EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000007338 (Gene tree)
Gene ID: -
Gene Symbol: TNPO1
Alias: IPO2|KPNB2|MIP|MIP1|TRN
Full Name: transportin 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 90033 bases
Position: chrNBDQ01000005.1:37652425-37742457
Accession: 112907036
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000009940	IBN_N	PF03810.19	8.3e-16	1	1
ENSVVUP00000009925	IBN_N	PF03810.19	8.4e-16	1	1
ENSVVUP00000009913	IBN_N	PF03810.19	1.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000013012	TNPO1-201	3263	-	ENSVVUP00000009913	1075 (aa)	-	-
ENSVVUT00000013029	TNPO1-202	2827	-	ENSVVUP00000009925	902 (aa)	-	-
ENSVVUT00000013044	TNPO1-203	3139	-	ENSVVUP00000009940	890 (aa)	XP_025837991	UPI000000D987

Gene Model

Click here to download ENSVVUG00000007338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000007338's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000007338	TNPO1	99	78.467	ENSVVUG00000023860	TNPO2	99	78.467

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000007338	TNPO1	100	100.000	ENSG00000083312	TNPO1	100	100.000	Homo_sapiens
ENSVVUG00000007338	TNPO1	100	93.820	ENSAPOG00000003453	tnpo1	100	93.820	Acanthochromis_polyacanthus
ENSVVUG00000007338	TNPO1	100	99.109	ENSAMEG00000007147	TNPO1	99	99.113	Ailuropoda_melanoleuca
ENSVVUG00000007338	TNPO1	87	92.894	ENSACIG00000003711	tnpo1	99	93.126	Amphilophus_citrinellus
ENSVVUG00000007338	TNPO1	100	93.933	ENSAOCG00000008154	tnpo1	100	93.933	Amphiprion_ocellaris
ENSVVUG00000007338	TNPO1	100	93.933	ENSAPEG00000001112	tnpo1	100	93.933	Amphiprion_percula
ENSVVUG00000007338	TNPO1	100	93.483	ENSATEG00000010408	tnpo1	100	93.483	Anabas_testudineus
ENSVVUG00000007338	TNPO1	99	92.672	ENSAPLG00000009619	-	97	93.678	Anas_platyrhynchos
ENSVVUG00000007338	TNPO1	100	96.742	ENSACAG00000009599	TNPO1	100	96.742	Anolis_carolinensis
ENSVVUG00000007338	TNPO1	100	88.652	ENSANAG00000025351	-	99	88.690	Aotus_nancymaae
ENSVVUG00000007338	TNPO1	100	64.302	ENSANAG00000027118	-	99	64.080	Aotus_nancymaae
ENSVVUG00000007338	TNPO1	100	99.551	ENSANAG00000022453	-	99	99.551	Aotus_nancymaae
ENSVVUG00000007338	TNPO1	100	91.573	ENSACLG00000027223	tnpo1	100	91.573	Astatotilapia_calliptera
ENSVVUG00000007338	TNPO1	100	92.713	ENSAMXG00000009842	tnpo1	100	92.601	Astyanax_mexicanus
ENSVVUG00000007338	TNPO1	100	99.775	ENSBTAG00000007979	TNPO1	99	99.775	Bos_taurus
ENSVVUG00000007338	TNPO1	100	99.663	ENSCJAG00000016409	TNPO1	99	99.663	Callithrix_jacchus
ENSVVUG00000007338	TNPO1	96	99.767	ENSCAFG00000008081	TNPO1	100	99.767	Canis_familiaris
ENSVVUG00000007338	TNPO1	100	96.854	ENSCAFG00020017397	TNPO1	100	96.854	Canis_lupus_dingo
ENSVVUG00000007338	TNPO1	100	99.663	ENSCHIG00000023462	TNPO1	99	99.663	Capra_hircus
ENSVVUG00000007338	TNPO1	99	95.706	ENSTSYG00000001871	TNPO1	97	98.246	Carlito_syrichta
ENSVVUG00000007338	TNPO1	100	99.551	ENSCCAG00000026472	TNPO1	100	99.551	Cebus_capucinus
ENSVVUG00000007338	TNPO1	100	100.000	ENSCATG00000043792	TNPO1	100	100.000	Cercocebus_atys
ENSVVUG00000007338	TNPO1	100	99.551	ENSCLAG00000016191	TNPO1	100	99.551	Chinchilla_lanigera
ENSVVUG00000007338	TNPO1	100	99.888	ENSCSAG00000015616	TNPO1	99	99.888	Chlorocebus_sabaeus
ENSVVUG00000007338	TNPO1	94	87.008	ENSCHOG00000001746	TNPO1	99	87.008	Choloepus_hoffmanni
ENSVVUG00000007338	TNPO1	100	97.753	ENSCPBG00000000260	TNPO1	97	96.066	Chrysemys_picta_bellii
ENSVVUG00000007338	TNPO1	99	75.421	ENSCSAVG00000010981	-	99	75.421	Ciona_savignyi
ENSVVUG00000007338	TNPO1	100	100.000	ENSCANG00000004353	TNPO1	99	100.000	Colobus_angolensis_palliatus
ENSVVUG00000007338	TNPO1	100	99.663	ENSCGRG00001016580	Tnpo1	99	99.663	Cricetulus_griseus_chok1gshd
ENSVVUG00000007338	TNPO1	96	99.649	ENSCGRG00000010366	Tnpo1	100	99.649	Cricetulus_griseus_crigri
ENSVVUG00000007338	TNPO1	100	92.247	ENSCSEG00000012674	tnpo1	100	92.247	Cynoglossus_semilaevis
ENSVVUG00000007338	TNPO1	100	93.258	ENSCVAG00000001010	tnpo1	100	93.258	Cyprinodon_variegatus
ENSVVUG00000007338	TNPO1	100	92.593	ENSDARG00000035390	tnpo1	100	92.593	Danio_rerio
ENSVVUG00000007338	TNPO1	100	93.617	ENSDNOG00000006647	TNPO1	100	93.638	Dasypus_novemcinctus
ENSVVUG00000007338	TNPO1	93	99.759	ENSDORG00000006476	Tnpo1	100	99.759	Dipodomys_ordii
ENSVVUG00000007338	TNPO1	99	57.788	FBgn0035693	CG8219	99	57.336	Drosophila_melanogaster
ENSVVUG00000007338	TNPO1	86	99.625	ENSETEG00000017805	TNPO1	89	99.625	Echinops_telfairi
ENSVVUG00000007338	TNPO1	94	85.119	ENSEBUG00000001895	tnpo1	100	85.238	Eptatretus_burgeri
ENSVVUG00000007338	TNPO1	100	100.000	ENSEASG00005018055	TNPO1	100	100.000	Equus_asinus_asinus
ENSVVUG00000007338	TNPO1	100	99.775	ENSECAG00000024424	TNPO1	99	99.775	Equus_caballus
ENSVVUG00000007338	TNPO1	100	86.601	ENSELUG00000002821	tnpo1	100	86.009	Esox_lucius
ENSVVUG00000007338	TNPO1	100	100.000	ENSFCAG00000013181	TNPO1	100	100.000	Felis_catus
ENSVVUG00000007338	TNPO1	100	97.416	ENSFALG00000010292	TNPO1	100	97.416	Ficedula_albicollis
ENSVVUG00000007338	TNPO1	100	99.663	ENSFDAG00000013345	TNPO1	99	99.663	Fukomys_damarensis
ENSVVUG00000007338	TNPO1	100	93.603	ENSFHEG00000019234	tnpo1	100	93.603	Fundulus_heteroclitus
ENSVVUG00000007338	TNPO1	100	90.034	ENSGMOG00000000347	tnpo1	99	90.034	Gadus_morhua
ENSVVUG00000007338	TNPO1	100	96.742	ENSGALG00000015014	TNPO1	100	96.742	Gallus_gallus
ENSVVUG00000007338	TNPO1	100	92.377	ENSGAFG00000000943	tnpo1	100	92.377	Gambusia_affinis
ENSVVUG00000007338	TNPO1	100	93.146	ENSGACG00000015841	tnpo1	99	93.146	Gasterosteus_aculeatus
ENSVVUG00000007338	TNPO1	100	97.528	ENSGAGG00000013419	TNPO1	100	97.528	Gopherus_agassizii
ENSVVUG00000007338	TNPO1	100	100.000	ENSGGOG00000026800	TNPO1	100	100.000	Gorilla_gorilla
ENSVVUG00000007338	TNPO1	100	83.184	ENSGGOG00000022535	-	99	83.017	Gorilla_gorilla
ENSVVUG00000007338	TNPO1	100	93.146	ENSHBUG00000008068	tnpo1	100	93.146	Haplochromis_burtoni
ENSVVUG00000007338	TNPO1	100	99.326	ENSHGLG00000000970	-	99	99.326	Heterocephalus_glaber_female
ENSVVUG00000007338	TNPO1	96	99.182	ENSHGLG00100017090	-	99	99.182	Heterocephalus_glaber_male
ENSVVUG00000007338	TNPO1	97	77.791	ENSHGLG00100000963	-	99	77.209	Heterocephalus_glaber_male
ENSVVUG00000007338	TNPO1	100	99.775	ENSJJAG00000010244	Tnpo1	97	99.776	Jaculus_jaculus
ENSVVUG00000007338	TNPO1	100	93.596	ENSKMAG00000018195	tnpo1	100	93.596	Kryptolebias_marmoratus
ENSVVUG00000007338	TNPO1	91	90.136	ENSLBEG00000009521	tnpo1	96	90.136	Labrus_bergylta
ENSVVUG00000007338	TNPO1	96	89.186	ENSLACG00000012199	TNPO1	100	89.186	Latimeria_chalumnae
ENSVVUG00000007338	TNPO1	100	95.393	ENSLOCG00000011092	tnpo1	98	95.414	Lepisosteus_oculatus
ENSVVUG00000007338	TNPO1	97	99.192	ENSLAFG00000011796	TNPO1	100	99.192	Loxodonta_africana
ENSVVUG00000007338	TNPO1	100	100.000	ENSMFAG00000003636	TNPO1	99	100.000	Macaca_fascicularis
ENSVVUG00000007338	TNPO1	100	99.888	ENSMMUG00000020923	TNPO1	99	99.888	Macaca_mulatta
ENSVVUG00000007338	TNPO1	100	100.000	ENSMNEG00000044581	TNPO1	99	100.000	Macaca_nemestrina
ENSVVUG00000007338	TNPO1	100	100.000	ENSMLEG00000030740	TNPO1	99	100.000	Mandrillus_leucophaeus
ENSVVUG00000007338	TNPO1	100	93.483	ENSMAMG00000001357	tnpo1	100	93.483	Mastacembelus_armatus
ENSVVUG00000007338	TNPO1	100	92.921	ENSMZEG00005004913	tnpo1	100	92.921	Maylandia_zebra
ENSVVUG00000007338	TNPO1	100	99.663	ENSMAUG00000020550	Tnpo1	100	100.000	Mesocricetus_auratus
ENSVVUG00000007338	TNPO1	100	95.843	ENSMICG00000008468	TNPO1	99	95.857	Microcebus_murinus
ENSVVUG00000007338	TNPO1	100	99.663	ENSMOCG00000009301	Tnpo1	99	99.664	Microtus_ochrogaster
ENSVVUG00000007338	TNPO1	87	92.526	ENSMMOG00000005551	tnpo1	99	92.755	Mola_mola
ENSVVUG00000007338	TNPO1	99	97.872	ENSMODG00000001721	TNPO1	80	97.872	Monodelphis_domestica
ENSVVUG00000007338	TNPO1	100	92.360	ENSMALG00000009782	tnpo1	100	92.360	Monopterus_albus
ENSVVUG00000007338	TNPO1	100	99.438	MGP_CAROLIEiJ_G0018826	Tnpo1	100	100.000	Mus_caroli
ENSVVUG00000007338	TNPO1	100	99.663	ENSMUSG00000009470	Tnpo1	100	100.000	Mus_musculus
ENSVVUG00000007338	TNPO1	100	99.551	MGP_PahariEiJ_G0015901	Tnpo1	100	100.000	Mus_pahari
ENSVVUG00000007338	TNPO1	100	99.438	MGP_SPRETEiJ_G0019708	Tnpo1	100	100.000	Mus_spretus
ENSVVUG00000007338	TNPO1	100	99.888	ENSMPUG00000014387	TNPO1	99	99.888	Mustela_putorius_furo
ENSVVUG00000007338	TNPO1	96	99.302	ENSMLUG00000016317	TNPO1	100	99.302	Myotis_lucifugus
ENSVVUG00000007338	TNPO1	100	99.663	ENSNGAG00000021263	Tnpo1	99	99.664	Nannospalax_galili
ENSVVUG00000007338	TNPO1	87	92.765	ENSNBRG00000009998	tnpo1	99	92.996	Neolamprologus_brichardi
ENSVVUG00000007338	TNPO1	100	100.000	ENSNLEG00000004572	TNPO1	100	100.000	Nomascus_leucogenys
ENSVVUG00000007338	TNPO1	90	94.249	ENSOPRG00000012390	TNPO1	89	94.249	Ochotona_princeps
ENSVVUG00000007338	TNPO1	100	99.326	ENSODEG00000001771	TNPO1	99	99.326	Octodon_degus
ENSVVUG00000007338	TNPO1	100	92.411	ENSONIG00000011151	tnpo1	99	92.411	Oreochromis_niloticus
ENSVVUG00000007338	TNPO1	92	97.927	ENSOANG00000015785	TNPO1	100	97.927	Ornithorhynchus_anatinus
ENSVVUG00000007338	TNPO1	96	93.224	ENSOCUG00000013318	TNPO1	100	93.224	Oryctolagus_cuniculus
ENSVVUG00000007338	TNPO1	87	92.737	ENSORLG00000003182	tnpo1	99	92.969	Oryzias_latipes
ENSVVUG00000007338	TNPO1	99	93.010	ENSORLG00020011559	tnpo1	99	93.010	Oryzias_latipes_hni
ENSVVUG00000007338	TNPO1	99	93.123	ENSORLG00015019113	tnpo1	99	93.123	Oryzias_latipes_hsok
ENSVVUG00000007338	TNPO1	99	93.010	ENSOMEG00000014567	tnpo1	99	93.010	Oryzias_melastigma
ENSVVUG00000007338	TNPO1	100	99.888	ENSOGAG00000000808	TNPO1	99	99.888	Otolemur_garnettii
ENSVVUG00000007338	TNPO1	100	99.775	ENSOARG00000005038	TNPO1	96	87.867	Ovis_aries
ENSVVUG00000007338	TNPO1	100	100.000	ENSPPAG00000042518	TNPO1	99	100.000	Pan_paniscus
ENSVVUG00000007338	TNPO1	100	100.000	ENSPPRG00000022336	TNPO1	100	100.000	Panthera_pardus
ENSVVUG00000007338	TNPO1	100	100.000	ENSPTIG00000018839	TNPO1	100	100.000	Panthera_tigris_altaica
ENSVVUG00000007338	TNPO1	94	87.017	ENSPTRG00000047731	-	100	87.017	Pan_troglodytes
ENSVVUG00000007338	TNPO1	100	100.000	ENSPTRG00000016972	TNPO1	99	100.000	Pan_troglodytes
ENSVVUG00000007338	TNPO1	100	100.000	ENSPANG00000006074	TNPO1	99	100.000	Papio_anubis
ENSVVUG00000007338	TNPO1	100	90.562	ENSPKIG00000019795	tnpo1	100	90.562	Paramormyrops_kingsleyae
ENSVVUG00000007338	TNPO1	100	97.416	ENSPSIG00000014366	TNPO1	99	97.419	Pelodiscus_sinensis
ENSVVUG00000007338	TNPO1	100	90.460	ENSPMGG00000017014	tnpo1	100	90.572	Periophthalmus_magnuspinnatus
ENSVVUG00000007338	TNPO1	96	99.649	ENSPEMG00000007444	Tnpo1	100	99.649	Peromyscus_maniculatus_bairdii
ENSVVUG00000007338	TNPO1	100	98.315	ENSPCIG00000026080	TNPO1	100	98.315	Phascolarctos_cinereus
ENSVVUG00000007338	TNPO1	100	93.169	ENSPFOG00000011447	tnpo1	100	93.169	Poecilia_formosa
ENSVVUG00000007338	TNPO1	100	93.169	ENSPLAG00000018696	tnpo1	100	93.169	Poecilia_latipinna
ENSVVUG00000007338	TNPO1	100	93.371	ENSPMEG00000024121	tnpo1	100	93.371	Poecilia_mexicana
ENSVVUG00000007338	TNPO1	100	93.274	ENSPREG00000020705	tnpo1	100	93.274	Poecilia_reticulata
ENSVVUG00000007338	TNPO1	100	99.888	ENSPPYG00000015545	TNPO1	99	99.888	Pongo_abelii
ENSVVUG00000007338	TNPO1	100	99.888	ENSPCOG00000004254	TNPO1	99	99.888	Propithecus_coquereli
ENSVVUG00000007338	TNPO1	100	99.663	ENSPVAG00000013051	TNPO1	99	99.663	Pteropus_vampyrus
ENSVVUG00000007338	TNPO1	100	92.929	ENSPNYG00000001522	tnpo1	100	92.929	Pundamilia_nyererei
ENSVVUG00000007338	TNPO1	100	92.161	ENSPNAG00000021484	tnpo1	100	92.825	Pygocentrus_nattereri
ENSVVUG00000007338	TNPO1	100	99.438	ENSRNOG00000014999	Tnpo1	100	99.438	Rattus_norvegicus
ENSVVUG00000007338	TNPO1	100	100.000	ENSRBIG00000021642	TNPO1	100	100.000	Rhinopithecus_bieti
ENSVVUG00000007338	TNPO1	100	100.000	ENSRROG00000035271	TNPO1	99	100.000	Rhinopithecus_roxellana
ENSVVUG00000007338	TNPO1	100	99.663	ENSSBOG00000029256	TNPO1	100	99.663	Saimiri_boliviensis_boliviensis
ENSVVUG00000007338	TNPO1	97	97.801	ENSSHAG00000007120	TNPO1	100	97.801	Sarcophilus_harrisii
ENSVVUG00000007338	TNPO1	100	94.501	ENSSFOG00015015448	tnpo1	100	94.501	Scleropages_formosus
ENSVVUG00000007338	TNPO1	96	93.458	ENSSMAG00000011202	tnpo1	97	93.458	Scophthalmus_maximus
ENSVVUG00000007338	TNPO1	100	93.820	ENSSDUG00000007943	tnpo1	100	93.820	Seriola_dumerili
ENSVVUG00000007338	TNPO1	100	93.820	ENSSLDG00000014578	tnpo1	100	93.820	Seriola_lalandi_dorsalis
ENSVVUG00000007338	TNPO1	100	96.629	ENSSPUG00000000149	TNPO1	100	96.629	Sphenodon_punctatus
ENSVVUG00000007338	TNPO1	100	93.933	ENSSPAG00000000258	tnpo1	100	93.933	Stegastes_partitus
ENSVVUG00000007338	TNPO1	100	99.888	ENSSSCG00000027293	TNPO1	100	99.888	Sus_scrofa
ENSVVUG00000007338	TNPO1	99	95.201	ENSTGUG00000005729	TNPO1	100	95.201	Taeniopygia_guttata
ENSVVUG00000007338	TNPO1	100	92.921	ENSTRUG00000018491	tnpo1	100	92.921	Takifugu_rubripes
ENSVVUG00000007338	TNPO1	69	88.799	ENSTNIG00000007483	tnpo1	100	88.799	Tetraodon_nigroviridis
ENSVVUG00000007338	TNPO1	87	100.000	ENSTBEG00000007848	TNPO1	86	100.000	Tupaia_belangeri
ENSVVUG00000007338	TNPO1	96	95.906	ENSTTRG00000000209	TNPO1	95	95.906	Tursiops_truncatus
ENSVVUG00000007338	TNPO1	100	100.000	ENSUMAG00000007635	TNPO1	100	100.000	Ursus_maritimus
ENSVVUG00000007338	TNPO1	100	95.955	ENSVPAG00000009601	TNPO1	99	95.955	Vicugna_pacos
ENSVVUG00000007338	TNPO1	100	94.382	ENSXETG00000016812	tnpo1	99	94.382	Xenopus_tropicalis
ENSVVUG00000007338	TNPO1	100	93.042	ENSXMAG00000005440	tnpo1	100	93.042	Xiphophorus_maculatus