EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000006545 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 243943 bases
Position: chrNBDQ01000038.1:12950923-13194865
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000008747	MTS	PF05175.14	3.6e-05	1	1
ENSVVUP00000008756	MTS	PF05175.14	3.8e-05	1	1
ENSVVUP00000008772	MTS	PF05175.14	0.0001	1	1
ENSVVUP00000008783	MTS	PF05175.14	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000011576	-	2088	-	ENSVVUP00000008783	437 (aa)	-	-
ENSVVUT00000011561	-	1677	-	ENSVVUP00000008772	457 (aa)	-	-
ENSVVUT00000011539	-	1992	-	ENSVVUP00000008756	427 (aa)	-	-
ENSVVUT00000011529	-	2181	-	ENSVVUP00000008747	417 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000006545's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000006545's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000006545	-	98	72.683	ENSVVUG00000017717	CARM1	93	73.317
ENSVVUG00000006545	-	71	37.013	ENSVVUG00000020492	-	60	37.013
ENSVVUG00000006545	-	75	35.443	ENSVVUG00000010077	-	58	35.443
ENSVVUG00000006545	-	74	34.295	ENSVVUG00000002395	-	96	34.295
ENSVVUG00000006545	-	73	33.654	ENSVVUG00000021435	PRMT1	91	33.876

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000006545	-	97	61.139	ENSAPOG00000020684	carm1l	87	61.194	Acanthochromis_polyacanthus
ENSVVUG00000006545	-	96	60.794	ENSACIG00000024292	-	92	60.794	Amphilophus_citrinellus
ENSVVUG00000006545	-	95	61.965	ENSAOCG00000016803	carm1l	90	61.965	Amphiprion_ocellaris
ENSVVUG00000006545	-	96	61.443	ENSAPEG00000011757	carm1l	86	61.443	Amphiprion_percula
ENSVVUG00000006545	-	97	86.634	ENSACAG00000003227	-	89	86.634	Anolis_carolinensis
ENSVVUG00000006545	-	96	60.714	ENSACLG00000009998	-	85	60.714	Astatotilapia_calliptera
ENSVVUG00000006545	-	97	71.287	ENSAMXG00000020903	carm1l	88	71.287	Astyanax_mexicanus
ENSVVUG00000006545	-	76	99.684	ENSCAFG00000002042	-	100	99.684	Canis_familiaris
ENSVVUG00000006545	-	97	89.851	ENSCPBG00000025471	-	79	89.851	Chrysemys_picta_bellii
ENSVVUG00000006545	-	96	69.750	ENSDARG00000091531	carm1l	98	60.314	Danio_rerio
ENSVVUG00000006545	-	96	94.776	ENSEASG00005010358	-	92	93.381	Equus_asinus_asinus
ENSVVUG00000006545	-	97	95.050	ENSECAG00000009736	-	98	93.853	Equus_caballus
ENSVVUG00000006545	-	96	89.552	ENSGAGG00000021536	-	79	89.552	Gopherus_agassizii
ENSVVUG00000006545	-	97	62.315	ENSHBUG00000022386	-	88	62.376	Haplochromis_burtoni
ENSVVUG00000006545	-	97	84.158	ENSHGLG00000019207	-	97	76.940	Heterocephalus_glaber_female
ENSVVUG00000006545	-	97	70.545	ENSIPUG00000024779	co-prmt	96	70.545	Ictalurus_punctatus
ENSVVUG00000006545	-	97	74.010	ENSLOCG00000012543	carm1l	97	64.365	Lepisosteus_oculatus
ENSVVUG00000006545	-	95	60.750	ENSMAMG00000000357	carm1l	90	60.750	Mastacembelus_armatus
ENSVVUG00000006545	-	95	62.657	ENSMZEG00005021030	-	98	62.657	Maylandia_zebra
ENSVVUG00000006545	-	97	89.604	ENSMICG00000029542	-	98	82.561	Microcebus_murinus
ENSVVUG00000006545	-	87	93.906	ENSMLUG00000022735	-	100	93.906	Myotis_lucifugus
ENSVVUG00000006545	-	97	59.753	ENSNBRG00000013194	-	93	59.801	Neolamprologus_brichardi
ENSVVUG00000006545	-	96	63.027	ENSONIG00000016604	-	87	63.027	Oreochromis_niloticus
ENSVVUG00000006545	-	97	56.127	ENSOMEG00000011226	-	77	56.079	Oryzias_melastigma
ENSVVUG00000006545	-	96	95.012	ENSPPRG00000000748	-	85	95.012	Panthera_pardus
ENSVVUG00000006545	-	97	95.050	ENSPTIG00000021167	-	91	95.274	Panthera_tigris_altaica
ENSVVUG00000006545	-	97	69.802	ENSPKIG00000022185	carm1l	98	60.356	Paramormyrops_kingsleyae
ENSVVUG00000006545	-	76	91.139	ENSPSIG00000017939	-	100	91.139	Pelodiscus_sinensis
ENSVVUG00000006545	-	87	86.777	ENSPCIG00000030606	-	96	89.231	Phascolarctos_cinereus
ENSVVUG00000006545	-	95	62.657	ENSPNYG00000016436	-	98	62.657	Pundamilia_nyererei
ENSVVUG00000006545	-	99	64.798	ENSPNAG00000026491	carm1l	98	56.612	Pygocentrus_nattereri
ENSVVUG00000006545	-	76	89.241	ENSSHAG00000002395	-	100	89.241	Sarcophilus_harrisii
ENSVVUG00000006545	-	97	70.297	ENSSFOG00015018872	carm1l	98	61.419	Scleropages_formosus
ENSVVUG00000006545	-	95	63.728	ENSSDUG00000018596	-	88	63.728	Seriola_dumerili
ENSVVUG00000006545	-	95	63.476	ENSSLDG00000013596	carm1l	88	63.476	Seriola_lalandi_dorsalis
ENSVVUG00000006545	-	99	86.375	ENSSPUG00000001722	-	88	88.722	Sphenodon_punctatus
ENSVVUG00000006545	-	96	58.571	ENSSPAG00000003543	carm1l	88	58.571	Stegastes_partitus
ENSVVUG00000006545	-	97	92.060	ENSSSCG00000039823	-	86	89.227	Sus_scrofa
ENSVVUG00000006545	-	56	52.301	ENSTRUG00000020502	-	76	51.429	Takifugu_rubripes
ENSVVUG00000006545	-	99	94.417	ENSUMAG00000018187	-	91	96.040	Ursus_maritimus