EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000006586 (Gene tree)
Gene ID: -
Gene Symbol: PNLDC1
Alias: FLJ40240|dJ195P10.2
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 29423 bases
Position: chrNBDQ01000158.1:339210-368632
Accession: 21185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000008803	CAF1	PF04857.20	3e-77	1	1
ENSVVUP00000008817	CAF1	PF04857.20	9.2e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000011619	PNLDC1-202	1771	-	ENSVVUP00000008817	493 (aa)	-	-
ENSVVUT00000011598	PNLDC1-201	2167	-	ENSVVUP00000008803	594 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000006586's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000006586's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000006586	PNLDC1	99	87.860	ENSG00000146453	PNLDC1	96	88.650	Homo_sapiens
ENSVVUG00000006586	PNLDC1	98	96.289	ENSAMEG00000015371	PNLDC1	96	95.499	Ailuropoda_melanoleuca
ENSVVUG00000006586	PNLDC1	98	59.959	ENSAPLG00000007014	PNLDC1	94	59.514	Anas_platyrhynchos
ENSVVUG00000006586	PNLDC1	98	60.124	ENSACAG00000013667	PNLDC1	96	60.352	Anolis_carolinensis
ENSVVUG00000006586	PNLDC1	99	87.269	ENSANAG00000034713	PNLDC1	100	87.867	Aotus_nancymaae
ENSVVUG00000006586	PNLDC1	99	92.593	ENSBTAG00000015166	PNLDC1	92	93.634	Bos_taurus
ENSVVUG00000006586	PNLDC1	99	86.242	ENSCJAG00000011865	PNLDC1	96	87.064	Callithrix_jacchus
ENSVVUG00000006586	PNLDC1	99	99.795	ENSCAFG00000000740	PNLDC1	99	96.283	Canis_familiaris
ENSVVUG00000006586	PNLDC1	99	97.125	ENSCAFG00020017742	PNLDC1	94	99.367	Canis_lupus_dingo
ENSVVUG00000006586	PNLDC1	99	89.733	ENSCHIG00000003141	PNLDC1	96	90.998	Capra_hircus
ENSVVUG00000006586	PNLDC1	99	86.653	ENSTSYG00000005606	PNLDC1	96	86.693	Carlito_syrichta
ENSVVUG00000006586	PNLDC1	94	68.035	ENSCAPG00000011893	PNLDC1	96	63.281	Cavia_aperea
ENSVVUG00000006586	PNLDC1	99	80.533	ENSCPOG00000019565	PNLDC1	96	80.469	Cavia_porcellus
ENSVVUG00000006586	PNLDC1	99	87.269	ENSCCAG00000026232	PNLDC1	96	87.867	Cebus_capucinus
ENSVVUG00000006586	PNLDC1	99	87.064	ENSCATG00000033196	PNLDC1	96	88.063	Cercocebus_atys
ENSVVUG00000006586	PNLDC1	98	84.504	ENSCLAG00000003228	PNLDC1	96	85.323	Chinchilla_lanigera
ENSVVUG00000006586	PNLDC1	99	87.321	ENSCSAG00000012478	PNLDC1	95	87.500	Chlorocebus_sabaeus
ENSVVUG00000006586	PNLDC1	95	67.308	ENSCPBG00000004050	PNLDC1	100	66.211	Chrysemys_picta_bellii
ENSVVUG00000006586	PNLDC1	99	87.269	ENSCANG00000043076	PNLDC1	93	88.272	Colobus_angolensis_palliatus
ENSVVUG00000006586	PNLDC1	99	83.162	ENSCGRG00001007470	-	96	83.366	Cricetulus_griseus_chok1gshd
ENSVVUG00000006586	PNLDC1	99	65.503	ENSCGRG00001011981	-	95	65.949	Cricetulus_griseus_chok1gshd
ENSVVUG00000006586	PNLDC1	99	68.583	ENSCGRG00000003103	-	95	68.885	Cricetulus_griseus_crigri
ENSVVUG00000006586	PNLDC1	99	83.162	ENSCGRG00000010221	-	96	83.366	Cricetulus_griseus_crigri
ENSVVUG00000006586	PNLDC1	99	88.730	ENSDNOG00000013709	PNLDC1	96	89.258	Dasypus_novemcinctus
ENSVVUG00000006586	PNLDC1	99	81.020	ENSDORG00000011517	Pnldc1	99	88.179	Dipodomys_ordii
ENSVVUG00000006586	PNLDC1	95	78.326	ENSETEG00000007587	PNLDC1	99	77.530	Echinops_telfairi
ENSVVUG00000006586	PNLDC1	99	83.910	ENSEASG00005019029	PNLDC1	96	84.854	Equus_asinus_asinus
ENSVVUG00000006586	PNLDC1	99	93.634	ENSECAG00000012898	PNLDC1	96	94.129	Equus_caballus
ENSVVUG00000006586	PNLDC1	73	87.500	ENSEEUG00000005717	-	86	87.500	Erinaceus_europaeus
ENSVVUG00000006586	PNLDC1	99	95.277	ENSFCAG00000002848	PNLDC1	98	94.455	Felis_catus
ENSVVUG00000006586	PNLDC1	98	58.932	ENSFALG00000012081	PNLDC1	97	58.032	Ficedula_albicollis
ENSVVUG00000006586	PNLDC1	99	85.216	ENSFDAG00000021334	PNLDC1	96	85.519	Fukomys_damarensis
ENSVVUG00000006586	PNLDC1	76	60.212	ENSGALG00000011624	PNLDC1	82	59.382	Gallus_gallus
ENSVVUG00000006586	PNLDC1	98	68.182	ENSGAGG00000015276	PNLDC1	100	67.975	Gopherus_agassizii
ENSVVUG00000006586	PNLDC1	99	87.680	ENSGGOG00000014077	PNLDC1	96	88.454	Gorilla_gorilla
ENSVVUG00000006586	PNLDC1	99	86.448	ENSHGLG00000006889	PNLDC1	96	87.084	Heterocephalus_glaber_female
ENSVVUG00000006586	PNLDC1	99	86.448	ENSHGLG00100018275	PNLDC1	96	87.084	Heterocephalus_glaber_male
ENSVVUG00000006586	PNLDC1	98	91.736	ENSSTOG00000005595	PNLDC1	96	90.802	Ictidomys_tridecemlineatus
ENSVVUG00000006586	PNLDC1	98	79.588	ENSJJAG00000009937	Pnldc1	96	80.431	Jaculus_jaculus
ENSVVUG00000006586	PNLDC1	55	89.299	ENSLAFG00000030189	PNLDC1	92	89.524	Loxodonta_africana
ENSVVUG00000006586	PNLDC1	99	88.090	ENSMFAG00000041296	PNLDC1	96	88.845	Macaca_fascicularis
ENSVVUG00000006586	PNLDC1	99	88.090	ENSMMUG00000004181	PNLDC1	96	88.845	Macaca_mulatta
ENSVVUG00000006586	PNLDC1	99	88.090	ENSMNEG00000034271	PNLDC1	96	88.650	Macaca_nemestrina
ENSVVUG00000006586	PNLDC1	99	83.778	ENSMLEG00000044059	PNLDC1	96	84.932	Mandrillus_leucophaeus
ENSVVUG00000006586	PNLDC1	98	59.588	ENSMGAG00000012470	PNLDC1	94	58.980	Meleagris_gallopavo
ENSVVUG00000006586	PNLDC1	98	66.460	ENSMAUG00000012298	Pnldc1	96	65.953	Mesocricetus_auratus
ENSVVUG00000006586	PNLDC1	99	88.706	ENSMICG00000008021	PNLDC1	96	89.237	Microcebus_murinus
ENSVVUG00000006586	PNLDC1	99	86.503	ENSMOCG00000014287	Pnldc1	96	88.499	Microtus_ochrogaster
ENSVVUG00000006586	PNLDC1	98	78.468	ENSMODG00000007420	PNLDC1	96	77.299	Monodelphis_domestica
ENSVVUG00000006586	PNLDC1	99	86.858	MGP_CAROLIEiJ_G0021045	Pnldc1	96	88.258	Mus_caroli
ENSVVUG00000006586	PNLDC1	99	87.269	ENSMUSG00000073460	Pnldc1	100	91.571	Mus_musculus
ENSVVUG00000006586	PNLDC1	99	87.295	MGP_PahariEiJ_G0023361	Pnldc1	96	88.672	Mus_pahari
ENSVVUG00000006586	PNLDC1	99	86.858	MGP_SPRETEiJ_G0021975	Pnldc1	96	88.454	Mus_spretus
ENSVVUG00000006586	PNLDC1	99	96.502	ENSMPUG00000004920	PNLDC1	96	96.673	Mustela_putorius_furo
ENSVVUG00000006586	PNLDC1	99	90.554	ENSMLUG00000000747	PNLDC1	96	90.607	Myotis_lucifugus
ENSVVUG00000006586	PNLDC1	99	87.680	ENSNGAG00000017714	Pnldc1	96	89.432	Nannospalax_galili
ENSVVUG00000006586	PNLDC1	99	87.269	ENSNLEG00000011282	PNLDC1	95	86.694	Nomascus_leucogenys
ENSVVUG00000006586	PNLDC1	58	68.403	ENSMEUG00000014042	-	100	68.403	Notamacropus_eugenii
ENSVVUG00000006586	PNLDC1	65	64.375	ENSMEUG00000011926	-	64	64.375	Notamacropus_eugenii
ENSVVUG00000006586	PNLDC1	76	83.511	ENSOPRG00000003813	PNLDC1	76	88.636	Ochotona_princeps
ENSVVUG00000006586	PNLDC1	99	84.600	ENSODEG00000008047	PNLDC1	96	85.910	Octodon_degus
ENSVVUG00000006586	PNLDC1	98	59.917	ENSOANG00000012199	PNLDC1	96	60.156	Ornithorhynchus_anatinus
ENSVVUG00000006586	PNLDC1	99	88.090	ENSOCUG00000013867	PNLDC1	96	88.650	Oryctolagus_cuniculus
ENSVVUG00000006586	PNLDC1	98	89.050	ENSOGAG00000007331	PNLDC1	97	89.824	Otolemur_garnettii
ENSVVUG00000006586	PNLDC1	99	89.938	ENSOARG00000004585	PNLDC1	96	91.194	Ovis_aries
ENSVVUG00000006586	PNLDC1	99	87.269	ENSPPAG00000026651	PNLDC1	96	88.063	Pan_paniscus
ENSVVUG00000006586	PNLDC1	99	94.867	ENSPPRG00000012854	PNLDC1	98	94.264	Panthera_pardus
ENSVVUG00000006586	PNLDC1	99	91.992	ENSPTIG00000011501	PNLDC1	97	88.462	Panthera_tigris_altaica
ENSVVUG00000006586	PNLDC1	99	87.269	ENSPTRG00000018762	PNLDC1	96	88.063	Pan_troglodytes
ENSVVUG00000006586	PNLDC1	99	88.090	ENSPANG00000022009	PNLDC1	96	89.041	Papio_anubis
ENSVVUG00000006586	PNLDC1	99	87.474	ENSPEMG00000016301	Pnldc1	96	89.432	Peromyscus_maniculatus_bairdii
ENSVVUG00000006586	PNLDC1	89	79.043	ENSPCIG00000023412	PNLDC1	100	79.043	Phascolarctos_cinereus
ENSVVUG00000006586	PNLDC1	99	81.762	ENSPPYG00000017148	PNLDC1	96	82.812	Pongo_abelii
ENSVVUG00000006586	PNLDC1	98	77.113	ENSPCAG00000014169	PNLDC1	96	78.474	Procavia_capensis
ENSVVUG00000006586	PNLDC1	99	88.296	ENSPCOG00000025722	PNLDC1	96	89.041	Propithecus_coquereli
ENSVVUG00000006586	PNLDC1	69	97.654	ENSPVAG00000005325	PNLDC1	73	97.403	Pteropus_vampyrus
ENSVVUG00000006586	PNLDC1	99	87.064	ENSRNOG00000023140	Pnldc1	99	87.421	Rattus_norvegicus
ENSVVUG00000006586	PNLDC1	99	88.090	ENSRBIG00000033806	PNLDC1	96	88.650	Rhinopithecus_bieti
ENSVVUG00000006586	PNLDC1	99	87.885	ENSRROG00000043919	PNLDC1	93	88.889	Rhinopithecus_roxellana
ENSVVUG00000006586	PNLDC1	99	87.680	ENSSBOG00000019135	PNLDC1	96	88.258	Saimiri_boliviensis_boliviensis
ENSVVUG00000006586	PNLDC1	98	77.847	ENSSHAG00000015192	PNLDC1	94	77.642	Sarcophilus_harrisii
ENSVVUG00000006586	PNLDC1	55	69.630	ENSSPUG00000004627	PNLDC1	99	68.304	Sphenodon_punctatus
ENSVVUG00000006586	PNLDC1	99	90.965	ENSSSCG00000004046	PNLDC1	96	91.224	Sus_scrofa
ENSVVUG00000006586	PNLDC1	98	59.588	ENSTGUG00000011418	PNLDC1	99	59.588	Taeniopygia_guttata
ENSVVUG00000006586	PNLDC1	99	78.029	ENSTBEG00000009131	PNLDC1	94	78.367	Tupaia_belangeri
ENSVVUG00000006586	PNLDC1	69	85.965	ENSTTRG00000010409	PNLDC1	73	86.788	Tursiops_truncatus
ENSVVUG00000006586	PNLDC1	99	81.250	ENSUAMG00000015783	PNLDC1	96	81.958	Ursus_americanus
ENSVVUG00000006586	PNLDC1	99	87.805	ENSUMAG00000011903	PNLDC1	96	87.805	Ursus_maritimus