EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000007271 (Gene tree)
Gene ID: -
Gene Symbol: SMARCAD1
Alias: DKFZP762K2015|ETL1|KIAA1122
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 101871 bases
Position: chrNBDQ01000115.1:2021279-2123149
Accession: 112932635
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000009890	ResIII	PF04851.15	8.8e-11	1	1
ENSVVUP00000009923	ResIII	PF04851.15	1.1e-10	1	1
ENSVVUP00000009961	ResIII	PF04851.15	1.3e-10	1	1
ENSVVUP00000009977	ResIII	PF04851.15	6.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000012980	SMARCAD1-201	3081	-	ENSVVUP00000009890	1026 (aa)	XP_025871382	UPI000DF67A1B
ENSVVUT00000013027	SMARCAD1-202	2598	-	ENSVVUP00000009923	865 (aa)	-	-
ENSVVUT00000013085	SMARCAD1-204	2775	-	ENSVVUP00000009977	825 (aa)	-	-
ENSVVUT00000013068	SMARCAD1-203	3840	XM_026015603	ENSVVUP00000009961	841 (aa)	XP_025871388	UPI000DF67C8F

Gene Model

Click here to download ENSVVUG00000007271's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000007271's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000007271	SMARCAD1	63	38.026	ENSVVUG00000022808	HELLS	64	38.026

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000007271	SMARCAD1	100	97.503	ENSG00000163104	SMARCAD1	100	98.490	Homo_sapiens
ENSVVUG00000007271	SMARCAD1	99	62.605	ENSAPOG00000011446	smarcad1a	95	62.535	Acanthochromis_polyacanthus
ENSVVUG00000007271	SMARCAD1	100	99.405	ENSAMEG00000005844	SMARCAD1	100	98.930	Ailuropoda_melanoleuca
ENSVVUG00000007271	SMARCAD1	94	58.172	ENSACIG00000018326	smarcad1a	100	68.401	Amphilophus_citrinellus
ENSVVUG00000007271	SMARCAD1	100	62.605	ENSAOCG00000019762	smarcad1a	96	62.396	Amphiprion_ocellaris
ENSVVUG00000007271	SMARCAD1	100	62.745	ENSAPEG00000003889	smarcad1a	96	62.674	Amphiprion_percula
ENSVVUG00000007271	SMARCAD1	99	62.958	ENSATEG00000015608	smarcad1a	93	62.921	Anabas_testudineus
ENSVVUG00000007271	SMARCAD1	100	75.059	ENSAPLG00000004630	SMARCAD1	100	72.251	Anas_platyrhynchos
ENSVVUG00000007271	SMARCAD1	97	78.992	ENSACAG00000013554	SMARCAD1	100	70.145	Anolis_carolinensis
ENSVVUG00000007271	SMARCAD1	100	97.384	ENSANAG00000020488	SMARCAD1	100	96.019	Aotus_nancymaae
ENSVVUG00000007271	SMARCAD1	99	62.079	ENSACLG00000017063	smarcad1a	100	60.548	Astatotilapia_calliptera
ENSVVUG00000007271	SMARCAD1	85	60.955	ENSAMXG00000015470	smarcad1a	98	60.955	Astyanax_mexicanus
ENSVVUG00000007271	SMARCAD1	95	58.924	ENSAMXG00000019130	smarcad1b	85	59.975	Astyanax_mexicanus
ENSVVUG00000007271	SMARCAD1	100	97.628	ENSBTAG00000017061	SMARCAD1	100	96.699	Bos_taurus
ENSVVUG00000007271	SMARCAD1	72	44.118	WBGene00010845	M03C11.8	73	40.108	Caenorhabditis_elegans
ENSVVUG00000007271	SMARCAD1	100	97.622	ENSCJAG00000006778	SMARCAD1	100	96.304	Callithrix_jacchus
ENSVVUG00000007271	SMARCAD1	100	99.610	ENSCAFG00000010026	SMARCAD1	100	99.610	Canis_familiaris
ENSVVUG00000007271	SMARCAD1	100	99.405	ENSCAFG00020003994	SMARCAD1	100	99.439	Canis_lupus_dingo
ENSVVUG00000007271	SMARCAD1	100	97.979	ENSCHIG00000012905	SMARCAD1	100	96.984	Capra_hircus
ENSVVUG00000007271	SMARCAD1	100	97.503	ENSTSYG00000002706	SMARCAD1	100	96.498	Carlito_syrichta
ENSVVUG00000007271	SMARCAD1	99	82.688	ENSCAPG00000016744	SMARCAD1	96	78.172	Cavia_aperea
ENSVVUG00000007271	SMARCAD1	100	96.195	ENSCPOG00000011398	SMARCAD1	100	93.714	Cavia_porcellus
ENSVVUG00000007271	SMARCAD1	100	97.503	ENSCCAG00000022264	SMARCAD1	100	98.490	Cebus_capucinus
ENSVVUG00000007271	SMARCAD1	100	97.503	ENSCATG00000035663	SMARCAD1	100	96.304	Cercocebus_atys
ENSVVUG00000007271	SMARCAD1	100	97.503	ENSCSAG00000004186	SMARCAD1	100	97.503	Chlorocebus_sabaeus
ENSVVUG00000007271	SMARCAD1	97	82.378	ENSCPBG00000013203	SMARCAD1	100	73.800	Chrysemys_picta_bellii
ENSVVUG00000007271	SMARCAD1	78	50.000	ENSCING00000001688	-	99	50.000	Ciona_intestinalis
ENSVVUG00000007271	SMARCAD1	100	97.384	ENSCANG00000003556	SMARCAD1	100	98.490	Colobus_angolensis_palliatus
ENSVVUG00000007271	SMARCAD1	100	94.174	ENSCGRG00001015056	Smarcad1	100	92.704	Cricetulus_griseus_chok1gshd
ENSVVUG00000007271	SMARCAD1	100	94.174	ENSCGRG00000014087	Smarcad1	100	92.704	Cricetulus_griseus_crigri
ENSVVUG00000007271	SMARCAD1	100	62.099	ENSCSEG00000017903	smarcad1a	98	60.000	Cynoglossus_semilaevis
ENSVVUG00000007271	SMARCAD1	100	59.748	ENSCSEG00000014419	-	96	58.904	Cynoglossus_semilaevis
ENSVVUG00000007271	SMARCAD1	100	54.525	ENSDARG00000014041	smarcad1a	92	55.396	Danio_rerio
ENSVVUG00000007271	SMARCAD1	95	58.303	ENSDARG00000073721	smarcad1b	82	59.518	Danio_rerio
ENSVVUG00000007271	SMARCAD1	100	97.265	ENSDNOG00000000806	-	100	96.304	Dasypus_novemcinctus
ENSVVUG00000007271	SMARCAD1	100	94.768	ENSDORG00000012331	Smarcad1	100	91.950	Dipodomys_ordii
ENSVVUG00000007271	SMARCAD1	76	45.692	FBgn0032157	Etl1	86	43.265	Drosophila_melanogaster
ENSVVUG00000007271	SMARCAD1	76	46.178	ENSEBUG00000003969	smarcad1a	96	46.353	Eptatretus_burgeri
ENSVVUG00000007271	SMARCAD1	100	99.049	ENSEASG00005012382	SMARCAD1	100	97.763	Equus_asinus_asinus
ENSVVUG00000007271	SMARCAD1	100	99.049	ENSECAG00000011562	SMARCAD1	100	97.763	Equus_caballus
ENSVVUG00000007271	SMARCAD1	97	57.423	ENSELUG00000019154	smarcad1b	79	59.207	Esox_lucius
ENSVVUG00000007271	SMARCAD1	100	56.742	ENSELUG00000018535	smarcad1a	100	50.836	Esox_lucius
ENSVVUG00000007271	SMARCAD1	100	98.930	ENSFCAG00000003958	SMARCAD1	100	99.161	Felis_catus
ENSVVUG00000007271	SMARCAD1	99	75.758	ENSFALG00000006089	SMARCAD1	92	75.758	Ficedula_albicollis
ENSVVUG00000007271	SMARCAD1	100	96.076	ENSFDAG00000017027	SMARCAD1	100	94.942	Fukomys_damarensis
ENSVVUG00000007271	SMARCAD1	96	65.321	ENSFHEG00000012778	smarcad1a	88	62.256	Fundulus_heteroclitus
ENSVVUG00000007271	SMARCAD1	100	57.969	ENSGMOG00000018995	smarcad1a	97	57.604	Gadus_morhua
ENSVVUG00000007271	SMARCAD1	93	73.117	ENSGALG00000037339	SMARCAD1	94	73.691	Gallus_gallus
ENSVVUG00000007271	SMARCAD1	90	66.351	ENSGAFG00000013498	smarcad1a	60	66.351	Gambusia_affinis
ENSVVUG00000007271	SMARCAD1	100	58.796	ENSGACG00000007327	smarcad1a	99	58.730	Gasterosteus_aculeatus
ENSVVUG00000007271	SMARCAD1	99	82.098	ENSGAGG00000008582	SMARCAD1	93	82.098	Gopherus_agassizii
ENSVVUG00000007271	SMARCAD1	100	97.622	ENSGGOG00000023001	SMARCAD1	100	96.693	Gorilla_gorilla
ENSVVUG00000007271	SMARCAD1	98	61.938	ENSHBUG00000011042	smarcad1a	89	61.180	Haplochromis_burtoni
ENSVVUG00000007271	SMARCAD1	100	96.314	ENSHGLG00000005070	SMARCAD1	100	94.665	Heterocephalus_glaber_female
ENSVVUG00000007271	SMARCAD1	100	96.314	ENSHGLG00100006812	SMARCAD1	100	94.665	Heterocephalus_glaber_male
ENSVVUG00000007271	SMARCAD1	99	64.075	ENSHCOG00000007848	smarcad1a	98	59.722	Hippocampus_comes
ENSVVUG00000007271	SMARCAD1	99	56.738	ENSIPUG00000022817	smarcad1b	84	59.645	Ictalurus_punctatus
ENSVVUG00000007271	SMARCAD1	89	65.258	ENSIPUG00000000242	smarcad1a	98	51.923	Ictalurus_punctatus
ENSVVUG00000007271	SMARCAD1	100	96.793	ENSSTOG00000001227	SMARCAD1	100	96.113	Ictidomys_tridecemlineatus
ENSVVUG00000007271	SMARCAD1	100	96.195	ENSJJAG00000022342	Smarcad1	100	95.039	Jaculus_jaculus
ENSVVUG00000007271	SMARCAD1	93	64.350	ENSKMAG00000021351	smarcad1a	91	61.142	Kryptolebias_marmoratus
ENSVVUG00000007271	SMARCAD1	93	65.821	ENSLBEG00000008088	smarcad1a	80	62.865	Labrus_bergylta
ENSVVUG00000007271	SMARCAD1	100	61.287	ENSLOCG00000012909	smarcad1a	100	55.908	Lepisosteus_oculatus
ENSVVUG00000007271	SMARCAD1	100	95.244	ENSLAFG00000000040	SMARCAD1	100	94.553	Loxodonta_africana
ENSVVUG00000007271	SMARCAD1	100	97.384	ENSMFAG00000042606	SMARCAD1	99	97.404	Macaca_fascicularis
ENSVVUG00000007271	SMARCAD1	100	97.384	ENSMMUG00000022242	SMARCAD1	99	97.404	Macaca_mulatta
ENSVVUG00000007271	SMARCAD1	100	97.265	ENSMNEG00000038117	SMARCAD1	100	98.322	Macaca_nemestrina
ENSVVUG00000007271	SMARCAD1	100	97.503	ENSMLEG00000038333	SMARCAD1	100	98.490	Mandrillus_leucophaeus
ENSVVUG00000007271	SMARCAD1	99	62.707	ENSMAMG00000000933	smarcad1a	81	62.158	Mastacembelus_armatus
ENSVVUG00000007271	SMARCAD1	97	62.393	ENSMZEG00005005203	smarcad1a	100	60.548	Maylandia_zebra
ENSVVUG00000007271	SMARCAD1	100	67.373	ENSMGAG00000005577	SMARCAD1	100	64.645	Meleagris_gallopavo
ENSVVUG00000007271	SMARCAD1	100	93.936	ENSMAUG00000008417	Smarcad1	100	92.510	Mesocricetus_auratus
ENSVVUG00000007271	SMARCAD1	100	96.560	ENSMICG00000009746	SMARCAD1	100	95.631	Microcebus_murinus
ENSVVUG00000007271	SMARCAD1	100	93.817	ENSMOCG00000017142	Smarcad1	100	92.218	Microtus_ochrogaster
ENSVVUG00000007271	SMARCAD1	94	58.742	ENSMMOG00000000275	smarcad1a	92	64.829	Mola_mola
ENSVVUG00000007271	SMARCAD1	100	85.647	ENSMODG00000019268	SMARCAD1	100	81.503	Monodelphis_domestica
ENSVVUG00000007271	SMARCAD1	100	93.222	MGP_CAROLIEiJ_G0028458	-	77	93.278	Mus_caroli
ENSVVUG00000007271	SMARCAD1	100	92.866	ENSMUSG00000029920	Smarcad1	100	91.351	Mus_musculus
ENSVVUG00000007271	SMARCAD1	100	93.222	MGP_PahariEiJ_G0022198	Smarcad1	100	91.740	Mus_pahari
ENSVVUG00000007271	SMARCAD1	100	92.985	MGP_SPRETEiJ_G0029462	Smarcad1	100	91.448	Mus_spretus
ENSVVUG00000007271	SMARCAD1	100	99.524	ENSMPUG00000002111	SMARCAD1	100	98.930	Mustela_putorius_furo
ENSVVUG00000007271	SMARCAD1	100	94.306	ENSMLUG00000000425	SMARCAD1	100	93.398	Myotis_lucifugus
ENSVVUG00000007271	SMARCAD1	100	95.838	ENSNGAG00000000810	Smarcad1	100	92.996	Nannospalax_galili
ENSVVUG00000007271	SMARCAD1	82	63.018	ENSNBRG00000012749	smarcad1a	85	61.236	Neolamprologus_brichardi
ENSVVUG00000007271	SMARCAD1	100	97.622	ENSNLEG00000014225	SMARCAD1	100	98.490	Nomascus_leucogenys
ENSVVUG00000007271	SMARCAD1	100	95.838	ENSODEG00000004334	SMARCAD1	100	93.786	Octodon_degus
ENSVVUG00000007271	SMARCAD1	77	65.895	ENSONIG00000015059	smarcad1a	100	52.077	Oreochromis_niloticus
ENSVVUG00000007271	SMARCAD1	98	84.541	ENSOANG00000013764	SMARCAD1	100	84.541	Ornithorhynchus_anatinus
ENSVVUG00000007271	SMARCAD1	100	97.146	ENSOCUG00000017283	SMARCAD1	100	96.012	Oryctolagus_cuniculus
ENSVVUG00000007271	SMARCAD1	92	65.361	ENSORLG00000004869	smarcad1a	81	61.464	Oryzias_latipes
ENSVVUG00000007271	SMARCAD1	92	65.361	ENSORLG00020020569	smarcad1a	81	61.433	Oryzias_latipes_hni
ENSVVUG00000007271	SMARCAD1	93	65.211	ENSORLG00015009045	smarcad1a	91	62.079	Oryzias_latipes_hsok
ENSVVUG00000007271	SMARCAD1	96	65.113	ENSOMEG00000023032	smarcad1a	82	61.826	Oryzias_melastigma
ENSVVUG00000007271	SMARCAD1	100	95.611	ENSOGAG00000011444	SMARCAD1	100	94.757	Otolemur_garnettii
ENSVVUG00000007271	SMARCAD1	100	97.979	ENSOARG00000017851	SMARCAD1	100	96.887	Ovis_aries
ENSVVUG00000007271	SMARCAD1	100	97.622	ENSPPAG00000035715	SMARCAD1	100	96.790	Pan_paniscus
ENSVVUG00000007271	SMARCAD1	100	98.811	ENSPPRG00000024756	SMARCAD1	100	99.161	Panthera_pardus
ENSVVUG00000007271	SMARCAD1	100	98.577	ENSPTIG00000017868	SMARCAD1	100	97.670	Panthera_tigris_altaica
ENSVVUG00000007271	SMARCAD1	100	97.622	ENSPTRG00000023126	SMARCAD1	100	98.490	Pan_troglodytes
ENSVVUG00000007271	SMARCAD1	100	95.972	ENSPANG00000019757	SMARCAD1	100	95.053	Papio_anubis
ENSVVUG00000007271	SMARCAD1	97	81.450	ENSPSIG00000010255	SMARCAD1	100	72.945	Pelodiscus_sinensis
ENSVVUG00000007271	SMARCAD1	76	64.230	ENSPMGG00000010735	smarcad1a	95	63.018	Periophthalmus_magnuspinnatus
ENSVVUG00000007271	SMARCAD1	100	81.332	ENSPEMG00000001854	Smarcad1	100	78.307	Peromyscus_maniculatus_bairdii
ENSVVUG00000007271	SMARCAD1	99	52.432	ENSPMAG00000003516	smarcad1a	99	47.574	Petromyzon_marinus
ENSVVUG00000007271	SMARCAD1	94	87.611	ENSPCIG00000008137	SMARCAD1	98	89.011	Phascolarctos_cinereus
ENSVVUG00000007271	SMARCAD1	93	66.303	ENSPFOG00000019116	smarcad1a	77	61.785	Poecilia_formosa
ENSVVUG00000007271	SMARCAD1	93	66.147	ENSPLAG00000000108	smarcad1a	77	61.646	Poecilia_latipinna
ENSVVUG00000007271	SMARCAD1	93	66.303	ENSPMEG00000009155	smarcad1a	77	61.785	Poecilia_mexicana
ENSVVUG00000007271	SMARCAD1	99	63.744	ENSPREG00000018185	smarcad1a	94	61.951	Poecilia_reticulata
ENSVVUG00000007271	SMARCAD1	100	96.916	ENSPPYG00000014935	SMARCAD1	100	95.922	Pongo_abelii
ENSVVUG00000007271	SMARCAD1	78	96.423	ENSPCOG00000020478	SMARCAD1	89	96.423	Propithecus_coquereli
ENSVVUG00000007271	SMARCAD1	100	96.085	ENSPVAG00000001760	SMARCAD1	100	95.243	Pteropus_vampyrus
ENSVVUG00000007271	SMARCAD1	84	61.616	ENSPNYG00000010087	smarcad1a	85	60.900	Pundamilia_nyererei
ENSVVUG00000007271	SMARCAD1	98	57.651	ENSPNAG00000010099	smarcad1b	84	60.000	Pygocentrus_nattereri
ENSVVUG00000007271	SMARCAD1	100	55.632	ENSPNAG00000001663	smarcad1a	100	50.186	Pygocentrus_nattereri
ENSVVUG00000007271	SMARCAD1	100	93.936	ENSRNOG00000006391	Smarcad1	100	92.517	Rattus_norvegicus
ENSVVUG00000007271	SMARCAD1	100	97.503	ENSRBIG00000041989	SMARCAD1	100	96.304	Rhinopithecus_bieti
ENSVVUG00000007271	SMARCAD1	100	97.503	ENSRROG00000035309	SMARCAD1	100	96.304	Rhinopithecus_roxellana
ENSVVUG00000007271	SMARCAD1	100	97.503	ENSSBOG00000032114	SMARCAD1	100	98.490	Saimiri_boliviensis_boliviensis
ENSVVUG00000007271	SMARCAD1	100	86.817	ENSSHAG00000001279	SMARCAD1	100	82.563	Sarcophilus_harrisii
ENSVVUG00000007271	SMARCAD1	100	55.355	ENSSFOG00015016814	smarcad1b	100	50.046	Scleropages_formosus
ENSVVUG00000007271	SMARCAD1	91	57.513	ENSSFOG00015020909	smarcad1a	100	57.513	Scleropages_formosus
ENSVVUG00000007271	SMARCAD1	97	63.688	ENSSMAG00000001326	smarcad1a	84	62.791	Scophthalmus_maximus
ENSVVUG00000007271	SMARCAD1	83	62.784	ENSSDUG00000022338	smarcad1a	84	62.396	Seriola_dumerili
ENSVVUG00000007271	SMARCAD1	92	66.303	ENSSLDG00000024986	smarcad1a	96	61.978	Seriola_lalandi_dorsalis
ENSVVUG00000007271	SMARCAD1	71	84.422	ENSSPUG00000004633	SMARCAD1	100	84.422	Sphenodon_punctatus
ENSVVUG00000007271	SMARCAD1	100	62.693	ENSSPAG00000001970	smarcad1a	96	62.622	Stegastes_partitus
ENSVVUG00000007271	SMARCAD1	100	98.811	ENSSSCG00000009193	SMARCAD1	100	98.811	Sus_scrofa
ENSVVUG00000007271	SMARCAD1	93	77.551	ENSTGUG00000003127	SMARCAD1	100	77.806	Taeniopygia_guttata
ENSVVUG00000007271	SMARCAD1	100	58.087	ENSTNIG00000017585	smarcad1a	99	57.617	Tetraodon_nigroviridis
ENSVVUG00000007271	SMARCAD1	91	96.825	ENSTBEG00000002789	SMARCAD1	91	96.825	Tupaia_belangeri
ENSVVUG00000007271	SMARCAD1	100	98.100	ENSTTRG00000000226	SMARCAD1	100	96.521	Tursiops_truncatus
ENSVVUG00000007271	SMARCAD1	100	99.168	ENSUAMG00000022262	SMARCAD1	100	98.833	Ursus_americanus
ENSVVUG00000007271	SMARCAD1	100	99.168	ENSUMAG00000004549	SMARCAD1	100	98.735	Ursus_maritimus
ENSVVUG00000007271	SMARCAD1	100	65.848	ENSXETG00000019214	smarcad1	100	65.795	Xenopus_tropicalis
ENSVVUG00000007271	SMARCAD1	94	59.331	ENSXCOG00000005232	smarcad1a	98	52.189	Xiphophorus_couchianus
ENSVVUG00000007271	SMARCAD1	100	61.603	ENSXMAG00000015350	smarcad1a	89	61.592	Xiphophorus_maculatus