EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000007299 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 31464 bases
Position: chrNBDQ01000005.1:37247225-37278688
Accession: 112907021
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000009877	MRP-S27	PF10037.9	1.2e-09	1	1
ENSVVUP00000009884	MRP-S27	PF10037.9	7.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000012970	-	447	-	ENSVVUP00000009881	148 (aa)	-	-
ENSVVUT00000012966	-	1152	-	ENSVVUP00000009877	383 (aa)	XP_025837980	UPI000DF6BEE1
ENSVVUT00000012972	-	1086	-	ENSVVUP00000009884	361 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000007299's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000007299's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000007299	-	100	77.023	ENSG00000049883	PTCD2	100	78.818	Homo_sapiens
ENSVVUG00000007299	-	97	43.305	ENSAPOG00000020682	ptcd2	91	47.989	Acanthochromis_polyacanthus
ENSVVUG00000007299	-	100	85.901	ENSAMEG00000007194	PTCD2	99	85.901	Ailuropoda_melanoleuca
ENSVVUG00000007299	-	97	40.000	ENSACIG00000002053	ptcd2	100	42.693	Amphilophus_citrinellus
ENSVVUG00000007299	-	97	43.220	ENSAOCG00000006616	ptcd2	89	47.414	Amphiprion_ocellaris
ENSVVUG00000007299	-	97	43.503	ENSAPEG00000022926	ptcd2	89	47.175	Amphiprion_percula
ENSVVUG00000007299	-	97	58.445	ENSACAG00000009747	PTCD2	90	59.829	Anolis_carolinensis
ENSVVUG00000007299	-	100	79.112	ENSANAG00000029353	PTCD2	99	79.112	Aotus_nancymaae
ENSVVUG00000007299	-	92	48.023	ENSACLG00000027742	ptcd2	89	48.138	Astatotilapia_calliptera
ENSVVUG00000007299	-	90	44.957	ENSAMXG00000029404	ptcd2	92	44.957	Astyanax_mexicanus
ENSVVUG00000007299	-	97	80.108	ENSBTAG00000014675	PTCD2	97	80.108	Bos_taurus
ENSVVUG00000007299	-	100	78.329	ENSCJAG00000016364	PTCD2	99	78.329	Callithrix_jacchus
ENSVVUG00000007299	-	100	98.695	ENSCAFG00000007982	PTCD2	90	98.695	Canis_familiaris
ENSVVUG00000007299	-	90	99.133	ENSCAFG00020019147	PTCD2	97	99.133	Canis_lupus_dingo
ENSVVUG00000007299	-	100	78.906	ENSCHIG00000017118	PTCD2	100	78.906	Capra_hircus
ENSVVUG00000007299	-	100	70.757	ENSCPOG00000040168	PTCD2	100	70.757	Cavia_porcellus
ENSVVUG00000007299	-	78	74.747	ENSCCAG00000021996	-	95	72.403	Cebus_capucinus
ENSVVUG00000007299	-	100	77.546	ENSCCAG00000029389	-	99	77.546	Cebus_capucinus
ENSVVUG00000007299	-	100	75.718	ENSCATG00000019069	PTCD2	100	75.718	Cercocebus_atys
ENSVVUG00000007299	-	100	71.279	ENSCLAG00000000072	PTCD2	100	71.279	Chinchilla_lanigera
ENSVVUG00000007299	-	100	77.807	ENSCSAG00000015623	PTCD2	100	77.807	Chlorocebus_sabaeus
ENSVVUG00000007299	-	90	57.759	ENSCHOG00000010634	PTCD2	100	57.759	Choloepus_hoffmanni
ENSVVUG00000007299	-	99	56.397	ENSCPBG00000000216	PTCD2	90	58.857	Chrysemys_picta_bellii
ENSVVUG00000007299	-	100	76.240	ENSCANG00000035636	PTCD2	99	76.240	Colobus_angolensis_palliatus
ENSVVUG00000007299	-	100	71.279	ENSCGRG00001015289	Ptcd2	84	71.279	Cricetulus_griseus_chok1gshd
ENSVVUG00000007299	-	100	71.279	ENSCGRG00000006193	Ptcd2	84	71.279	Cricetulus_griseus_crigri
ENSVVUG00000007299	-	97	40.720	ENSCVAG00000001285	ptcd2	89	45.977	Cyprinodon_variegatus
ENSVVUG00000007299	-	97	44.772	ENSDARG00000035391	ptcd2	92	45.455	Danio_rerio
ENSVVUG00000007299	-	100	76.240	ENSDNOG00000008719	PTCD2	100	76.240	Dasypus_novemcinctus
ENSVVUG00000007299	-	100	74.160	ENSDORG00000004921	Ptcd2	100	74.160	Dipodomys_ordii
ENSVVUG00000007299	-	100	69.010	ENSETEG00000016542	PTCD2	99	69.010	Echinops_telfairi
ENSVVUG00000007299	-	100	79.896	ENSEASG00005018038	PTCD2	100	79.896	Equus_asinus_asinus
ENSVVUG00000007299	-	100	79.634	ENSECAG00000007022	PTCD2	98	79.634	Equus_caballus
ENSVVUG00000007299	-	100	70.757	ENSEEUG00000014031	PTCD2	99	70.757	Erinaceus_europaeus
ENSVVUG00000007299	-	91	50.712	ENSELUG00000003584	ptcd2	91	50.712	Esox_lucius
ENSVVUG00000007299	-	100	76.240	ENSFCAG00000045432	PTCD2	82	76.240	Felis_catus
ENSVVUG00000007299	-	85	52.905	ENSFALG00000010299	PTCD2	99	52.905	Ficedula_albicollis
ENSVVUG00000007299	-	100	71.802	ENSFDAG00000018461	PTCD2	100	71.802	Fukomys_damarensis
ENSVVUG00000007299	-	97	44.663	ENSGMOG00000003637	ptcd2	91	50.142	Gadus_morhua
ENSVVUG00000007299	-	94	50.970	ENSGALG00000038260	PTCD2	100	49.740	Gallus_gallus
ENSVVUG00000007299	-	99	57.963	ENSGAGG00000021952	PTCD2	90	60.571	Gopherus_agassizii
ENSVVUG00000007299	-	100	77.023	ENSGGOG00000010695	PTCD2	99	77.023	Gorilla_gorilla
ENSVVUG00000007299	-	92	48.023	ENSHBUG00000009191	ptcd2	89	48.138	Haplochromis_burtoni
ENSVVUG00000007299	-	100	71.279	ENSHGLG00000001234	PTCD2	100	71.279	Heterocephalus_glaber_female
ENSVVUG00000007299	-	100	71.279	ENSHGLG00100015419	PTCD2	100	71.279	Heterocephalus_glaber_male
ENSVVUG00000007299	-	93	48.179	ENSHCOG00000001703	ptcd2	90	48.424	Hippocampus_comes
ENSVVUG00000007299	-	85	46.769	ENSIPUG00000006080	ptcd2	90	45.665	Ictalurus_punctatus
ENSVVUG00000007299	-	99	76.178	ENSSTOG00000006596	PTCD2	99	76.178	Ictidomys_tridecemlineatus
ENSVVUG00000007299	-	100	74.151	ENSJJAG00000024388	Ptcd2	100	74.151	Jaculus_jaculus
ENSVVUG00000007299	-	94	44.847	ENSKMAG00000009329	ptcd2	91	45.299	Kryptolebias_marmoratus
ENSVVUG00000007299	-	98	47.340	ENSLBEG00000024871	ptcd2	88	49.280	Labrus_bergylta
ENSVVUG00000007299	-	94	53.463	ENSLOCG00000011122	ptcd2	91	54.416	Lepisosteus_oculatus
ENSVVUG00000007299	-	81	76.527	ENSLAFG00000004115	PTCD2	100	76.527	Loxodonta_africana
ENSVVUG00000007299	-	100	76.501	ENSMFAG00000031516	PTCD2	99	76.501	Macaca_fascicularis
ENSVVUG00000007299	-	100	75.718	ENSMNEG00000007537	PTCD2	100	75.718	Macaca_nemestrina
ENSVVUG00000007299	-	100	75.979	ENSMLEG00000031093	PTCD2	99	75.979	Mandrillus_leucophaeus
ENSVVUG00000007299	-	96	47.268	ENSMAMG00000018529	ptcd2	91	47.989	Mastacembelus_armatus
ENSVVUG00000007299	-	92	48.023	ENSMZEG00005003625	ptcd2	89	48.138	Maylandia_zebra
ENSVVUG00000007299	-	97	46.610	ENSMGAG00000005033	PTCD2	100	52.011	Meleagris_gallopavo
ENSVVUG00000007299	-	100	56.136	ENSMAUG00000020253	Ptcd2	100	56.136	Mesocricetus_auratus
ENSVVUG00000007299	-	100	78.329	ENSMICG00000004535	PTCD2	99	78.329	Microcebus_murinus
ENSVVUG00000007299	-	100	72.585	ENSMOCG00000019985	Ptcd2	100	72.585	Microtus_ochrogaster
ENSVVUG00000007299	-	100	58.594	ENSMODG00000001695	PTCD2	100	58.594	Monodelphis_domestica
ENSVVUG00000007299	-	97	43.296	ENSMALG00000022372	ptcd2	91	48.276	Monopterus_albus
ENSVVUG00000007299	-	100	71.540	MGP_CAROLIEiJ_G0018829	Ptcd2	100	71.540	Mus_caroli
ENSVVUG00000007299	-	100	70.235	ENSMUSG00000021650	Ptcd2	100	70.235	Mus_musculus
ENSVVUG00000007299	-	100	73.890	MGP_PahariEiJ_G0015904	Ptcd2	100	73.890	Mus_pahari
ENSVVUG00000007299	-	100	71.018	MGP_SPRETEiJ_G0019711	Ptcd2	100	71.018	Mus_spretus
ENSVVUG00000007299	-	100	86.945	ENSMPUG00000014401	PTCD2	100	86.945	Mustela_putorius_furo
ENSVVUG00000007299	-	100	79.112	ENSMLUG00000007374	PTCD2	99	79.112	Myotis_lucifugus
ENSVVUG00000007299	-	100	71.802	ENSNGAG00000005027	Ptcd2	100	71.802	Nannospalax_galili
ENSVVUG00000007299	-	92	48.305	ENSNBRG00000008174	ptcd2	91	48.424	Neolamprologus_brichardi
ENSVVUG00000007299	-	93	42.183	ENSNBRG00000000092	-	100	48.036	Neolamprologus_brichardi
ENSVVUG00000007299	-	100	76.762	ENSNLEG00000004516	PTCD2	99	76.762	Nomascus_leucogenys
ENSVVUG00000007299	-	100	47.258	ENSMEUG00000014012	-	65	72.727	Notamacropus_eugenii
ENSVVUG00000007299	-	100	72.324	ENSOPRG00000007290	PTCD2	99	72.324	Ochotona_princeps
ENSVVUG00000007299	-	100	72.063	ENSODEG00000016417	PTCD2	100	72.063	Octodon_degus
ENSVVUG00000007299	-	77	49.660	ENSONIG00000011269	ptcd2	85	49.827	Oreochromis_niloticus
ENSVVUG00000007299	-	95	76.712	ENSOCUG00000007970	PTCD2	100	76.240	Oryctolagus_cuniculus
ENSVVUG00000007299	-	96	46.196	ENSORLG00000003851	ptcd2	88	47.399	Oryzias_latipes
ENSVVUG00000007299	-	96	45.652	ENSORLG00020009823	ptcd2	90	46.821	Oryzias_latipes_hni
ENSVVUG00000007299	-	98	41.436	ENSORLG00015016777	ptcd2	99	46.286	Oryzias_latipes_hsok
ENSVVUG00000007299	-	98	41.061	ENSOMEG00000012396	ptcd2	84	45.665	Oryzias_melastigma
ENSVVUG00000007299	-	100	74.674	ENSOGAG00000008390	PTCD2	99	74.674	Otolemur_garnettii
ENSVVUG00000007299	-	100	78.125	ENSOARG00000005087	PTCD2	99	78.125	Ovis_aries
ENSVVUG00000007299	-	100	77.023	ENSPPAG00000028480	PTCD2	99	77.023	Pan_paniscus
ENSVVUG00000007299	-	100	76.501	ENSPTRG00000016968	PTCD2	99	76.501	Pan_troglodytes
ENSVVUG00000007299	-	90	77.971	ENSPANG00000006611	PTCD2	89	77.971	Papio_anubis
ENSVVUG00000007299	-	92	49.575	ENSPKIG00000019896	ptcd2	92	49.575	Paramormyrops_kingsleyae
ENSVVUG00000007299	-	82	62.342	ENSPSIG00000014559	PTCD2	95	63.725	Pelodiscus_sinensis
ENSVVUG00000007299	-	100	71.169	ENSPEMG00000000884	Ptcd2	100	71.169	Peromyscus_maniculatus_bairdii
ENSVVUG00000007299	-	100	59.896	ENSPCIG00000029047	PTCD2	100	59.896	Phascolarctos_cinereus
ENSVVUG00000007299	-	88	46.131	ENSPLAG00000010456	ptcd2	91	45.977	Poecilia_latipinna
ENSVVUG00000007299	-	97	41.551	ENSPREG00000021797	ptcd2	88	46.264	Poecilia_reticulata
ENSVVUG00000007299	-	100	69.191	ENSPPYG00000015543	PTCD2	99	69.191	Pongo_abelii
ENSVVUG00000007299	-	81	66.343	ENSPCAG00000006806	PTCD2	98	66.343	Procavia_capensis
ENSVVUG00000007299	-	100	76.501	ENSPVAG00000010935	PTCD2	99	76.501	Pteropus_vampyrus
ENSVVUG00000007299	-	92	48.023	ENSPNYG00000003122	ptcd2	89	48.138	Pundamilia_nyererei
ENSVVUG00000007299	-	95	49.728	ENSPNAG00000021490	ptcd2	91	50.857	Pygocentrus_nattereri
ENSVVUG00000007299	-	100	73.629	ENSRNOG00000028403	Ptcd2	100	73.629	Rattus_norvegicus
ENSVVUG00000007299	-	100	73.107	ENSRBIG00000032929	PTCD2	99	73.107	Rhinopithecus_bieti
ENSVVUG00000007299	-	100	77.546	ENSRROG00000000080	PTCD2	100	77.546	Rhinopithecus_roxellana
ENSVVUG00000007299	-	100	76.762	ENSSBOG00000018911	PTCD2	100	76.762	Saimiri_boliviensis_boliviensis
ENSVVUG00000007299	-	100	58.854	ENSSHAG00000003833	PTCD2	99	58.594	Sarcophilus_harrisii
ENSVVUG00000007299	-	97	42.938	ENSSFOG00015015415	ptcd2	84	50.464	Scleropages_formosus
ENSVVUG00000007299	-	97	41.176	ENSSMAG00000010350	ptcd2	90	45.533	Scophthalmus_maximus
ENSVVUG00000007299	-	91	48.703	ENSSDUG00000008142	ptcd2	87	48.703	Seriola_dumerili
ENSVVUG00000007299	-	97	42.978	ENSSLDG00000015284	ptcd2	91	48.703	Seriola_lalandi_dorsalis
ENSVVUG00000007299	-	81	67.638	ENSSARG00000004983	PTCD2	99	67.638	Sorex_araneus
ENSVVUG00000007299	-	100	51.436	ENSSPUG00000000176	PTCD2	96	51.436	Sphenodon_punctatus
ENSVVUG00000007299	-	97	41.026	ENSSPAG00000008591	ptcd2	89	46.264	Stegastes_partitus
ENSVVUG00000007299	-	100	79.896	ENSSSCG00000016975	PTCD2	90	79.896	Sus_scrofa
ENSVVUG00000007299	-	90	53.488	ENSTGUG00000005705	PTCD2	99	53.488	Taeniopygia_guttata
ENSVVUG00000007299	-	100	74.935	ENSTBEG00000016559	PTCD2	99	74.935	Tupaia_belangeri
ENSVVUG00000007299	-	97	80.863	ENSTTRG00000011851	PTCD2	95	80.863	Tursiops_truncatus
ENSVVUG00000007299	-	100	86.423	ENSUAMG00000007583	PTCD2	90	86.423	Ursus_americanus
ENSVVUG00000007299	-	100	86.162	ENSUMAG00000007666	PTCD2	100	86.162	Ursus_maritimus
ENSVVUG00000007299	-	97	80.376	ENSVPAG00000009597	PTCD2	96	80.376	Vicugna_pacos
ENSVVUG00000007299	-	98	51.467	ENSXETG00000031652	PTCD2	92	52.707	Xenopus_tropicalis
ENSVVUG00000007299	-	87	46.084	ENSXMAG00000005940	ptcd2	82	45.402	Xiphophorus_maculatus