blm	58	64.295	Kryptolebias_marmoratus
ENSVVUG00000006402	BLM	83	69.919	ENSLACG00000006490	BLM	94	69.565	Latimeria_chalumnae
ENSVVUG00000006402	BLM	98	65.301	ENSLOCG00000014302	blm	94	64.843	Lepisosteus_oculatus
ENSVVUG00000006402	BLM	100	89.148	ENSMFAG00000042982	BLM	95	94.240	Macaca_fascicularis
ENSVVUG00000006402	BLM	100	89.286	ENSMMUG00000019526	BLM	95	94.240	Macaca_mulatta
ENSVVUG00000006402	BLM	97	89.011	ENSMNEG00000031251	BLM	92	94.609	Macaca_nemestrina
ENSVVUG00000006402	BLM	100	80.132	ENSMLEG00000032934	BLM	100	78.881	Mandrillus_leucophaeus
ENSVVUG00000006402	BLM	65	64.499	ENSMAMG00000008726	blm	84	51.498	Mastacembelus_armatus
ENSVVUG00000006402	BLM	82	78.320	ENSMZEG00005022323	blm	77	78.320	Maylandia_zebra
ENSVVUG00000006402	BLM	100	88.599	ENSMAUG00000008953	Blm	95	88.599	Mesocricetus_auratus
ENSVVUG00000006402	BLM	100	88.599	ENSMICG00000034442	BLM	95	93.779	Microcebus_murinus
ENSVVUG00000006402	BLM	100	76.821	ENSMOCG00000016367	Blm	99	74.354	Microtus_ochrogaster
ENSVVUG00000006402	BLM	60	77.507	ENSMMOG00000006959	blm	57	77.507	Mola_mola
ENSVVUG00000006402	BLM	99	84.247	ENSMODG00000019449	BLM	95	84.247	Monodelphis_domestica
ENSVVUG00000006402	BLM	72	70.000	ENSMALG00000007323	blm	69	62.353	Monopterus_albus
ENSVVUG00000006402	BLM	100	75.329	MGP_CAROLIEiJ_G0029907	Blm	100	73.366	Mus_caroli
ENSVVUG00000006402	BLM	99	86.438	ENSMUSG00000030528	Blm	95	86.676	Mus_musculus
ENSVVUG00000006402	BLM	99	87.260	MGP_PahariEiJ_G0013129	Blm	95	87.123	Mus_pahari
ENSVVUG00000006402	BLM	99	86.202	MGP_SPRETEiJ_G0031009	Blm	95	86.538	Mus_spretus
ENSVVUG00000006402	BLM	83	97.206	ENSMPUG00000015657	BLM	93	97.206	Mustela_putorius_furo
ENSVVUG00000006402	BLM	100	90.274	ENSMLUG00000014697	BLM	96	90.274	Myotis_lucifugus
ENSVVUG00000006402	BLM	100	77.377	ENSNGAG00000001275	Blm	100	76.837	Nannospalax_galili
ENSVVUG00000006402	BLM	82	78.049	ENSNBRG00000019702	blm	53	78.049	Neolamprologus_brichardi
ENSVVUG00000006402	BLM	100	86.813	ENSNLEG00000012087	BLM	95	89.862	Nomascus_leucogenys
ENSVVUG00000006402	BLM	99	68.285	ENSMEUG00000007253	BLM	99	61.246	Notamacropus_eugenii
ENSVVUG00000006402	BLM	95	95.899	ENSOPRG00000011667	BLM	90	95.298	Ochotona_princeps
ENSVVUG00000006402	BLM	72	79.012	ENSODEG00000015373	BLM	100	76.209	Octodon_degus
ENSVVUG00000006402	BLM	86	70.396	ENSONIG00000015193	blm	89	61.321	Oreochromis_niloticus
ENSVVUG00000006402	BLM	50	94.398	ENSOANG00000009316	-	99	82.575	Ornithorhynchus_anatinus
ENSVVUG00000006402	BLM	99	74.000	ENSOCUG00000013969	BLM	99	73.045	Oryctolagus_cuniculus
ENSVVUG00000006402	BLM	62	77.778	ENSORLG00000008110	blm	59	77.778	Oryzias_latipes
ENSVVUG00000006402	BLM	62	77.778	ENSORLG00020004812	blm	59	77.778	Oryzias_latipes_hni
ENSVVUG00000006402	BLM	62	78.049	ENSORLG00015018640	blm	68	77.838	Oryzias_latipes_hsok
ENSVVUG00000006402	BLM	64	64.110	ENSOMEG00000023545	blm	63	63.984	Oryzias_melastigma
ENSVVUG00000006402	BLM	100	74.829	ENSOGAG00000005708	BLM	100	74.826	Otolemur_garnettii
ENSVVUG00000006402	BLM	100	91.484	ENSOARG00000012875	BLM	96	91.484	Ovis_aries
ENSVVUG00000006402	BLM	100	89.698	ENSPPAG00000032173	BLM	95	94.470	Pan_paniscus
ENSVVUG00000006402	BLM	100	93.544	ENSPPRG00000002471	BLM	95	97.005	Panthera_pardus
ENSVVUG00000006402	BLM	100	92.582	ENSPTIG00000016168	BLM	95	96.110	Panthera_tigris_altaica
ENSVVUG00000006402	BLM	100	89.423	ENSPTRG00000007460	BLM	95	94.240	Pan_troglodytes
ENSVVUG00000006402	BLM	100	89.286	ENSPANG00000018572	BLM	95	94.470	Papio_anubis
ENSVVUG00000006402	BLM	86	70.776	ENSPKIG00000008954	blm	68	70.776	Paramormyrops_kingsleyae
ENSVVUG00000006402	BLM	51	65.241	ENSPMGG00000006629	blm	80	65.789	Periophthalmus_magnuspinnatus
ENSVVUG00000006402	BLM	100	88.203	ENSPEMG00000017348	Blm	96	87.791	Peromyscus_maniculatus_bairdii
ENSVVUG00000006402	BLM	50	58.567	ENSPMAG00000000445	blm	95	58.906	Petromyzon_marinus
ENSVVUG00000006402	BLM	99	83.425	ENSPCIG00000006609	BLM	95	82.853	Phascolarctos_cinereus
ENSVVUG00000006402	BLM	56	77.236	ENSPFOG00000005059	blm	52	77.236	Poecilia_formosa
ENSVVUG00000006402	BLM	55	77.236	ENSPLAG00000017344	blm	56	64.834	Poecilia_latipinna
ENSVVUG00000006402	BLM	56	77.236	ENSPMEG00000000321	blm	52	77.236	Poecilia_mexicana
ENSVVUG00000006402	BLM	67	63.736	ENSPREG00000007715	blm	64	64.011	Poecilia_reticulata
ENSVVUG00000006402	BLM	100	88.874	ENSPPYG00000006784	BLM	96	88.874	Pongo_abelii
ENSVVUG00000006402	BLM	73	90.909	ENSPCAG00000008960	BLM	73	90.909	Procavia_capensis
ENSVVUG00000006402	BLM	100	78.022	ENSPCOG00000000439	BLM	100	76.647	Propithecus_coquereli
ENSVVUG00000006402	BLM	81	96.785	ENSPVAG00000011642	BLM	83	96.785	Pteropus_vampyrus
ENSVVUG00000006402	BLM	83	52.513	ENSPNYG00000010956	blm	84	53.038	Pundamilia_nyererei
ENSVVUG00000006402	BLM	55	70.862	ENSPNAG00000011714	blm	52	70.682	Pygocentrus_nattereri
ENSVVUG00000006402	BLM	99	86.283	ENSRNOG00000011213	Blm	95	86.008	Rattus_norvegicus
ENSVVUG00000006402	BLM	100	88.736	ENSRBIG00000029656	BLM	95	93.779	Rhinopithecus_bieti
ENSVVUG00000006402	BLM	100	80.280	ENSRROG00000037871	BLM	95	93.779	Rhinopithecus_roxellana
ENSVVUG00000006402	BLM	100	72.899	ENSSBOG00000030957	BLM	100	81.162	Saimiri_boliviensis_boliviensis
ENSVVUG00000006402	BLM	99	83.128	ENSSHAG00000007988	BLM	96	82.990	Sarcophilus_harrisii
ENSVVUG00000006402	BLM	51	78.904	ENSSFOG00015015462	blm	55	78.904	Scleropages_formosus
ENSVVUG00000006402	BLM	55	77.507	ENSSMAG00000001120	blm	86	56.250	Scophthalmus_maximus
ENSVVUG00000006402	BLM	83	64.071	ENSSDUG00000010955	blm	80	64.393	Seriola_dumerili
ENSVVUG00000006402	BLM	83	63.934	ENSSLDG00000000634	blm	80	64.256	Seriola_lalandi_dorsalis
ENSVVUG00000006402	BLM	90	81.319	ENSSARG00000006398	BLM	91	81.319	Sorex_araneus
ENSVVUG00000006402	BLM	75	58.092	ENSSPUG00000000013	BLM	89	67.355	Sphenodon_punctatus
ENSVVUG00000006402	BLM	63	77.236	ENSSPAG00000013999	blm	58	77.236	Stegastes_partitus
ENSVVUG00000006402	BLM	100	90.247	ENSSSCG00000001816	BLM	95	91.343	Sus_scrofa
ENSVVUG00000006402	BLM	80	52.487	ENSTGUG00000009959	-	99	52.267	Taeniopygia_guttata
ENSVVUG00000006402	BLM	62	76.423	ENSTRUG00000019860	blm	62	74.670	Takifugu_rubripes
ENSVVUG00000006402	BLM	82	76.965	ENSTNIG00000019246	blm	72	63.187	Tetraodon_nigroviridis
ENSVVUG00000006402	BLM	77	95.868	ENSTBEG00000006706	BLM	76	95.868	Tupaia_belangeri
ENSVVUG00000006402	BLM	100	85.430	ENSTTRG00000016386	BLM	100	83.508	Tursiops_truncatus
ENSVVUG00000006402	BLM	100	94.780	ENSUMAG00000009105	BLM	100	94.672	Ursus_maritimus
ENSVVUG00000006402	BLM	99	85.522	ENSVPAG00000000085	BLM	99	80.656	Vicugna_pacos
ENSVVUG00000006402	BLM	95	71.781	ENSXETG00000007847	blm	56	71.703	Xenopus_tropicalis
ENSVVUG00000006402	BLM	85	69.919	ENSXCOG00000020227	blm	78	69.919	Xiphophorus_couchianus
ENSVVUG00000006402	BLM	86	63.649	ENSXMAG00000002951	blm	82	63.923	Xiphophorus_maculatus