EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000006934 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: survival motor neuron protein
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 42364 bases
Position: chrNBDQ01000005.1:36480251-36522614
Accession: 112906954
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000009296	SMN	PF06003.12	2.2e-106	1	1
ENSVVUP00000009293	SMN	PF06003.12	9.2e-103	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000012253	-	1865	-	ENSVVUP00000009296	289 (aa)	XP_025837881	UPI0002747F65
ENSVVUT00000012248	-	2154	-	ENSVVUP00000009293	318 (aa)	XP_025837873	UPI000DF72067

Gene Model

Click here to download ENSVVUG00000006934's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000006934's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000006934	-	97	88.612	ENSG00000172062	SMN1	95	88.612	Homo_sapiens
ENSVVUG00000006934	-	97	88.612	ENSG00000205571	SMN2	87	97.500	Homo_sapiens
ENSVVUG00000006934	-	93	51.625	ENSAPOG00000011324	smn1	94	51.613	Acanthochromis_polyacanthus
ENSVVUG00000006934	-	97	93.950	ENSAMEG00000003316	-	96	94.118	Ailuropoda_melanoleuca
ENSVVUG00000006934	-	89	50.566	ENSACIG00000019772	-	97	50.385	Amphilophus_citrinellus
ENSVVUG00000006934	-	93	51.625	ENSAOCG00000024444	smn1	94	51.613	Amphiprion_ocellaris
ENSVVUG00000006934	-	93	51.986	ENSAPEG00000016504	smn1	94	51.971	Amphiprion_percula
ENSVVUG00000006934	-	90	52.593	ENSATEG00000002182	smn1	80	53.160	Anabas_testudineus
ENSVVUG00000006934	-	69	59.091	ENSAPLG00000010912	-	97	58.586	Anas_platyrhynchos
ENSVVUG00000006934	-	99	54.949	ENSACAG00000010017	-	95	60.432	Anolis_carolinensis
ENSVVUG00000006934	-	99	83.673	ENSANAG00000032133	-	95	85.409	Aotus_nancymaae
ENSVVUG00000006934	-	93	51.273	ENSACLG00000007308	smn1	89	53.333	Astatotilapia_calliptera
ENSVVUG00000006934	-	97	86.879	ENSBTAG00000005743	SMN2	98	86.879	Bos_taurus
ENSVVUG00000006934	-	97	85.816	ENSCJAG00000016290	-	95	85.816	Callithrix_jacchus
ENSVVUG00000006934	-	100	100.000	ENSCAFG00000007812	SMN	100	100.000	Canis_familiaris
ENSVVUG00000006934	-	100	99.686	ENSCAFG00020019229	-	98	99.686	Canis_lupus_dingo
ENSVVUG00000006934	-	97	86.972	ENSCHIG00000015559	-	96	86.972	Capra_hircus
ENSVVUG00000006934	-	99	88.502	ENSTSYG00000012058	-	96	89.531	Carlito_syrichta
ENSVVUG00000006934	-	76	69.469	ENSCAPG00000011021	-	100	70.485	Cavia_aperea
ENSVVUG00000006934	-	100	81.570	ENSCPOG00000036973	-	96	82.624	Cavia_porcellus
ENSVVUG00000006934	-	99	81.849	ENSCPOG00000012328	-	97	82.230	Cavia_porcellus
ENSVVUG00000006934	-	97	86.071	ENSCCAG00000018127	-	95	86.071	Cebus_capucinus
ENSVVUG00000006934	-	97	87.544	ENSCATG00000037002	-	95	87.544	Cercocebus_atys
ENSVVUG00000006934	-	100	79.461	ENSCLAG00000000284	-	96	80.986	Chinchilla_lanigera
ENSVVUG00000006934	-	97	87.189	ENSCSAG00000015688	-	95	87.189	Chlorocebus_sabaeus
ENSVVUG00000006934	-	87	78.175	ENSCHOG00000007346	-	100	76.190	Choloepus_hoffmanni
ENSVVUG00000006934	-	99	63.356	ENSCPBG00000010968	-	99	64.925	Chrysemys_picta_bellii
ENSVVUG00000006934	-	97	88.172	ENSCANG00000038242	-	95	88.809	Colobus_angolensis_palliatus
ENSVVUG00000006934	-	95	80.427	ENSCANG00000033324	-	92	82.288	Colobus_angolensis_palliatus
ENSVVUG00000006934	-	100	85.172	ENSCGRG00001017959	-	100	85.172	Cricetulus_griseus_chok1gshd
ENSVVUG00000006934	-	100	67.128	ENSCGRG00001016998	-	100	67.820	Cricetulus_griseus_chok1gshd
ENSVVUG00000006934	-	100	85.172	ENSCGRG00000007698	Smn1	100	85.172	Cricetulus_griseus_crigri
ENSVVUG00000006934	-	93	45.455	ENSCSEG00000015227	smn1	97	50.709	Cynoglossus_semilaevis
ENSVVUG00000006934	-	93	52.190	ENSCVAG00000007498	smn1	94	50.725	Cyprinodon_variegatus
ENSVVUG00000006934	-	94	48.364	ENSDARG00000018494	smn1	96	51.087	Danio_rerio
ENSVVUG00000006934	-	83	87.552	ENSDNOG00000007283	-	100	87.552	Dasypus_novemcinctus
ENSVVUG00000006934	-	79	71.491	ENSDNOG00000045949	-	92	72.146	Dasypus_novemcinctus
ENSVVUG00000006934	-	97	78.648	ENSDORG00000007082	Smn1	95	79.211	Dipodomys_ordii
ENSVVUG00000006934	-	72	72.947	ENSETEG00000001406	-	100	72.947	Echinops_telfairi
ENSVVUG00000006934	-	93	38.333	ENSEBUG00000011902	smn1	95	33.762	Eptatretus_burgeri
ENSVVUG00000006934	-	94	79.710	ENSEASG00005018000	-	91	83.721	Equus_asinus_asinus
ENSVVUG00000006934	-	100	89.003	ENSECAG00000015215	-	100	89.347	Equus_caballus
ENSVVUG00000006934	-	87	81.200	ENSEEUG00000015777	-	100	81.200	Erinaceus_europaeus
ENSVVUG00000006934	-	92	55.797	ENSELUG00000018067	smn1	94	54.122	Esox_lucius
ENSVVUG00000006934	-	100	91.724	ENSFCAG00000028292	SMN	100	91.724	Felis_catus
ENSVVUG00000006934	-	90	63.118	ENSFALG00000012320	-	91	63.118	Ficedula_albicollis
ENSVVUG00000006934	-	100	81.481	ENSFDAG00000017683	-	96	82.517	Fukomys_damarensis
ENSVVUG00000006934	-	62	53.591	ENSFHEG00000018508	smn1	96	51.273	Fundulus_heteroclitus
ENSVVUG00000006934	-	96	49.819	ENSGMOG00000017279	smn1	92	49.091	Gadus_morhua
ENSVVUG00000006934	-	93	61.397	ENSGALG00000002430	SMN	95	61.481	Gallus_gallus
ENSVVUG00000006934	-	93	53.285	ENSGAFG00000009501	smn1	94	52.000	Gambusia_affinis
ENSVVUG00000006934	-	93	53.731	ENSGACG00000010584	smn1	91	52.239	Gasterosteus_aculeatus
ENSVVUG00000006934	-	99	62.414	ENSGAGG00000011374	-	97	63.441	Gopherus_agassizii
ENSVVUG00000006934	-	95	36.765	ENSGAGG00000013639	-	89	38.931	Gopherus_agassizii
ENSVVUG00000006934	-	64	87.500	ENSGGOG00000026704	-	93	86.935	Gorilla_gorilla
ENSVVUG00000006934	-	95	73.913	ENSGGOG00000003872	-	96	78.947	Gorilla_gorilla
ENSVVUG00000006934	-	92	51.661	ENSHBUG00000013987	smn1	94	53.597	Haplochromis_burtoni
ENSVVUG00000006934	-	100	79.110	ENSHGLG00000001905	-	98	80.645	Heterocephalus_glaber_female
ENSVVUG00000006934	-	100	81.818	ENSHGLG00000001018	-	96	82.867	Heterocephalus_glaber_female
ENSVVUG00000006934	-	100	81.818	ENSHGLG00100011252	-	96	82.867	Heterocephalus_glaber_male
ENSVVUG00000006934	-	96	78.571	ENSHGLG00100018676	-	97	80.150	Heterocephalus_glaber_male
ENSVVUG00000006934	-	90	50.000	ENSHCOG00000017136	smn1	88	49.624	Hippocampus_comes
ENSVVUG00000006934	-	94	51.429	ENSIPUG00000012580	smn1	86	52.158	Ictalurus_punctatus
ENSVVUG00000006934	-	91	89.773	ENSSTOG00000012288	-	96	89.474	Ictidomys_tridecemlineatus
ENSVVUG00000006934	-	60	64.943	ENSJJAG00000014853	-	100	65.445	Jaculus_jaculus
ENSVVUG00000006934	-	93	52.536	ENSKMAG00000007239	smn1	96	51.908	Kryptolebias_marmoratus
ENSVVUG00000006934	-	93	52.688	ENSLBEG00000022550	smn1	94	54.412	Labrus_bergylta
ENSVVUG00000006934	-	93	36.268	ENSLACG00000009808	-	90	38.434	Latimeria_chalumnae
ENSVVUG00000006934	-	92	50.923	ENSLOCG00000011339	smn1	94	53.430	Lepisosteus_oculatus
ENSVVUG00000006934	-	100	86.689	ENSLAFG00000003425	-	96	86.689	Loxodonta_africana
ENSVVUG00000006934	-	97	82.918	ENSMFAG00000008812	-	95	83.513	Macaca_fascicularis
ENSVVUG00000006934	-	97	87.900	ENSMFAG00000031523	SMN1	96	87.266	Macaca_fascicularis
ENSVVUG00000006934	-	97	82.206	ENSMMUG00000030594	-	95	82.796	Macaca_mulatta
ENSVVUG00000006934	-	97	87.900	ENSMMUG00000020214	SMN1	95	87.900	Macaca_mulatta
ENSVVUG00000006934	-	97	87.544	ENSMNEG00000035094	-	95	87.687	Macaca_nemestrina
ENSVVUG00000006934	-	76	75.113	ENSMNEG00000036423	-	86	75.113	Macaca_nemestrina
ENSVVUG00000006934	-	97	87.900	ENSMLEG00000041902	-	95	87.900	Mandrillus_leucophaeus
ENSVVUG00000006934	-	92	49.104	ENSMAMG00000011034	smn1	94	50.549	Mastacembelus_armatus
ENSVVUG00000006934	-	92	51.292	ENSMZEG00005013634	smn1	94	53.650	Maylandia_zebra
ENSVVUG00000006934	-	68	57.286	ENSMGAG00000008889	-	95	57.360	Meleagris_gallopavo
ENSVVUG00000006934	-	100	83.448	ENSMAUG00000010262	Smn1	100	83.448	Mesocricetus_auratus
ENSVVUG00000006934	-	97	74.648	ENSMICG00000034708	-	94	88.750	Microcebus_murinus
ENSVVUG00000006934	-	100	83.103	ENSMOCG00000017833	Smn1	100	83.103	Microtus_ochrogaster
ENSVVUG00000006934	-	93	45.455	ENSMMOG00000005504	smn1	95	50.365	Mola_mola
ENSVVUG00000006934	-	98	70.979	ENSMODG00000001436	-	95	72.340	Monodelphis_domestica
ENSVVUG00000006934	-	92	50.549	ENSMALG00000008025	smn1	94	50.357	Monopterus_albus
ENSVVUG00000006934	-	100	83.505	MGP_CAROLIEiJ_G0018836	Smn1	100	83.849	Mus_caroli
ENSVVUG00000006934	-	100	83.505	ENSMUSG00000021645	Smn1	100	83.849	Mus_musculus
ENSVVUG00000006934	-	100	82.007	MGP_PahariEiJ_G0015911	Smn1	100	82.007	Mus_pahari
ENSVVUG00000006934	-	100	82.818	MGP_SPRETEiJ_G0019718	Smn1	100	83.162	Mus_spretus
ENSVVUG00000006934	-	95	94.909	ENSMPUG00000014470	-	98	94.909	Mustela_putorius_furo
ENSVVUG00000006934	-	97	88.235	ENSMLUG00000010603	-	92	88.850	Myotis_lucifugus
ENSVVUG00000006934	-	100	83.448	ENSNGAG00000019833	Smn1	100	83.448	Nannospalax_galili
ENSVVUG00000006934	-	92	53.455	ENSNBRG00000023000	smn1	94	53.791	Neolamprologus_brichardi
ENSVVUG00000006934	-	99	86.986	ENSNLEG00000004454	-	95	87.900	Nomascus_leucogenys
ENSVVUG00000006934	-	78	65.044	ENSMEUG00000011393	-	99	68.122	Notamacropus_eugenii
ENSVVUG00000006934	-	87	80.632	ENSOPRG00000002015	-	100	82.213	Ochotona_princeps
ENSVVUG00000006934	-	95	81.818	ENSODEG00000015976	-	97	81.818	Octodon_degus
ENSVVUG00000006934	-	93	53.069	ENSONIG00000011799	smn1	95	53.405	Oreochromis_niloticus
ENSVVUG00000006934	-	99	63.542	ENSOANG00000001626	-	96	66.909	Ornithorhynchus_anatinus
ENSVVUG00000006934	-	99	81.633	ENSOCUG00000026649	-	95	85.159	Oryctolagus_cuniculus
ENSVVUG00000006934	-	99	78.912	ENSOCUG00000025183	-	96	79.930	Oryctolagus_cuniculus
ENSVVUG00000006934	-	100	86.552	ENSOCUG00000017097	-	95	87.097	Oryctolagus_cuniculus
ENSVVUG00000006934	-	54	60.256	ENSORLG00000010552	smn1	94	51.971	Oryzias_latipes
ENSVVUG00000006934	-	93	52.985	ENSORLG00020007936	smn1	93	51.111	Oryzias_latipes_hni
ENSVVUG00000006934	-	54	59.615	ENSORLG00015022425	smn1	94	51.254	Oryzias_latipes_hsok
ENSVVUG00000006934	-	93	53.986	ENSOMEG00000007824	smn1	94	54.380	Oryzias_melastigma
ENSVVUG00000006934	-	92	76.838	ENSOGAG00000031414	-	94	76.838	Otolemur_garnettii
ENSVVUG00000006934	-	95	84.727	ENSOARG00000005425	-	100	84.727	Ovis_aries
ENSVVUG00000006934	-	97	88.256	ENSPPAG00000036640	-	95	88.256	Pan_paniscus
ENSVVUG00000006934	-	100	92.069	ENSPPRG00000005575	-	100	92.069	Panthera_pardus
ENSVVUG00000006934	-	100	91.753	ENSPTIG00000007745	-	100	91.753	Panthera_tigris_altaica
ENSVVUG00000006934	-	97	87.676	ENSPTRG00000016955	-	95	87.676	Pan_troglodytes
ENSVVUG00000006934	-	96	82.734	ENSPANG00000000253	-	93	83.696	Papio_anubis
ENSVVUG00000006934	-	99	86.986	ENSPANG00000013601	-	95	87.900	Papio_anubis
ENSVVUG00000006934	-	92	51.799	ENSPKIG00000011096	smn1	94	52.060	Paramormyrops_kingsleyae
ENSVVUG00000006934	-	93	60.777	ENSPSIG00000014787	-	90	58.007	Pelodiscus_sinensis
ENSVVUG00000006934	-	93	49.458	ENSPMGG00000012285	smn1	94	49.621	Periophthalmus_magnuspinnatus
ENSVVUG00000006934	-	97	40.830	ENSPMAG00000005004	smn1	91	41.971	Petromyzon_marinus
ENSVVUG00000006934	-	98	70.629	ENSPCIG00000025764	-	97	71.986	Phascolarctos_cinereus
ENSVVUG00000006934	-	93	53.846	ENSPFOG00000007786	smn1	94	53.480	Poecilia_formosa
ENSVVUG00000006934	-	93	54.212	ENSPLAG00000012071	smn1	94	53.846	Poecilia_latipinna
ENSVVUG00000006934	-	93	53.846	ENSPMEG00000017085	smn1	94	53.480	Poecilia_mexicana
ENSVVUG00000006934	-	93	54.745	ENSPREG00000005824	smn1	94	54.212	Poecilia_reticulata
ENSVVUG00000006934	-	92	87.640	ENSPPYG00000015533	-	96	87.640	Pongo_abelii
ENSVVUG00000006934	-	86	55.823	ENSPPYG00000019189	-	99	55.020	Pongo_abelii
ENSVVUG00000006934	-	92	84.444	ENSPCAG00000004187	-	100	84.444	Procavia_capensis
ENSVVUG00000006934	-	90	68.302	ENSPCOG00000022307	-	90	83.251	Propithecus_coquereli
ENSVVUG00000006934	-	97	93.214	ENSPVAG00000005977	-	96	92.883	Pteropus_vampyrus
ENSVVUG00000006934	-	92	53.455	ENSPNYG00000014148	smn1	94	53.791	Pundamilia_nyererei
ENSVVUG00000006934	-	93	48.551	ENSPNAG00000014007	smn1	83	48.754	Pygocentrus_nattereri
ENSVVUG00000006934	-	100	80.756	ENSRNOG00000018067	Smn1	100	80.756	Rattus_norvegicus
ENSVVUG00000006934	-	97	87.544	ENSRBIG00000037052	-	95	88.172	Rhinopithecus_bieti
ENSVVUG00000006934	-	93	74.170	ENSRBIG00000036775	-	91	74.815	Rhinopithecus_bieti
ENSVVUG00000006934	-	97	87.544	ENSRROG00000039399	-	95	88.172	Rhinopithecus_roxellana
ENSVVUG00000006934	-	98	72.632	ENSRROG00000031088	-	95	72.695	Rhinopithecus_roxellana
ENSVVUG00000006934	-	84	78.884	ENSSBOG00000020112	-	87	79.283	Saimiri_boliviensis_boliviensis
ENSVVUG00000006934	-	97	85.305	ENSSBOG00000011665	-	95	85.305	Saimiri_boliviensis_boliviensis
ENSVVUG00000006934	-	100	70.205	ENSSHAG00000001499	-	100	70.036	Sarcophilus_harrisii
ENSVVUG00000006934	-	93	50.542	ENSSFOG00015015507	smn1	94	51.493	Scleropages_formosus
ENSVVUG00000006934	-	93	50.368	ENSSMAG00000007922	smn1	94	52.000	Scophthalmus_maximus
ENSVVUG00000006934	-	93	51.079	ENSSDUG00000018533	smn1	94	50.714	Seriola_dumerili
ENSVVUG00000006934	-	93	51.079	ENSSLDG00000021135	smn1	94	50.714	Seriola_lalandi_dorsalis
ENSVVUG00000006934	-	98	63.158	ENSSPUG00000000373	-	93	66.418	Sphenodon_punctatus
ENSVVUG00000006934	-	93	51.812	ENSSPAG00000004345	smn1	94	50.355	Stegastes_partitus
ENSVVUG00000006934	-	97	67.972	ENSSSCG00000029127	-	94	67.972	Sus_scrofa
ENSVVUG00000006934	-	97	91.135	ENSSSCG00000016970	-	96	91.135	Sus_scrofa
ENSVVUG00000006934	-	74	61.033	ENSSSCG00000033865	-	95	60.185	Sus_scrofa
ENSVVUG00000006934	-	94	60.432	ENSTGUG00000001548	-	96	58.394	Taeniopygia_guttata
ENSVVUG00000006934	-	93	47.584	ENSTRUG00000000736	smn	95	48.201	Takifugu_rubripes
ENSVVUG00000006934	-	93	49.470	ENSTNIG00000009892	smn1	95	48.057	Tetraodon_nigroviridis
ENSVVUG00000006934	-	66	86.979	ENSTBEG00000002399	-	100	87.440	Tupaia_belangeri
ENSVVUG00000006934	-	97	85.765	ENSTTRG00000005080	-	96	86.833	Tursiops_truncatus
ENSVVUG00000006934	-	64	93.478	ENSUAMG00000024947	-	77	92.488	Ursus_americanus
ENSVVUG00000006934	-	97	94.662	ENSUMAG00000007842	-	74	94.810	Ursus_maritimus
ENSVVUG00000006934	-	92	77.068	ENSVPAG00000009887	-	96	77.068	Vicugna_pacos
ENSVVUG00000006934	-	95	54.093	ENSXETG00000018189	smn2	95	54.737	Xenopus_tropicalis
ENSVVUG00000006934	-	91	36.331	ENSXETG00000004912	-	78	59.016	Xenopus_tropicalis
ENSVVUG00000006934	-	93	53.025	ENSXMAG00000001521	smn1	95	51.825	Xiphophorus_maculatus