EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000007064 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6B
Alias: KIAA1093
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 288675 bases
Position: chrNBDQ01000135.1:4456213-4744887
Accession: 112933967
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000009548	FAM83	PF07894.12	8.9e-60	1	1
ENSVVUP00000009629	Ago_hook	PF10427.9	1.2e-19	1	1
ENSVVUP00000009712	Ago_hook	PF10427.9	1.5e-19	1	1
ENSVVUP00000009613	Ago_hook	PF10427.9	1.5e-19	1	1
ENSVVUP00000009729	Ago_hook	PF10427.9	1.5e-19	1	1
ENSVVUP00000009662	Ago_hook	PF10427.9	1.5e-19	1	1
ENSVVUP00000009565	Ago_hook	PF10427.9	1.7e-19	1	1
ENSVVUP00000009686	Ago_hook	PF10427.9	1.9e-19	1	1
ENSVVUP00000009548	Ago_hook	PF10427.9	3.4e-19	1	1
ENSVVUP00000009648	Ago_hook	PF10427.9	1.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000012558	TNRC6B-202	5895	-	ENSVVUP00000009565	1964 (aa)	-	-
ENSVVUT00000012623	TNRC6B-203	5954	-	ENSVVUP00000009613	1871 (aa)	XP_025873074	UPI000DF6B51C
ENSVVUT00000012538	TNRC6B-201	6828	-	ENSVVUP00000009548	2190 (aa)	-	-
ENSVVUT00000012756	TNRC6B-208	5610	-	ENSVVUP00000009712	1869 (aa)	-	-
ENSVVUT00000012691	TNRC6B-206	6250	-	ENSVVUP00000009662	1792 (aa)	-	-
ENSVVUT00000012647	TNRC6B-204	5441	-	ENSVVUP00000009629	1772 (aa)	-	-
ENSVVUT00000012774	TNRC6B-209	5990	-	ENSVVUP00000009729	1720 (aa)	-	-
ENSVVUT00000012724	TNRC6B-207	5337	-	ENSVVUP00000009686	1778 (aa)	-	-
ENSVVUT00000012671	TNRC6B-205	5408	-	ENSVVUP00000009648	1761 (aa)	XP_025873076	UPI000DF6B12B

Gene Model

Click here to download ENSVVUG00000007064's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000007064's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000007064	TNRC6B	80	43.459	ENSVVUG00000015268	TNRC6C	89	49.881
ENSVVUG00000007064	TNRC6B	94	54.404	ENSVVUG00000005380	TNRC6A	98	53.763

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000007064	TNRC6B	98	97.277	ENSG00000100354	TNRC6B	100	100.000	Homo_sapiens
ENSVVUG00000007064	TNRC6B	99	99.298	ENSAMEG00000011025	TNRC6B	100	99.298	Ailuropoda_melanoleuca
ENSVVUG00000007064	TNRC6B	96	87.911	ENSAPLG00000009347	TNRC6B	100	88.087	Anas_platyrhynchos
ENSVVUG00000007064	TNRC6B	99	74.107	ENSACAG00000007281	TNRC6B	99	73.850	Anolis_carolinensis
ENSVVUG00000007064	TNRC6B	98	97.222	ENSANAG00000035042	TNRC6B	100	97.294	Aotus_nancymaae
ENSVVUG00000007064	TNRC6B	86	46.463	ENSAMXG00000008707	tnrc6b	84	46.768	Astyanax_mexicanus
ENSVVUG00000007064	TNRC6B	100	96.854	ENSBTAG00000021076	TNRC6B	100	96.950	Bos_taurus
ENSVVUG00000007064	TNRC6B	97	98.007	ENSCJAG00000002732	TNRC6B	100	99.437	Callithrix_jacchus
ENSVVUG00000007064	TNRC6B	98	99.884	ENSCAFG00000001255	TNRC6B	100	99.884	Canis_familiaris
ENSVVUG00000007064	TNRC6B	100	99.331	ENSCAFG00020002189	TNRC6B	99	99.331	Canis_lupus_dingo
ENSVVUG00000007064	TNRC6B	100	96.992	ENSCHIG00000003491	TNRC6B	100	96.992	Capra_hircus
ENSVVUG00000007064	TNRC6B	98	96.895	ENSTSYG00000011836	TNRC6B	100	96.824	Carlito_syrichta
ENSVVUG00000007064	TNRC6B	100	96.601	ENSCPOG00000005705	TNRC6B	100	96.601	Cavia_porcellus
ENSVVUG00000007064	TNRC6B	98	95.969	ENSCCAG00000019912	TNRC6B	99	95.969	Cebus_capucinus
ENSVVUG00000007064	TNRC6B	98	96.845	ENSCATG00000029291	TNRC6B	100	96.240	Cercocebus_atys
ENSVVUG00000007064	TNRC6B	100	96.435	ENSCLAG00000016942	TNRC6B	100	96.478	Chinchilla_lanigera
ENSVVUG00000007064	TNRC6B	99	92.938	ENSCSAG00000006021	TNRC6B	99	92.994	Chlorocebus_sabaeus
ENSVVUG00000007064	TNRC6B	91	86.250	ENSCPBG00000022932	TNRC6B	99	86.806	Chrysemys_picta_bellii
ENSVVUG00000007064	TNRC6B	99	95.907	ENSCANG00000030776	TNRC6B	100	96.710	Colobus_angolensis_palliatus
ENSVVUG00000007064	TNRC6B	96	95.197	ENSCGRG00001020166	Tnrc6b	99	95.086	Cricetulus_griseus_chok1gshd
ENSVVUG00000007064	TNRC6B	100	95.209	ENSCGRG00000016696	Tnrc6b	99	95.085	Cricetulus_griseus_crigri
ENSVVUG00000007064	TNRC6B	100	96.488	ENSDNOG00000012744	TNRC6B	100	96.488	Dasypus_novemcinctus
ENSVVUG00000007064	TNRC6B	100	96.544	ENSDORG00000003386	Tnrc6b	100	96.586	Dipodomys_ordii
ENSVVUG00000007064	TNRC6B	97	87.776	ENSETEG00000006570	TNRC6B	99	88.184	Echinops_telfairi
ENSVVUG00000007064	TNRC6B	100	98.216	ENSEASG00005005306	TNRC6B	100	97.687	Equus_asinus_asinus
ENSVVUG00000007064	TNRC6B	100	98.879	ENSECAG00000009759	TNRC6B	100	99.500	Equus_caballus
ENSVVUG00000007064	TNRC6B	58	97.436	ENSEEUG00000008690	-	59	97.436	Erinaceus_europaeus
ENSVVUG00000007064	TNRC6B	100	98.987	ENSFCAG00000004791	TNRC6B	100	98.987	Felis_catus
ENSVVUG00000007064	TNRC6B	95	88.647	ENSFALG00000012195	TNRC6B	100	88.647	Ficedula_albicollis
ENSVVUG00000007064	TNRC6B	100	96.657	ENSFDAG00000021368	TNRC6B	100	96.698	Fukomys_damarensis
ENSVVUG00000007064	TNRC6B	99	89.233	ENSGALG00000012050	TNRC6B	97	89.121	Gallus_gallus
ENSVVUG00000007064	TNRC6B	99	88.583	ENSGAGG00000025188	TNRC6B	98	88.501	Gopherus_agassizii
ENSVVUG00000007064	TNRC6B	99	96.357	ENSGGOG00000008444	TNRC6B	100	97.412	Gorilla_gorilla
ENSVVUG00000007064	TNRC6B	100	97.360	ENSHGLG00000009306	TNRC6B	100	96.374	Heterocephalus_glaber_female
ENSVVUG00000007064	TNRC6B	100	96.321	ENSHGLG00100018108	TNRC6B	100	96.311	Heterocephalus_glaber_male
ENSVVUG00000007064	TNRC6B	81	45.759	ENSIPUG00000001515	tnrc6b	95	49.727	Ictalurus_punctatus
ENSVVUG00000007064	TNRC6B	100	96.767	ENSSTOG00000008927	TNRC6B	100	96.806	Ictidomys_tridecemlineatus
ENSVVUG00000007064	TNRC6B	100	95.429	ENSJJAG00000015779	Tnrc6b	100	95.595	Jaculus_jaculus
ENSVVUG00000007064	TNRC6B	99	61.736	ENSLACG00000000628	-	99	62.095	Latimeria_chalumnae
ENSVVUG00000007064	TNRC6B	78	96.090	ENSLAFG00000014473	TNRC6B	100	96.384	Loxodonta_africana
ENSVVUG00000007064	TNRC6B	98	96.845	ENSMFAG00000003862	TNRC6B	100	96.122	Macaca_fascicularis
ENSVVUG00000007064	TNRC6B	100	96.936	ENSMMUG00000021345	TNRC6B	100	97.180	Macaca_mulatta
ENSVVUG00000007064	TNRC6B	99	96.947	ENSMNEG00000042745	TNRC6B	100	96.970	Macaca_nemestrina
ENSVVUG00000007064	TNRC6B	98	97.006	ENSMLEG00000041780	TNRC6B	100	97.180	Mandrillus_leucophaeus
ENSVVUG00000007064	TNRC6B	98	92.219	ENSMGAG00000012333	TNRC6B	97	92.219	Meleagris_gallopavo
ENSVVUG00000007064	TNRC6B	99	94.972	ENSMAUG00000016123	Tnrc6b	98	94.915	Mesocricetus_auratus
ENSVVUG00000007064	TNRC6B	99	97.060	ENSMICG00000014056	TNRC6B	100	97.297	Microcebus_murinus
ENSVVUG00000007064	TNRC6B	97	95.000	ENSMOCG00000020334	Tnrc6b	100	95.000	Microtus_ochrogaster
ENSVVUG00000007064	TNRC6B	100	94.822	MGP_CAROLIEiJ_G0020043	Tnrc6b	100	94.719	Mus_caroli
ENSVVUG00000007064	TNRC6B	100	94.766	ENSMUSG00000047888	Tnrc6b	100	94.664	Mus_musculus
ENSVVUG00000007064	TNRC6B	100	94.429	MGP_PahariEiJ_G0020045	Tnrc6b	100	94.331	Mus_pahari
ENSVVUG00000007064	TNRC6B	100	96.186	MGP_SPRETEiJ_G0020941	Tnrc6b	100	95.147	Mus_spretus
ENSVVUG00000007064	TNRC6B	97	99.049	ENSMPUG00000016442	TNRC6B	100	95.426	Mustela_putorius_furo
ENSVVUG00000007064	TNRC6B	98	97.221	ENSMLUG00000008765	TNRC6B	99	97.221	Myotis_lucifugus
ENSVVUG00000007064	TNRC6B	100	95.326	ENSNGAG00000021294	Tnrc6b	100	95.217	Nannospalax_galili
ENSVVUG00000007064	TNRC6B	87	97.405	ENSNLEG00000015311	TNRC6B	100	97.647	Nomascus_leucogenys
ENSVVUG00000007064	TNRC6B	91	93.949	ENSOPRG00000012054	TNRC6B	88	94.175	Ochotona_princeps
ENSVVUG00000007064	TNRC6B	100	96.826	ENSODEG00000013146	TNRC6B	100	96.865	Octodon_degus
ENSVVUG00000007064	TNRC6B	92	44.199	ENSONIG00000019679	-	99	41.062	Oreochromis_niloticus
ENSVVUG00000007064	TNRC6B	100	96.098	ENSOCUG00000016128	TNRC6B	100	95.870	Oryctolagus_cuniculus
ENSVVUG00000007064	TNRC6B	97	98.007	ENSOGAG00000011096	TNRC6B	99	96.734	Otolemur_garnettii
ENSVVUG00000007064	TNRC6B	100	96.670	ENSOARG00000017238	TNRC6B	100	96.711	Ovis_aries
ENSVVUG00000007064	TNRC6B	98	97.277	ENSPPAG00000028514	TNRC6B	100	97.639	Pan_paniscus
ENSVVUG00000007064	TNRC6B	98	98.911	ENSPPRG00000017741	TNRC6B	100	99.057	Panthera_pardus
ENSVVUG00000007064	TNRC6B	98	94.047	ENSPTIG00000022064	TNRC6B	98	95.609	Panthera_tigris_altaica
ENSVVUG00000007064	TNRC6B	98	97.331	ENSPTRG00000047826	TNRC6B	100	97.412	Pan_troglodytes
ENSVVUG00000007064	TNRC6B	96	91.430	ENSPANG00000009271	TNRC6B	99	91.538	Papio_anubis
ENSVVUG00000007064	TNRC6B	99	88.583	ENSPSIG00000005318	TNRC6B	99	88.245	Pelodiscus_sinensis
ENSVVUG00000007064	TNRC6B	100	94.605	ENSPEMG00000011403	Tnrc6b	100	94.615	Peromyscus_maniculatus_bairdii
ENSVVUG00000007064	TNRC6B	98	87.159	ENSPCIG00000020347	TNRC6B	99	87.617	Phascolarctos_cinereus
ENSVVUG00000007064	TNRC6B	97	42.336	ENSPFOG00000006033	-	89	51.181	Poecilia_formosa
ENSVVUG00000007064	TNRC6B	66	45.146	ENSPLAG00000001418	-	98	38.549	Poecilia_latipinna
ENSVVUG00000007064	TNRC6B	88	44.404	ENSPMEG00000006371	-	56	54.739	Poecilia_mexicana
ENSVVUG00000007064	TNRC6B	98	96.813	ENSPPYG00000011849	TNRC6B	99	96.813	Pongo_abelii
ENSVVUG00000007064	TNRC6B	77	89.174	ENSPCAG00000008739	TNRC6B	77	89.834	Procavia_capensis
ENSVVUG00000007064	TNRC6B	99	96.412	ENSPCOG00000020790	TNRC6B	100	97.650	Propithecus_coquereli
ENSVVUG00000007064	TNRC6B	93	96.707	ENSPVAG00000004975	TNRC6B	94	96.707	Pteropus_vampyrus
ENSVVUG00000007064	TNRC6B	75	44.120	ENSPNAG00000011713	tnrc6b	80	45.303	Pygocentrus_nattereri
ENSVVUG00000007064	TNRC6B	100	94.343	ENSRNOG00000024907	Tnrc6b	100	94.137	Rattus_norvegicus
ENSVVUG00000007064	TNRC6B	98	96.788	ENSRBIG00000035576	TNRC6B	99	96.945	Rhinopithecus_bieti
ENSVVUG00000007064	TNRC6B	99	96.608	ENSRROG00000031135	TNRC6B	100	96.827	Rhinopithecus_roxellana
ENSVVUG00000007064	TNRC6B	97	97.145	ENSSBOG00000029743	TNRC6B	100	97.145	Saimiri_boliviensis_boliviensis
ENSVVUG00000007064	TNRC6B	98	87.895	ENSSHAG00000009692	TNRC6B	99	87.950	Sarcophilus_harrisii
ENSVVUG00000007064	TNRC6B	70	85.621	ENSSARG00000007971	-	70	95.455	Sorex_araneus
ENSVVUG00000007064	TNRC6B	90	88.131	ENSSPUG00000010801	TNRC6B	100	87.656	Sphenodon_punctatus
ENSVVUG00000007064	TNRC6B	100	97.651	ENSSSCG00000000078	TNRC6B	100	97.651	Sus_scrofa
ENSVVUG00000007064	TNRC6B	91	87.811	ENSTGUG00000010138	-	99	87.624	Taeniopygia_guttata
ENSVVUG00000007064	TNRC6B	100	94.668	ENSTTRG00000011465	TNRC6B	98	98.336	Tursiops_truncatus
ENSVVUG00000007064	TNRC6B	100	97.826	ENSUAMG00000007174	TNRC6B	100	97.247	Ursus_americanus
ENSVVUG00000007064	TNRC6B	99	99.378	ENSUMAG00000014336	TNRC6B	100	99.378	Ursus_maritimus
ENSVVUG00000007064	TNRC6B	70	92.121	ENSVPAG00000001467	TNRC6B	75	92.230	Vicugna_pacos